MGE detailed information
MGE type: Prophage MGE length: 62047 bp
Accession: NZ_CP101292 Location: 3380114..3442160 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Accession: NZ_CP101292 Location: 3380114..3442160 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK58_RS17550 () | 3375554..3376927 | + | 1374 | WP_001127210.1 | MFS transporter | - |
| NMK58_RS17555 () | 3376973..3377854 | - | 882 | WP_000984517.1 | protease HtpX | - |
| NMK58_RS17560 () | 3378046..3380094 | - | 2049 | WP_001427396.1 | carboxy terminal-processing peptidase | - |
| NMK58_RS17565 () | 3380114..3380812 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| NMK58_RS17570 () | 3380909..3381406 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| NMK58_RS17575 () | 3381536..3382819 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| NMK58_RS17580 () | 3382788..3385421 | + | 2634 | WP_001299674.1 | Intermembrane transport protein YebT | VF |
| NMK58_RS17585 () | 3385501..3386940 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NMK58_RS17590 () | 3387058..3387294 | + | 237 | WP_001295499.1 | YebV family protein | - |
| NMK58_RS17595 () | 3387399..3387590 | + | 192 | WP_001296140.1 | YebW family protein | - |
| NMK58_RS17600 () | 3387722..3388878 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| NMK58_RS17605 () | 3388919..3389515 | - | 597 | WP_024017729.1 | protein-serine/threonine phosphatase | - |
| NMK58_RS17610 () | 3389984..3390141 | - | 158 | Protein_3445 | DUF4376 domain-containing protein | - |
| NMK58_RS17615 () | 3390470..3391120 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| NMK58_RS17620 () | 3391345..3392220 | - | 876 | WP_000491545.1 | hypothetical protein | VF |
| NMK58_RS17625 () | 3392361..3392630 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| NMK58_RS17630 () | 3392632..3393945 | - | 1314 | WP_115447904.1 | ISNCY family transposase KIS | Transposase |
| NMK58_RS17635 () | 3394010..3394609 | - | 600 | WP_001230428.1 | Outer membrane protein X | VF |
| NMK58_RS17640 () | 3394677..3398069 | - | 3393 | WP_205702204.1 | host specificity protein J | - |
| NMK58_RS17645 () | 3398315..3398896 | - | 582 | WP_032325226.1 | tail assembly protein | - |
| NMK58_RS17650 () | 3398893..3399635 | - | 743 | Protein_3453 | C40 family peptidase | - |
| NMK58_RS17655 () | 3399641..3400339 | - | 699 | WP_001299882.1 | phage minor tail protein L | - |
| NMK58_RS17660 () | 3400339..3400668 | - | 330 | WP_000847304.1 | phage tail protein | - |
| NMK58_RS17665 () | 3400665..3403244 | - | 2580 | WP_000082320.1 | phage tail tape measure protein | - |
| NMK58_RS17670 () | 3403225..3403638 | - | 414 | WP_000533431.1 | phage tail assembly protein T | - |
| NMK58_RS17675 () | 3403665..3404096 | - | 432 | WP_000479086.1 | phage minor tail protein G | - |
| NMK58_RS17680 () | 3404110..3404862 | - | 753 | WP_032325228.1 | phage tail protein | - |
| NMK58_RS17685 () | 3404870..3405265 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| NMK58_RS17690 () | 3405262..3405840 | - | 579 | WP_000975098.1 | phage tail protein | - |
| NMK58_RS17695 () | 3405852..3406205 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| NMK58_RS17700 () | 3406217..3406612 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| NMK58_RS17705 () | 3406654..3407679 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| NMK58_RS17710 () | 3407735..3408067 | - | 333 | WP_001365129.1 | head decoration protein | - |
| NMK58_RS17715 () | 3408077..3409396 | - | 1320 | WP_254854520.1 | S49 family peptidase | - |
| NMK58_RS17720 () | 3409377..3410978 | - | 1602 | WP_001443752.1 | phage portal protein | - |
| NMK58_RS17725 () | 3410975..3411181 | - | 207 | WP_000198153.1 | gpW family protein | - |
| NMK58_RS17730 () | 3411178..3413103 | - | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| NMK58_RS17735 () | 3413078..3413623 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| NMK58_RS17740 () | 3414012..3414206 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| NMK58_RS17745 () | 3414394..3415011 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| NMK58_RS17750 () | 3415161..3415598 | - | 438 | WP_000092325.1 | lysis protein | - |
| NMK58_RS17755 () | 3415595..3416092 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| NMK58_RS17760 () | 3416092..3416307 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| NMK58_RS17765 () | 3416746..3418596 | - | 1851 | WP_024247920.1 | SASA family carbohydrate esterase | - |
| NMK58_RS17770 () | 3419003..3419170 | - | 168 | WP_000216636.1 | DUF3927 family protein | - |
| NMK58_RS17775 () | 3419167..3419529 | - | 363 | Protein_3478 | tellurite resistance TerB family protein | - |
| NMK58_RS17780 () | 3419767..3420588 | - | 822 | WP_000762928.1 | antitermination protein | - |
| NMK58_RS17785 () | 3420585..3420959 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NMK58_RS17790 () | 3420972..3422021 | - | 1050 | WP_096900548.1 | DUF968 domain-containing protein | - |
| NMK58_RS17795 () | 3422023..3422295 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| NMK58_RS17800 () | 3422417..3422761 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| NMK58_RS17805 () | 3422881..3423036 | - | 156 | WP_000813258.1 | Hok/Gef family protein | - |
| NMK58_RS17810 () | 3423327..3423884 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| NMK58_RS17815 () | 3423886..3424104 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| NMK58_RS17820 () | 3424232..3424543 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| NMK58_RS17825 () | 3424536..3424763 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| NMK58_RS17830 () | 3424760..3425041 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| NMK58_RS17835 () | 3425074..3425835 | - | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| NMK58_RS17840 () | 3425861..3426602 | - | 742 | Protein_3491 | ATP-binding protein | - |
| NMK58_RS17845 () | 3426609..3427571 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| NMK58_RS17850 () | 3427594..3428019 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| NMK58_RS17855 () | 3428016..3428318 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| NMK58_RS17860 () | 3428416..3428787 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| NMK58_RS17865 () | 3428808..3428999 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| NMK58_RS17870 () | 3429001..3429279 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NMK58_RS17875 () | 3429566..3429718 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| NMK58_RS17880 () | 3430139..3430360 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| NMK58_RS17885 () | 3430360..3430530 | + | 171 | WP_001427414.1 | YdaE family protein | - |
| NMK58_RS17890 () | 3430604..3430879 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| NMK58_RS17895 () | 3430978..3433629 | + | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| NMK58_RS17900 () | 3433622..3434431 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| NMK58_RS17905 () | 3434488..3434682 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| NMK58_RS17910 () | 3434675..3434863 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 3434681..3434859 | - | 179 | NuclAT_1 | - | - |
| - () | 3434681..3434859 | - | 179 | NuclAT_1 | - | - |
| - () | 3434681..3434859 | - | 179 | NuclAT_1 | - | - |
| - () | 3434681..3434859 | - | 179 | NuclAT_1 | - | - |
| NMK58_RS17915 () | 3434970..3435251 | + | 282 | WP_001443927.1 | excisionase | - |
| NMK58_RS17920 () | 3435217..3436293 | + | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| - | 3436424..3436658 | + | 235 | - | - | Antitoxin Detail |
| - | 3436425..3436528 | - | 104 | - | - | Toxin Detail |
| NMK58_RS17925 () | 3436686..3437027 | - | 342 | WP_000976492.1 | YebY family protein | - |
| NMK58_RS17930 () | 3437040..3437912 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| NMK58_RS17935 () | 3437916..3438290 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| NMK58_RS17940 () | 3438429..3438659 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| NMK58_RS17945 () | 3438761..3439417 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| NMK58_RS17950 () | 3439441..3440103 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| NMK58_RS17955 () | 3440100..3442160 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| NMK58_RS17960 () | 3442369..3443028 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| NMK58_RS17965 () | 3443355..3443711 | - | 357 | WP_001295500.1 | protein YebF | - |
| NMK58_RS17970 () | 3443778..3444068 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| NMK58_RS17975 () | 3444202..3445380 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NMK58_RS17980 () | 3445436..3446077 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|