MGE detailed information
MGE type: Prophage MGE length: 61951 bp
Accession: NZ_CP101305 Location: 4943993..5005943 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Accession: NZ_CP101305 Location: 4943993..5005943 Organism: Escherichia coli strain 2002-3211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK57_RS24760 (4939048) | 4939048..4939464 | - | 417 | WP_000270372.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| NMK57_RS24765 (4939575) | 4939575..4940288 | - | 714 | WP_001307512.1 | acid phosphatase AphA | - |
| NMK57_RS24770 (4940690) | 4940690..4940912 | + | 223 | Protein_4852 | hypothetical protein | - |
| NMK57_RS24775 (4941415) | 4941415..4942608 | - | 1194 | WP_000486966.1 | aromatic amino acid transaminase | - |
| NMK57_RS24780 (4942861) | 4942861..4943940 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| NMK57_RS24785 (4943993) | 4943993..4945408 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| NMK57_RS24790 (4945491) | 4945491..4946474 | + | 984 | Protein_4856 | quinone oxidoreductase | - |
| NMK57_RS24795 (4946640) | 4946640..4946882 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| NMK57_RS24800 (4947016) | 4947016..4948053 | - | 1038 | WP_024025750.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| NMK57_RS24805 (4948142) | 4948142..4949239 | + | 1098 | WP_000332271.1 | hypothetical protein ; Integrase | Integrase |
| NMK57_RS24810 (4949301) | 4949301..4949549 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| NMK57_RS24815 (4949657) | 4949657..4949814 | - | 158 | Protein_4861 | DUF4376 domain-containing protein | - |
| NMK57_RS24820 (4949997) | 4949997..4951153 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| NMK57_RS24825 (4951410) | 4951410..4952060 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| NMK57_RS24830 (4952285) | 4952285..4953161 | - | 877 | Protein_4864 | hypothetical protein | VF |
| NMK57_RS24840 (4954621) | 4954621..4954884 | - | 264 | WP_024174195.1 | phage tail fiber C-terminal domain-containing protein | - |
| NMK57_RS24845 (4954886) | 4954886..4956199 | - | 1314 | WP_032212803.1 | ISNCY family transposase KIS | Transposase |
| NMK57_RS24850 (4956264) | 4956264..4956863 | - | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| NMK57_RS24855 (4956930) | 4956930..4960322 | - | 3393 | WP_032212804.1 | host specificity protein J | - |
| NMK57_RS24860 (4960558) | 4960558..4961142 | - | 585 | WP_001370114.1 | tail assembly protein | - |
| NMK57_RS24865 (4961139) | 4961139..4961882 | - | 744 | WP_001370115.1 | C40 family peptidase | - |
| NMK57_RS24870 (4961888) | 4961888..4962586 | - | 699 | WP_001299882.1 | phage minor tail protein L | - |
| NMK57_RS24875 (4962586) | 4962586..4962915 | - | 330 | WP_000847401.1 | phage tail protein | - |
| NMK57_RS24880 (4962912) | 4962912..4965524 | - | 2613 | WP_032212771.1 | phage tail tape measure protein | - |
| NMK57_RS24885 (4965505) | 4965505..4965918 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| NMK57_RS24890 (4965945) | 4965945..4966367 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| NMK57_RS24895 (4966381) | 4966381..4967133 | - | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| NMK57_RS24900 (4967141) | 4967141..4967536 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| NMK57_RS24905 (4967533) | 4967533..4968111 | - | 579 | WP_024025847.1 | phage tail protein | - |
| NMK57_RS24910 (4968123) | 4968123..4968476 | - | 354 | WP_000753019.1 | head-tail joining protein | - |
| NMK57_RS24915 (4968488) | 4968488..4968883 | - | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| NMK57_RS24920 (4968925) | 4968925..4969950 | - | 1026 | WP_024025845.1 | major capsid protein | - |
| NMK57_RS24925 (4970006) | 4970006..4970338 | - | 333 | WP_001299443.1 | head decoration protein | - |
| NMK57_RS24930 (4970348) | 4970348..4971667 | - | 1320 | WP_032212710.1 | S49 family peptidase | - |
| NMK57_RS24935 (4971648) | 4971648..4973249 | - | 1602 | WP_024026143.1 | phage portal protein | - |
| NMK57_RS24940 (4973246) | 4973246..4973452 | - | 207 | WP_000198153.1 | gpW family protein | - |
| NMK57_RS24945 (4973449) | 4973449..4975374 | - | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| NMK57_RS24950 (4975349) | 4975349..4975894 | - | 546 | WP_000867498.1 | terminase small subunit | - |
| NMK57_RS24955 (4976281) | 4976281..4976505 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| NMK57_RS24960 (4976587) | 4976587..4976901 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| NMK57_RS24965 (4977427) | 4977427..4977612 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| NMK57_RS24970 (4977835) | 4977835..4977981 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| NMK57_RS24975 (4977981) | 4977981..4978550 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| NMK57_RS24980 (4978821) | 4978821..4979354 | - | 534 | WP_052933063.1 | lysozyme | - |
| NMK57_RS24985 (4979405) | 4979405..4979749 | - | 345 | WP_000731219.1 | YdfR family protein | - |
| NMK57_RS24990 (4979754) | 4979754..4979969 | - | 216 | WP_000284522.1 | class II holin family protein | - |
| NMK57_RS24995 (4980119) | 4980119..4981981 | - | 1863 | WP_000143128.1 | sialate O-acetylesterase | - |
| NMK57_RS25015 (4982804) | 4982804..4982917 | - | 114 | Protein_4898 | site-specific DNA-methyltransferase | - |
| NMK57_RS25020 (4983266) | 4983266..4983631 | - | 366 | Protein_4899 | antitermination protein | - |
| NMK57_RS25030 (4984893) | 4984893..4985279 | - | 387 | Protein_4901 | antitermination protein | - |
| NMK57_RS25035 (4985293) | 4985293..4986282 | - | 990 | WP_001370152.1 | DUF968 domain-containing protein | - |
| NMK57_RS25040 (4986334) | 4986334..4986591 | - | 258 | WP_001370224.1 | hypothetical protein | - |
| NMK57_RS25045 (4986588) | 4986588..4987988 | - | 1401 | WP_000203855.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| NMK57_RS25050 (4987985) | 4987985..4988884 | - | 900 | WP_000988265.1 | ATP-binding protein | - |
| NMK57_RS25055 (4988895) | 4988895..4989719 | - | 825 | WP_000061545.1 | helix-turn-helix domain-containing protein | - |
| NMK57_RS25060 (4989716) | 4989716..4989940 | - | 225 | WP_000618008.1 | hypothetical protein | - |
| NMK57_RS25065 (4989937) | 4989937..4990131 | - | 195 | WP_000626861.1 | hypothetical protein | - |
| NMK57_RS25070 (4990128) | 4990128..4991048 | - | 921 | WP_231437393.1 | Rha family phage regulatory protein | - |
| NMK57_RS25075 (4990966) | 4990966..4991145 | - | 180 | WP_032208999.1 | DUF4222 domain-containing protein | - |
| NMK57_RS25080 (4991291) | 4991291..4991875 | - | 585 | WP_000514175.1 | YmfL family putative regulatory protein | - |
| NMK57_RS25085 (4991903) | 4991903..4992100 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| NMK57_RS25090 (4992196) | 4992196..4992849 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| NMK57_RS25095 (4993307) | 4993307..4993669 | + | 363 | WP_000135680.1 | protein YfdP | - |
| NMK57_RS25100 (4993735) | 4993735..4994559 | + | 825 | WP_000081294.1 | YfdQ family protein | - |
| NMK57_RS25105 (4994687) | 4994687..4994845 | + | 159 | Protein_4916 | 5'-deoxynucleotidase | - |
| NMK57_RS25110 (4994898) | 4994898..4996111 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| NMK57_RS25115 (4996151) | 4996151..4996537 | + | 387 | Protein_4918 | 5'-deoxynucleotidase | - |
| NMK57_RS25120 (4996528) | 4996528..4996878 | + | 351 | WP_001242740.1 | hypothetical protein | - |
| NMK57_RS25125 (4996875) | 4996875..4997348 | + | 474 | WP_000145671.1 | class I SAM-dependent methyltransferase | - |
| NMK57_RS25130 (4997495) | 4997495..4997962 | + | 468 | WP_000829413.1 | hypothetical protein | - |
| NMK57_RS25135 (4997964) | 4997964..4998155 | + | 192 | WP_001014294.1 | hypothetical protein | - |
| NMK57_RS25140 (4998158) | 4998158..4998454 | + | 297 | Protein_4923 | DUF551 domain-containing protein | - |
| NMK57_RS25145 (4998701) | 4998701..4998892 | + | 192 | WP_001690200.1 | DUF551 domain-containing protein | - |
| NMK57_RS25150 (4998892) | 4998892..4999464 | + | 573 | WP_001061339.1 | 3'-5' exonuclease | - |
| NMK57_RS25155 (4999501) | 4999501..4999782 | + | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| NMK57_RS25160 (4999830) | 4999830..5000003 | - | 174 | WP_000390069.1 | hypothetical protein | - |
| NMK57_RS25165 (5000043) | 5000043..5000429 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| NMK57_RS25170 (5000459) | 5000459..5000968 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| NMK57_RS25175 (5001284) | 5001284..5001388 | - | 105 | Protein_4930 | tRNA-dihydrouridine synthase | - |
| NMK57_RS25180 (5001751) | 5001751..5002737 | - | 987 | WP_000912572.1 | DUF2713 domain-containing protein | - |
| NMK57_RS25185 (5003055) | 5003055..5003570 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| NMK57_RS25190 (5003612) | 5003612..5003821 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| NMK57_RS25195 (5003937) | 5003937..5005262 | - | 1326 | WP_001370252.1 | MATE family efflux transporter DinF | - |
| NMK57_RS25200 (5005335) | 5005335..5005943 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| NMK57_RS25205 (5006053) | 5006053..5006421 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| NMK57_RS25210 (5006592) | 5006592..5009015 | + | 2424 | WP_000017353.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| NMK57_RS25215 (5009170) | 5009170..5010042 | - | 873 | WP_000455240.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| NMK57_RS25220 (5010055) | 5010055..5010552 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|