MGE detailed information
MGE type: Prophage MGE length: 67364 bp
Accession: NZ_CP101310 Location: 2998487..3065850 Organism: Escherichia coli strain 99-3311 Replicon: chromosome
Accession: NZ_CP101310 Location: 2998487..3065850 Organism: Escherichia coli strain 99-3311 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK62_RS14985 (2993570) | 2993570..2994211 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| NMK62_RS14990 (2994215) | 2994215..2995585 | + | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| NMK62_RS14995 (2995754) | 2995754..2996425 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| NMK62_RS15000 (2996425) | 2996425..2997885 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| NMK62_RS15005 (2998487) | 2998487..2998768 | - | 282 | WP_000133424.1 | hypothetical protein | - |
| NMK62_RS15010 (2999025) | 2999025..2999567 | - | 543 | WP_000835281.1 | terminase small subunit | - |
| NMK62_RS15015 (2999773) | 2999773..3000186 | - | 414 | WP_000224599.1 | hypothetical protein | - |
| NMK62_RS15020 (3000199) | 3000199..3000534 | - | 336 | WP_000380886.1 | head decoration protein | - |
| NMK62_RS15025 (3000547) | 3000547..3001602 | - | 1056 | WP_000907455.1 | major capsid protein | - |
| NMK62_RS15030 (3001602) | 3001602..3001808 | - | 207 | WP_000796958.1 | hypothetical protein | - |
| NMK62_RS15035 (3002060) | 3002060..3002284 | - | 225 | WP_001132079.1 | hypothetical protein | - |
| NMK62_RS15040 (3002411) | 3002411..3002683 | - | 273 | WP_000233304.1 | PerC family transcriptional regulator | - |
| NMK62_RS15045 (3002694) | 3002694..3003104 | - | 411 | WP_000126687.1 | single-stranded DNA-binding protein | - |
| NMK62_RS15050 (3003101) | 3003101..3003352 | - | 252 | WP_000192401.1 | hypothetical protein | - |
| NMK62_RS15055 (3003553) | 3003553..3004953 | - | 1401 | WP_000833618.1 | helicase RepA family protein | - |
| NMK62_RS15060 (3004950) | 3004950..3005249 | - | 300 | WP_000770178.1 | DUF4222 domain-containing protein | - |
| NMK62_RS15065 (3005255) | 3005255..3005488 | - | 234 | WP_001204985.1 | hypothetical protein | - |
| NMK62_RS15070 (3005481) | 3005481..3005945 | - | 465 | WP_000551675.1 | hypothetical protein | - |
| NMK62_RS15075 (3005935) | 3005935..3006147 | - | 213 | WP_000609225.1 | hypothetical protein | - |
| NMK62_RS15080 (3006140) | 3006140..3006337 | - | 198 | WP_000226782.1 | host cell division inhibitor Icd-like protein | - |
| NMK62_RS15085 (3006530) | 3006530..3007084 | - | 555 | Protein_2956 | host cell division inhibitor Icd-like protein | - |
| NMK62_RS15090 (3007142) | 3007142..3007330 | - | 189 | WP_000953272.1 | AlpA family transcriptional regulator | - |
| NMK62_RS15095 (3007695) | 3007695..3008924 | - | 1230 | WP_000085256.1 | hypothetical protein ; Integrase | Integrase |
| NMK62_RS15100 (3009173) | 3009173..3010294 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| NMK62_RS15105 (3010343) | 3010343..3011569 | - | 1227 | WP_000359446.1 | peptidase T | - |
| NMK62_RS15110 (3011819) | 3011819..3012955 | + | 1137 | WP_000531594.1 | hypothetical protein | VF |
| NMK62_RS15115 (3012939) | 3012939..3013802 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| NMK62_RS15120 (3013968) | 3013968..3014297 | + | 330 | WP_022581964.1 | YkgJ family cysteine cluster protein | - |
| NMK62_RS15125 (3014565) | 3014565..3016523 | - | 1959 | WP_032245585.1 | ISNCY family transposase KIS | Transposase |
| NMK62_RS15130 (3016675) | 3016675..3017298 | - | 624 | WP_001270059.1 | hypothetical protein | VF |
| NMK62_RS15135 (3017367) | 3017367..3021062 | - | 3696 | WP_254854417.1 | phage tail protein | - |
| NMK62_RS15140 (3021486) | 3021486..3022067 | - | 582 | WP_022581700.1 | tail assembly protein | - |
| NMK62_RS15145 (3022064) | 3022064..3022807 | - | 744 | WP_254854418.1 | C40 family peptidase | - |
| NMK62_RS15150 (3022818) | 3022818..3023516 | - | 699 | WP_001499019.1 | phage minor tail protein L | - |
| NMK62_RS15155 (3023516) | 3023516..3023845 | - | 330 | WP_000847279.1 | phage tail protein | - |
| NMK62_RS15160 (3023842) | 3023842..3026487 | - | 2646 | WP_254854420.1 | phage tail tape measure protein | - |
| NMK62_RS15165 (3026537) | 3026537..3026839 | - | 303 | Protein_2972 | phage tail assembly protein T | - |
| NMK62_RS15170 (3026866) | 3026866..3027288 | - | 423 | WP_000479054.1 | phage minor tail protein G | - |
| NMK62_RS15175 (3027304) | 3027304..3028053 | - | 750 | WP_022581880.1 | phage tail protein | - |
| NMK62_RS15180 (3028061) | 3028061..3028459 | - | 399 | WP_001561860.1 | phage tail terminator protein | - |
| NMK62_RS15185 (3028472) | 3028472..3029095 | - | 624 | WP_022581879.1 | phage tail protein | - |
| NMK62_RS15190 (3029098) | 3029098..3029379 | - | 282 | WP_022581878.1 | DNA breaking-rejoining protein | - |
| NMK62_RS15195 (3029372) | 3029372..3029698 | - | 327 | WP_001097058.1 | DUF2190 family protein | - |
| NMK62_RS15200 (3029786) | 3029786..3031810 | - | 2025 | WP_022581877.1 | hypothetical protein | VF |
| NMK62_RS15205 (3031755) | 3031755..3033257 | - | 1503 | WP_000974568.1 | phage portal protein | - |
| NMK62_RS15210 (3033257) | 3033257..3033469 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| NMK62_RS15215 (3033466) | 3033466..3035589 | - | 2124 | WP_022581876.1 | phage terminase large subunit family protein | - |
| NMK62_RS15220 (3035586) | 3035586..3036062 | - | 477 | WP_000348556.1 | DUF1441 family protein | - |
| NMK62_RS15225 (3036577) | 3036577..3036762 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| NMK62_RS15230 (3036984) | 3036984..3037097 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| NMK62_RS15235 (3037319) | 3037319..3037852 | - | 534 | WP_001092875.1 | lysozyme | - |
| NMK62_RS15240 (3038364) | 3038364..3038849 | - | 486 | WP_001457151.1 | hypothetical protein | - |
| NMK62_RS15245 (3038853) | 3038853..3039068 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| NMK62_RS15250 (3039565) | 3039565..3041538 | - | 1974 | WP_137568588.1 | DUF1737 domain-containing protein | - |
| NMK62_RS15255 (3042050) | 3042050..3042319 | - | 270 | WP_000738080.1 | hypothetical protein | VF |
| NMK62_RS15260 (3042331) | 3042331..3043290 | - | 960 | WP_001365055.1 | hypothetical protein | VF |
| NMK62_RS15280 (3043674) | 3043674..3044732 | - | 1059 | WP_040077791.1 | site-specific DNA-methyltransferase | - |
| NMK62_RS15285 (3044883) | 3044883..3045080 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| NMK62_RS15290 (3045298) | 3045298..3045858 | - | 561 | WP_000640044.1 | DUF1133 family protein | - |
| NMK62_RS15295 (3045867) | 3045867..3046226 | - | 360 | WP_000904153.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NMK62_RS15300 (3046239) | 3046239..3047288 | - | 1050 | WP_032245807.1 | DUF968 domain-containing protein | - |
| NMK62_RS15305 (3047290) | 3047290..3047562 | - | 273 | WP_032212035.1 | hypothetical protein | - |
| NMK62_RS15310 (3047729) | 3047729..3047884 | - | 156 | WP_000813246.1 | Hok/Gef family protein | - |
| NMK62_RS15315 (3048175) | 3048175..3048690 | - | 516 | WP_001289995.1 | hypothetical protein | - |
| NMK62_RS15320 (3048687) | 3048687..3048863 | - | 177 | WP_000753060.1 | hypothetical protein | - |
| NMK62_RS15325 (3048856) | 3048856..3049038 | - | 183 | WP_022581296.1 | hypothetical protein | - |
| NMK62_RS15330 (3049186) | 3049186..3049491 | - | 306 | WP_053294093.1 | DUF4406 domain-containing protein | - |
| NMK62_RS15335 (3049488) | 3049488..3049769 | - | 282 | WP_072094476.1 | DNA-binding protein | - |
| NMK62_RS15340 (3049802) | 3049802..3050563 | - | 762 | WP_254854422.1 | DUF1627 domain-containing protein | - |
| NMK62_RS15345 (3050593) | 3050593..3051333 | - | 741 | WP_000790460.1 | ATP-binding protein | - |
| NMK62_RS15350 (3051340) | 3051340..3052305 | - | 966 | WP_000054520.1 | hypothetical protein | - |
| NMK62_RS15355 (3052286) | 3052286..3052807 | - | 522 | WP_000705386.1 | toxin YdaT family protein | - |
| NMK62_RS15360 (3052791) | 3052791..3053069 | - | 279 | WP_000548554.1 | YdaS family helix-turn-helix protein | - |
| NMK62_RS15365 (3053186) | 3053186..3053584 | + | 399 | WP_000209117.1 | helix-turn-helix domain-containing protein | - |
| NMK62_RS15370 (3053614) | 3053614..3053802 | + | 189 | WP_001090455.1 | hypothetical protein | Antitoxin Detail |
| NMK62_RS15375 (3053806) | 3053806..3054093 | + | 288 | WP_001444087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMK62_RS15380 (3054365) | 3054365..3054517 | + | 153 | WP_000380321.1 | DUF1391 family protein | - |
| NMK62_RS15385 (3054529) | 3054529..3054897 | + | 369 | WP_028985920.1 | hypothetical protein | - |
| NMK62_RS15390 (3055682) | 3055682..3055870 | + | 189 | WP_000450222.1 | cell division inhibition protein DicB | - |
| NMK62_RS15395 (3055867) | 3055867..3056055 | + | 189 | WP_022581374.1 | DUF1482 family protein | - |
| NMK62_RS15400 (3056148) | 3056148..3058550 | + | 2403 | WP_022581375.1 | exonuclease | - |
| NMK62_RS15405 (3058612) | 3058612..3058881 | + | 270 | WP_000003742.1 | excisionase | - |
| NMK62_RS15410 (3058850) | 3058850..3059968 | + | 1119 | WP_022581818.1 | hypothetical protein ; Integrase | Integrase |
| NMK62_RS15415 (3060135) | 3060135..3060929 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| NMK62_RS15420 (3060926) | 3060926..3061972 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| NMK62_RS15425 (3062128) | 3062128..3062949 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| NMK62_RS15430 (3062965) | 3062965..3063876 | - | 912 | WP_000291292.1 | N-acetylglucosamine kinase | - |
| NMK62_RS15435 (3063905) | 3063905..3065149 | - | 1245 | WP_001251367.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| NMK62_RS15440 (3065149) | 3065149..3065850 | - | 702 | WP_001033690.1 | hypothetical protein | VF |
| NMK62_RS15445 (3065843) | 3065843..3067042 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| NMK62_RS15450 (3067304) | 3067304..3068377 | + | 1074 | WP_000810277.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|