MGE detailed information
MGE type: Genomic_island MGE length: 13067 bp
Accession: NZ_CP101858 Location: 2410393..2423459 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Accession: NZ_CP101858 Location: 2410393..2423459 Organism: Escherichia coli strain LP50-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPX80_RS11695 (2406718) | 2406718..2407926 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| NPX80_RS11700 (2407952) | 2407952..2409283 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| NPX80_RS11705 (2409305) | 2409305..2410294 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NPX80_RS11710 (2410393) | 2410393..2411331 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NPX80_RS11715 (2411646) | 2411646..2411864 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| NPX80_RS11720 (2412120) | 2412120..2412659 | + | 540 | WP_000675743.1 | protein YhaB | - |
| NPX80_RS11725 (2412681) | 2412681..2413868 | + | 1188 | WP_000075593.1 | YhaC family protein | - |
| NPX80_RS11730 (2414206) | 2414206..2415186 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| NPX80_RS11740 (2416283) | 2416283..2417428 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| NPX80_RS11745 (2417525) | 2417525..2418415 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NPX80_RS11750 (2418445) | 2418445..2419215 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NPX80_RS11755 (2419231) | 2419231..2420565 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NPX80_RS11760 (2420940) | 2420940..2422511 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| NPX80_RS11765 (2422660) | 2422660..2422995 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NPX80_RS11770 (2422995) | 2422995..2423459 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NPX80_RS11775 (2423514) | 2423514..2424323 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NPX80_RS11780 (2424572) | 2424572..2425852 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NPX80_RS11785 (2425875) | 2425875..2426348 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NPX80_RS11790 (2426359) | 2426359..2427138 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NPX80_RS11795 (2427128) | 2427128..2428006 | + | 879 | WP_001315856.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NPX80_RS11800 (2428024) | 2428024..2428458 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|