MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61658 bp
Accession: NZ_CP101844 Location: 1908422..1970079 Organism: Streptococcus suis strain 2018WUSS151 Replicon: chromosome
Accession: NZ_CP101844 Location: 1908422..1970079 Organism: Streptococcus suis strain 2018WUSS151 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOV99_RS09360 (NOV99_09360) | 1904218..1904391 | + | 174 | WP_000726045.1 | hypothetical protein | - |
| NOV99_RS09365 (NOV99_09365) | 1904388..1905206 | + | 819 | WP_226317490.1 | replication initiator protein A | - |
| NOV99_RS09370 (NOV99_09370) | 1905355..1906710 | + | 1356 | WP_226317491.1 | DNA (cytosine-5-)-methyltransferase | - |
| NOV99_RS09375 (NOV99_09375) | 1906694..1907122 | + | 429 | WP_011922469.1 | hypothetical protein | - |
| NOV99_RS09380 (NOV99_09380) | 1907133..1907516 | + | 384 | WP_024380710.1 | arsenate reductase | - |
| NOV99_RS09385 (NOV99_09385) | 1907525..1907758 | + | 234 | WP_001005705.1 | hypothetical protein | - |
| NOV99_RS09390 (NOV99_09390) | 1907761..1908345 | + | 585 | WP_226317493.1 | CPBP family intramembrane metalloprotease | - |
| NOV99_RS09395 (NOV99_09395) | 1908422..1908910 | + | 489 | WP_002936460.1 | hypothetical protein | - |
| NOV99_RS09400 (NOV99_09400) | 1908910..1910727 | + | 1818 | WP_226317496.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NOV99_RS09405 (NOV99_09405) | 1910745..1910987 | + | 243 | WP_001072171.1 | hypothetical protein | - |
| NOV99_RS09410 (NOV99_09410) | 1911006..1911860 | + | 855 | WP_001872352.1 | conjugal transfer protein TrbL | - |
| NOV99_RS09415 (NOV99_09415) | 1911922..1912275 | + | 354 | WP_001097579.1 | PrgI family protein | - |
| NOV99_RS09420 (NOV99_09420) | 1912232..1914583 | + | 2352 | WP_000734144.1 | hypothetical protein | - |
| NOV99_RS09425 (NOV99_09425) | 1914585..1917386 | + | 2802 | WP_000656693.1 | phage tail tip lysozyme | - |
| NOV99_RS09430 (NOV99_09430) | 1917449..1918294 | - | 846 | WP_001030299.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NOV99_RS09435 (NOV99_09435) | 1918291..1918881 | - | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NOV99_RS09440 (NOV99_09440) | 1919160..1924055 | + | 4896 | WP_204101639.1 | hypothetical protein | VF |
| NOV99_RS09445 (NOV99_09445) | 1924056..1924247 | + | 192 | WP_001068448.1 | calcium-binding protein | - |
| NOV99_RS09450 (NOV99_09450) | 1924231..1924782 | + | 552 | WP_000312468.1 | hypothetical protein | - |
| NOV99_RS09455 (NOV99_09455) | 1924832..1930273 | + | 5442 | WP_001890950.1 | SNF2-related protein | - |
| NOV99_RS09460 (NOV99_09460) | 1930771..1932549 | + | 1779 | WP_001258309.1 | reverse transcriptase/maturase family protein | - |
| NOV99_RS09465 (NOV99_09465) | 1932642..1933109 | + | 468 | Protein_1837 | helicase | - |
| NOV99_RS09470 (NOV99_09470) | 1933674..1935485 | + | 1812 | WP_204101699.1 | group II intron reverse transcriptase/maturase | - |
| NOV99_RS09475 (NOV99_09475) | 1935590..1936537 | + | 948 | Protein_1839 | helicase | - |
| NOV99_RS09480 (NOV99_09480) | 1936608..1936907 | + | 300 | WP_000169469.1 | DUF5962 family protein | - |
| NOV99_RS09485 (NOV99_09485) | 1936921..1937211 | + | 291 | WP_000893083.1 | DUF5966 family protein | - |
| NOV99_RS09490 (NOV99_09490) | 1937306..1938037 | + | 732 | WP_000933067.1 | hypothetical protein | - |
| NOV99_RS09495 (NOV99_09495) | 1937977..1938351 | + | 375 | WP_001129922.1 | TnpV protein | - |
| NOV99_RS09500 (NOV99_09500) | 1938718..1940637 | + | 1920 | WP_201308469.1 | tetracycline resistance ribosomal protection protein Tet(O) | VF |
| NOV99_RS09505 (NOV99_09505) | 1940692..1940862 | + | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| NOV99_RS09510 (NOV99_09510) | 1941350..1941862 | + | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| NOV99_RS09515 (NOV99_09515) | 1941957..1942382 | + | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| NOV99_RS09520 (NOV99_09520) | 1942727..1942843 | + | 117 | Protein_1848 | RNA polymerase subunit sigma | - |
| NOV99_RS09525 (NOV99_09525) | 1943095..1944120 | + | 1026 | WP_014636623.1 | AAA family ATPase | - |
| NOV99_RS09530 (NOV99_09530) | 1944627..1945592 | + | 966 | WP_001820668.1 | MobV family relaxase | - |
| NOV99_RS09535 (NOV99_09535) | 1945601..1946455 | + | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| NOV99_RS09540 (NOV99_09540) | 1946501..1946731 | + | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| NOV99_RS09545 (NOV99_09545) | 1946731..1946994 | + | 264 | WP_240020616.1 | stage II sporulation protein R | - |
| NOV99_RS09550 (NOV99_09550) | 1947049..1947225 | + | 177 | WP_002935078.1 | hypothetical protein | - |
| NOV99_RS09555 (NOV99_09555) | 1947239..1947499 | - | 261 | Protein_1855 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| NOV99_RS09560 (NOV99_09560) | 1947669..1948406 | - | 738 | WP_002321849.1 | rRNA adenine N-6-methyltransferase | ARG |
| NOV99_RS09565 (NOV99_09565) | 1948444..1948599 | - | 156 | Protein_1857 | antitoxin | - |
| NOV99_RS09570 (NOV99_09570) | 1948616..1948831 | - | 216 | WP_002321610.1 | peptide-binding protein | - |
| NOV99_RS09575 (NOV99_09575) | 1948923..1949819 | - | 897 | WP_001809760.1 | ParA family protein | - |
| NOV99_RS09580 (NOV99_09580) | 1949910..1951553 | + | 1644 | WP_004607528.1 | hypothetical protein ; Integrase | Integrase |
| NOV99_RS09585 (NOV99_09585) | 1951617..1952717 | + | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
| NOV99_RS09590 (NOV99_09590) | 1952745..1952972 | + | 228 | WP_000110922.1 | DUF5965 family protein | - |
| NOV99_RS09595 (NOV99_09595) | 1952969..1953358 | + | 390 | WP_000048066.1 | DUF5945 family protein | - |
| NOV99_RS09600 (NOV99_09600) | 1953409..1953699 | + | 291 | WP_000667951.1 | hypothetical protein | - |
| NOV99_RS09605 (NOV99_09605) | 1953769..1954245 | + | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| NOV99_RS09610 (NOV99_09610) | 1954245..1955012 | + | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| NOV99_RS09615 (NOV99_09615) | 1955013..1957556 | + | 2544 | WP_000601012.1 | AAA family ATPase | - |
| NOV99_RS09620 (NOV99_09620) | 1957894..1958256 | + | 363 | WP_000140674.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| NOV99_RS09625 (NOV99_09625) | 1958259..1958624 | + | 366 | WP_000431640.1 | MobC family plasmid mobilization relaxosome protein | - |
| NOV99_RS09630 (NOV99_09630) | 1958611..1960494 | + | 1884 | WP_000261812.1 | SAG1250 family conjugative relaxase | - |
| NOV99_RS09635 (NOV99_09635) | 1960591..1961964 | + | 1374 | WP_000719507.1 | S8 family serine peptidase | - |
| NOV99_RS09640 (NOV99_09640) | 1962005..1962703 | + | 699 | WP_000276751.1 | Sensory transduction protein regX3 | VF |
| NOV99_RS09645 (NOV99_09645) | 1962681..1964024 | + | 1344 | WP_000977993.1 | HAMP domain-containing sensor histidine kinase | - |
| NOV99_RS09650 (NOV99_09650) | 1964214..1964915 | + | 702 | WP_000452012.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| NOV99_RS09655 (NOV99_09655) | 1964908..1965645 | + | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| NOV99_RS09660 (NOV99_09660) | 1965623..1966309 | + | 687 | WP_001033677.1 | hypothetical protein | - |
| NOV99_RS09665 (NOV99_09665) | 1966432..1967148 | + | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NOV99_RS09670 (NOV99_09670) | 1967416..1967820 | + | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| NOV99_RS09675 (NOV99_09675) | 1968325..1970079 | + | 1755 | WP_105152463.1 | hypothetical protein ; Integrase | Integrase |
| NOV99_RS09680 (NOV99_09680) | 1970184..1970443 | - | 260 | Protein_1880 | transposase family protein | - |
| NOV99_RS09685 (NOV99_09685) | 1970669..1971781 | + | 1113 | WP_002938616.1 | UDP-galactopyranose mutase | - |
| NOV99_RS09690 (NOV99_09690) | 1972001..1973257 | + | 1257 | WP_002936184.1 | ISL3-like element ISSsu6 family transposase | - |
| NOV99_RS09695 (NOV99_09695) | 1973475..1974767 | - | 1293 | WP_161802282.1 | IS110 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|