MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85178 bp
Accession: NZ_CP101834 Location: 1..85178 Organism: Bacillus pumilus strain NDY-10 Replicon: plasmid unnamed
Accession: NZ_CP101834 Location: 1..85178 Organism: Bacillus pumilus strain NDY-10 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPA43_RS18635 (NPA43_18635) | 276..467 | + | 192 | WP_256499729.1 | hypothetical protein | - |
| NPA43_RS18640 (NPA43_18640) | 481..747 | + | 267 | WP_106031846.1 | hypothetical protein | - |
| NPA43_RS18645 (NPA43_18645) | 798..1439 | + | 642 | WP_106031798.1 | hypothetical protein | - |
| NPA43_RS18650 (NPA43_18650) | 1449..3986 | + | 2538 | WP_223256609.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NPA43_RS18655 (NPA43_18655) | 4008..6314 | + | 2307 | WP_256499730.1 | hypothetical protein | - |
| NPA43_RS18660 (NPA43_18660) | 6355..6639 | + | 285 | WP_106031796.1 | DUF5592 family protein | - |
| NPA43_RS18665 (NPA43_18665) | 6651..7331 | + | 681 | WP_256499731.1 | hypothetical protein | - |
| NPA43_RS18670 (NPA43_18670) | 7321..9252 | + | 1932 | WP_106031794.1 | type IV secretion system protein VirB4 | - |
| NPA43_RS18675 (NPA43_18675) | 9259..10296 | + | 1038 | WP_256499732.1 | hypothetical protein | VF |
| NPA43_RS18680 (NPA43_18680) | 10314..10886 | + | 573 | WP_106031792.1 | hypothetical protein | - |
| NPA43_RS18685 (NPA43_18685) | 10908..11804 | + | 897 | WP_106031791.1 | hypothetical protein | - |
| NPA43_RS18690 (NPA43_18690) | 12060..12323 | + | 264 | WP_251181625.1 | hypothetical protein | - |
| NPA43_RS18695 (NPA43_18695) | 12316..13479 | + | 1164 | WP_256499767.1 | hypothetical protein | Relaxase |
| NPA43_RS18700 (NPA43_18700) | 13485..13892 | + | 408 | WP_256499733.1 | hypothetical protein | - |
| NPA43_RS18705 (NPA43_18705) | 13912..14211 | + | 300 | WP_256499734.1 | hypothetical protein | - |
| NPA43_RS18710 (NPA43_18710) | 14222..16297 | + | 2076 | WP_256499735.1 | hypothetical protein | - |
| NPA43_RS18715 (NPA43_18715) | 16350..18506 | + | 2157 | WP_256499736.1 | type IA DNA topoisomerase | - |
| NPA43_RS18720 (NPA43_18720) | 18542..19621 | + | 1080 | WP_256499737.1 | DUF3991 domain-containing protein | - |
| NPA43_RS18725 (NPA43_18725) | 19661..20281 | + | 621 | WP_106031783.1 | WxL domain-containing protein | - |
| NPA43_RS18730 (NPA43_18730) | 20390..21409 | + | 1020 | WP_106031782.1 | DUF3324 domain-containing protein | - |
| NPA43_RS18735 (NPA43_18735) | 21422..23809 | + | 2388 | WP_256499738.1 | DUF5057 domain-containing protein | - |
| NPA43_RS18740 (NPA43_18740) | 23884..24369 | + | 486 | WP_106031780.1 | single-stranded DNA-binding protein | - |
| NPA43_RS18745 (NPA43_18745) | 24452..24769 | + | 318 | WP_106031779.1 | hypothetical protein | - |
| NPA43_RS18750 (NPA43_18750) | 25151..25768 | + | 618 | WP_251181613.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NPA43_RS18755 (NPA43_18755) | 25877..26203 | + | 327 | WP_256499739.1 | hypothetical protein | - |
| NPA43_RS18760 (NPA43_18760) | 26607..27140 | + | 534 | WP_256499740.1 | hypothetical protein | - |
| NPA43_RS18765 (NPA43_18765) | 27240..27776 | + | 537 | WP_256499741.1 | thermonuclease family protein | - |
| NPA43_RS18770 (NPA43_18770) | 27804..29192 | + | 1389 | WP_256499742.1 | DNA cytosine methyltransferase | - |
| NPA43_RS18775 (NPA43_18775) | 29206..29625 | + | 420 | WP_256499743.1 | hypothetical protein | - |
| NPA43_RS18780 (NPA43_18780) | 29622..30077 | + | 456 | WP_256499744.1 | hypothetical protein | - |
| NPA43_RS18785 (NPA43_18785) | 30136..30600 | + | 465 | WP_256499745.1 | hypothetical protein | - |
| NPA43_RS18790 (NPA43_18790) | 30620..30829 | + | 210 | WP_256499746.1 | hypothetical protein | - |
| NPA43_RS18795 (NPA43_18795) | 30816..31139 | + | 324 | WP_256499747.1 | hypothetical protein | - |
| NPA43_RS18800 (NPA43_18800) | 31188..31592 | + | 405 | WP_256499748.1 | hypothetical protein | - |
| NPA43_RS18805 (NPA43_18805) | 31634..32284 | + | 651 | WP_256499749.1 | hypothetical protein | - |
| NPA43_RS18810 (NPA43_18810) | 32271..32723 | + | 453 | WP_256499750.1 | hypothetical protein | - |
| NPA43_RS18815 (NPA43_18815) | 32738..33139 | + | 402 | WP_256499751.1 | hypothetical protein | - |
| NPA43_RS18820 (NPA43_18820) | 33194..33373 | + | 180 | WP_256499752.1 | hypothetical protein | - |
| NPA43_RS18825 (NPA43_18825) | 33498..33962 | + | 465 | WP_256499753.1 | hypothetical protein | - |
| NPA43_RS18830 (NPA43_18830) | 34020..34481 | + | 462 | WP_256499754.1 | hypothetical protein | - |
| NPA43_RS18835 (NPA43_18835) | 34766..35059 | + | 294 | WP_256499755.1 | hypothetical protein | - |
| NPA43_RS18840 (NPA43_18840) | 35421..35660 | + | 240 | WP_256499756.1 | hypothetical protein | - |
| NPA43_RS18845 (NPA43_18845) | 35644..36207 | + | 564 | WP_256499757.1 | hypothetical protein | - |
| NPA43_RS18850 (NPA43_18850) | 36277..36471 | + | 195 | WP_256499758.1 | hypothetical protein | - |
| NPA43_RS18855 (NPA43_18855) | 36494..37111 | + | 618 | WP_256499759.1 | hypothetical protein | - |
| NPA43_RS18860 (NPA43_18860) | 37150..38415 | - | 1266 | WP_256499760.1 | UV damage repair protein UvrX | - |
| NPA43_RS18865 (NPA43_18865) | 38412..38744 | - | 333 | WP_256499761.1 | YolD-like family protein | - |
| NPA43_RS18870 (NPA43_18870) | 38950..39414 | + | 465 | WP_256499762.1 | HNH endonuclease | - |
| NPA43_RS18875 (NPA43_18875) | 39407..39625 | + | 219 | WP_256499763.1 | hypothetical protein | - |
| NPA43_RS18880 (NPA43_18880) | 39776..40294 | + | 519 | WP_256499764.1 | hypothetical protein | - |
| NPA43_RS18885 (NPA43_18885) | 40333..40530 | + | 198 | WP_061410344.1 | hypothetical protein | - |
| NPA43_RS18890 (NPA43_18890) | 41088..41249 | - | 162 | WP_256499765.1 | hypothetical protein | - |
| NPA43_RS18895 (NPA43_18895) | 41264..42799 | - | 1536 | WP_256499766.1 | DNA cytosine methyltransferase | - |
| NPA43_RS18900 (NPA43_18900) | 42789..43034 | - | 246 | WP_256499699.1 | hypothetical protein | - |
| NPA43_RS18905 (NPA43_18905) | 43056..43271 | - | 216 | WP_256499700.1 | hypothetical protein | - |
| NPA43_RS18910 (NPA43_18910) | 44210..44617 | - | 408 | WP_256499701.1 | hypothetical protein | - |
| NPA43_RS18915 (NPA43_18915) | 44653..45072 | - | 420 | WP_106031842.1 | hypothetical protein | - |
| NPA43_RS18920 (NPA43_18920) | 45091..45831 | - | 741 | WP_256499702.1 | DUF2786 domain-containing protein | - |
| NPA43_RS18925 (NPA43_18925) | 45845..46636 | - | 792 | WP_142393585.1 | hypothetical protein | - |
| NPA43_RS18930 (NPA43_18930) | 47134..47331 | + | 198 | WP_106031839.1 | hypothetical protein | - |
| NPA43_RS18935 (NPA43_18935) | 47525..47914 | - | 390 | WP_256499703.1 | hypothetical protein | - |
| NPA43_RS18940 (NPA43_18940) | 47928..48431 | - | 504 | WP_256499704.1 | hypothetical protein | - |
| NPA43_RS18945 (NPA43_18945) | 48444..48830 | - | 387 | WP_256499705.1 | hypothetical protein | - |
| NPA43_RS18950 (NPA43_18950) | 48867..49457 | - | 591 | WP_256499706.1 | hypothetical protein | - |
| NPA43_RS18955 (NPA43_18955) | 50414..50572 | - | 159 | WP_256499707.1 | hypothetical protein | - |
| NPA43_RS18960 (NPA43_18960) | 50597..50845 | - | 249 | WP_256499708.1 | hypothetical protein | - |
| NPA43_RS18965 (NPA43_18965) | 50845..51375 | - | 531 | WP_256499709.1 | hypothetical protein | - |
| NPA43_RS18970 (NPA43_18970) | 52306..55323 | - | 3018 | WP_256499710.1 | SNF2-related protein | - |
| NPA43_RS18975 (NPA43_18975) | 55340..56134 | - | 795 | WP_106031832.1 | hypothetical protein | - |
| NPA43_RS18980 (NPA43_18980) | 57083..57868 | - | 786 | WP_256499711.1 | hypothetical protein | - |
| NPA43_RS18985 (NPA43_18985) | 58835..60268 | - | 1434 | WP_256499712.1 | hypothetical protein | - |
| NPA43_RS18990 (NPA43_18990) | 60336..60905 | - | 570 | WP_256499713.1 | hypothetical protein | - |
| NPA43_RS18995 (NPA43_18995) | 61565..61750 | + | 186 | WP_256499714.1 | hypothetical protein | - |
| NPA43_RS19000 (NPA43_19000) | 62041..62178 | + | 138 | WP_256499715.1 | hypothetical protein | - |
| NPA43_RS19005 (NPA43_19005) | 62235..62960 | - | 726 | WP_256499716.1 | hypothetical protein | - |
| NPA43_RS19010 (NPA43_19010) | 63138..63284 | - | 147 | WP_256499717.1 | hypothetical protein | - |
| NPA43_RS19015 (NPA43_19015) | 63274..64434 | - | 1161 | WP_256499718.1 | tetratricopeptide repeat protein | - |
| NPA43_RS19020 (NPA43_19020) | 64667..64939 | - | 273 | WP_106031826.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NPA43_RS19025 (NPA43_19025) | 65032..65361 | - | 330 | WP_256499719.1 | hypothetical protein | - |
| NPA43_RS19030 (NPA43_19030) | 65386..66453 | - | 1068 | WP_256499720.1 | hypothetical protein | - |
| NPA43_RS19035 (NPA43_19035) | 66573..67142 | - | 570 | WP_106031823.1 | hypothetical protein | - |
| NPA43_RS19040 (NPA43_19040) | 67129..67560 | - | 432 | WP_106031822.1 | hypothetical protein | - |
| NPA43_RS19045 (NPA43_19045) | 67825..68463 | - | 639 | WP_142393584.1 | hypothetical protein | - |
| NPA43_RS19050 (NPA43_19050) | 68653..68976 | - | 324 | WP_106031820.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| NPA43_RS19055 (NPA43_19055) | 68976..69245 | - | 270 | WP_106031819.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NPA43_RS19060 (NPA43_19060) | 69355..69741 | - | 387 | WP_106031818.1 | hypothetical protein | - |
| NPA43_RS19065 (NPA43_19065) | 69752..70954 | - | 1203 | WP_106031817.1 | hypothetical protein | - |
| NPA43_RS19070 (NPA43_19070) | 72195..72371 | + | 177 | WP_251181573.1 | hypothetical protein | - |
| NPA43_RS19075 (NPA43_19075) | 72478..73587 | + | 1110 | WP_106031815.1 | tetratricopeptide repeat protein | - |
| NPA43_RS19080 (NPA43_19080) | 73805..74191 | - | 387 | WP_106031814.1 | helix-turn-helix transcriptional regulator | - |
| NPA43_RS19085 (NPA43_19085) | 74699..75232 | + | 534 | WP_106031813.1 | hypothetical protein | - |
| NPA43_RS19090 (NPA43_19090) | 75567..76619 | + | 1053 | WP_256499721.1 | hypothetical protein | - |
| NPA43_RS19095 (NPA43_19095) | 77185..77379 | + | 195 | WP_256499722.1 | hypothetical protein | - |
| NPA43_RS19100 (NPA43_19100) | 77385..79685 | + | 2301 | WP_256499723.1 | hypothetical protein | - |
| NPA43_RS19105 (NPA43_19105) | 79745..79954 | + | 210 | WP_256499724.1 | hypothetical protein | - |
| NPA43_RS19110 (NPA43_19110) | 79951..80334 | + | 384 | WP_256499725.1 | hypothetical protein | - |
| NPA43_RS19115 (NPA43_19115) | 80345..81574 | + | 1230 | WP_256499726.1 | ATPase, T2SS/T4P/T4SS family | - |
| NPA43_RS19120 (NPA43_19120) | 81571..82380 | + | 810 | WP_256499727.1 | hypothetical protein | - |
| NPA43_RS19125 (NPA43_19125) | 82377..83120 | + | 744 | WP_106031804.1 | hypothetical protein | - |
| NPA43_RS19130 (NPA43_19130) | 83132..83464 | + | 333 | WP_256499728.1 | hypothetical protein | - |
| NPA43_RS19135 (NPA43_19135) | 83720..83872 | + | 153 | WP_189318277.1 | hypothetical protein | - |
| NPA43_RS19140 (NPA43_19140) | 83918..84070 | + | 153 | WP_189318277.1 | hypothetical protein | - |
| NPA43_RS19145 (NPA43_19145) | 84117..84269 | + | 153 | WP_189318277.1 | hypothetical protein | - |
| NPA43_RS19150 (NPA43_19150) | 84602..84979 | + | 378 | WP_106031801.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|