MGE detailed information
MGE type: Prophage MGE length: 61361 bp
Accession: NZ_CP101365 Location: 2043040..2104400 Organism: Salmonella enterica strain SC2014107 Replicon: chromosome
Accession: NZ_CP101365 Location: 2043040..2104400 Organism: Salmonella enterica strain SC2014107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NM059_RS09940 () | 2038777..2039229 | + | 453 | WP_000653694.1 | dihydroneopterin triphosphate diphosphatase | - |
| NM059_RS09945 () | 2039259..2039999 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NM059_RS09950 () | 2040036..2040557 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NM059_RS09955 () | 2040559..2041158 | - | 600 | WP_000716742.1 | YebB family permuted papain-like enzyme | - |
| NM059_RS09960 () | 2041401..2042059 | + | 659 | Protein_1945 | hypothetical protein | - |
| NM059_RS09965 () | 2042420..2043031 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NM059_RS09970 () | 2043040..2044050 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NM059_RS09975 () | 2044129..2044914 | - | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NM059_RS09980 () | 2044911..2045666 | - | 756 | WP_000203013.1 | Zinc import ATP-binding protein ZnuC | VF |
| NM059_RS09985 () | 2045745..2046689 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NM059_RS09990 () | 2046705..2048024 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NM059_RS09995 () | 2048141..2049112 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NM059_RS10000 () | 2049185..2050627 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NM059_RS10005 () | 2050751..2051620 | - | 870 | WP_023194353.1 | MurR/RpiR family transcriptional regulator | - |
| NM059_RS10010 () | 2051962..2053437 | + | 1476 | WP_000301704.1 | glucose-6-phosphate dehydrogenase | - |
| NM059_RS10015 () | 2053672..2055483 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NM059_RS10020 () | 2055521..2056162 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NM059_RS10025 () | 2056262..2057440 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NM059_RS10030 () | 2057571..2057861 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NM059_RS10035 () | 2057929..2058282 | + | 354 | WP_001042123.1 | protein YebF | - |
| NM059_RS10040 () | 2058376..2059035 | + | 660 | WP_023243913.1 | tellurite resistance TerB family protein | - |
| NM059_RS10045 () | 2059248..2061299 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| NM059_RS10050 () | 2061334..2062032 | - | 699 | WP_000944279.1 | exodeoxyribonuclease X | - |
| NM059_RS10055 () | 2062056..2062712 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| NM059_RS10060 () | 2062820..2063050 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NM059_RS10065 () | 2063188..2063562 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NM059_RS10070 () | 2063563..2064438 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| NM059_RS10075 () | 2064455..2064808 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2064910..2065053 | - | 144 | - | - | Antitoxin Detail |
| - | 2064948..2065051 | + | 104 | - | - | Toxin Detail |
| NM059_RS10080 () | 2065181..2066022 | - | 842 | Protein_1969 | tyrosine-type recombinase/integrase | - |
| NM059_RS10085 () | 2066113..2066469 | + | 357 | WP_000003145.1 | hypothetical protein | - |
| NM059_RS10090 () | 2066423..2066629 | + | 207 | Protein_1971 | phage tail protein | - |
| NM059_RS10095 () | 2066801..2066956 | + | 156 | Protein_1972 | DUF4376 domain-containing protein | - |
| NM059_RS10100 () | 2067062..2067394 | + | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| NM059_RS10105 () | 2067443..2067552 | + | 110 | Protein_1974 | tail fiber assembly protein | - |
| NM059_RS10110 () | 2067643..2067828 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| NM059_RS10115 () | 2068071..2068268 | - | 198 | Protein_1976 | tail fiber assembly protein | - |
| NM059_RS10120 () | 2068264..2069034 | - | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| NM059_RS10125 () | 2069110..2069202 | + | 93 | Protein_1978 | DUF4113 domain-containing protein | - |
| NM059_RS10130 () | 2069525..2069653 | + | 129 | Protein_1979 | helix-turn-helix domain-containing protein | - |
| NM059_RS10135 () | 2069682..2070482 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| NM059_RS10140 () | 2071436..2072515 | - | 1080 | WP_076741596.1 | hypothetical protein ; Integrase | Integrase |
| NM059_RS10145 () | 2072548..2073699 | - | 1152 | Protein_1982 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| NM059_RS10150 () | 2073688..2073879 | + | 192 | Protein_1983 | glycoside hydrolase family 19 protein | - |
| NM059_RS10155 () | 2073933..2074466 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| NM059_RS10160 () | 2074723..2074890 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NM059_RS10165 () | 2075198..2075458 | + | 261 | Protein_1986 | DUF1441 family protein | - |
| NM059_RS10170 () | 2075673..2076017 | + | 345 | Protein_1987 | macro domain-containing protein | - |
| NM059_RS10175 () | 2076027..2076497 | + | 471 | Protein_1988 | tail fiber assembly protein | - |
| NM059_RS10180 () | 2076594..2076794 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NM059_RS10185 () | 2077184..2077364 | - | 181 | Protein_1990 | IS3 family transposase | - |
| NM059_RS10190 () | 2077355..2077456 | + | 102 | Protein_1991 | arsenic transporter | - |
| NM059_RS10195 () | 2078078..2078310 | + | 233 | Protein_1992 | helix-turn-helix domain-containing protein | - |
| NM059_RS10200 () | 2078637..2079251 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NM059_RS10205 () | 2079261..2079419 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NM059_RS10210 () | 2079552..2080466 | - | 915 | WP_001233454.1 | DMT family transporter | - |
| NM059_RS10215 () | 2081761..2082182 | - | 422 | Protein_1996 | tyrosine-type recombinase/integrase | - |
| NM059_RS10220 () | 2082253..2083447 | + | 1195 | Protein_1997 | IS256 family transposase IS285 | Transposase |
| NM059_RS10225 () | 2083593..2083733 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NM059_RS10230 () | 2083899..2084168 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NM059_RS10235 () | 2084538..2084957 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| NM059_RS10240 () | 2085330..2085806 | - | 477 | WP_079798327.1 | hypothetical protein | - |
| NM059_RS10245 () | 2086135..2086530 | - | 396 | WP_000422889.1 | DUF1398 domain-containing protein | - |
| NM059_RS10250 () | 2087214..2087936 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NM059_RS10255 () | 2088221..2088385 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| NM059_RS10260 () | 2088609..2089259 | + | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| NM059_RS10265 () | 2089278..2089469 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| NM059_RS10270 () | 2089580..2089816 | - | 237 | WP_024131167.1 | YebV family protein | - |
| NM059_RS10275 () | 2089934..2091373 | - | 1440 | WP_024152359.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NM059_RS10280 () | 2091451..2094084 | - | 2634 | WP_001529852.1 | Intermembrane transport protein YebT | VF |
| NM059_RS10285 () | 2094053..2095336 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NM059_RS10290 () | 2095465..2095962 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NM059_RS10295 () | 2096060..2096746 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NM059_RS10300 () | 2096766..2098814 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NM059_RS10305 () | 2099007..2099888 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NM059_RS10310 () | 2099936..2101309 | - | 1374 | WP_079798328.1 | MFS transporter | - |
| NM059_RS10315 () | 2101485..2102276 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NM059_RS10320 () | 2102488..2102727 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NM059_RS10325 () | 2102885..2103028 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NM059_RS10330 () | 2103099..2103386 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NM059_RS10335 () | 2104035..2104178 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NM059_RS10340 () | 2104191..2104400 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NM059_RS10345 () | 2104620..2106365 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NM059_RS10350 () | 2106431..2107240 | + | 810 | WP_023193489.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NM059_RS10355 () | 2107237..2107803 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NM059_RS10360 () | 2108213..2108671 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|