MGE detailed information
MGE type: Prophage MGE length: 57218 bp
Accession: NZ_CP101292 Location: 2755859..2813076 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Accession: NZ_CP101292 Location: 2755859..2813076 Organism: Escherichia coli strain 2003-3014 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMK58_RS14280 (2751365) | 2751365..2752891 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| NMK58_RS14285 (2752928) | 2752928..2754373 | - | 1446 | WP_001156471.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| NMK58_RS14290 (2754373) | 2754373..2755683 | - | 1311 | WP_000444947.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| NMK58_RS14295 (2755859) | 2755859..2756767 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| NMK58_RS14300 (2757097) | 2757097..2757660 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| NMK58_RS14305 (2757681) | 2757681..2758913 | - | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| NMK58_RS14310 (2759107) | 2759107..2759154 | + | 48 | WP_211180494.1 | protein YnaN | - |
| NMK58_RS14315 (2759168) | 2759168..2760151 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NMK58_RS14320 (2760624) | 2760624..2761997 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| NMK58_RS14325 (2762126) | 2762126..2763061 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NMK58_RS14330 (2763113) | 2763113..2764348 | - | 1236 | WP_000040851.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NMK58_RS14335 (2764350) | 2764350..2764565 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2764669) | 2764669..2764847 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2764669) | 2764669..2764847 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2764669) | 2764669..2764847 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2764669) | 2764669..2764847 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| NMK58_RS14340 (2764665) | 2764665..2764853 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| NMK58_RS14345 (2764891) | 2764891..2765040 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| NMK58_RS14350 (2765096) | 2765096..2765905 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| NMK58_RS14355 (2765898) | 2765898..2768498 | - | 2601 | WP_000105150.1 | exodeoxyribonuclease VIII | - |
| NMK58_RS14360 (2768600) | 2768600..2768875 | - | 276 | WP_000632297.1 | protein RacC | - |
| NMK58_RS14365 (2768950) | 2768950..2769120 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| NMK58_RS14370 (2769120) | 2769120..2769341 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| NMK58_RS14375 (2769805) | 2769805..2770961 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| NMK58_RS14380 (2771029) | 2771029..2771181 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| NMK58_RS14385 (2771480) | 2771480..2771899 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| NMK58_RS14390 (2771979) | 2771979..2772233 | + | 255 | WP_001072343.1 | hypothetical protein | - |
| NMK58_RS14395 (2772230) | 2772230..2772652 | + | 423 | WP_000693802.1 | toxin YdaT family protein | - |
| NMK58_RS14400 (2772665) | 2772665..2773522 | + | 858 | WP_000899746.1 | YdaU family protein | - |
| NMK58_RS14405 (2773529) | 2773529..2774275 | + | 747 | WP_000788968.1 | ATP-binding protein | - |
| NMK58_RS14410 (2774298) | 2774298..2775059 | + | 762 | WP_000450674.1 | DUF1627 domain-containing protein | - |
| NMK58_RS14415 (2775075) | 2775075..2775497 | + | 423 | WP_001151124.1 | DUF977 family protein | - |
| NMK58_RS14420 (2775494) | 2775494..2775790 | + | 297 | WP_001266134.1 | DUF4406 domain-containing protein | - |
| NMK58_RS14425 (2775787) | 2775787..2776248 | + | 462 | WP_001209480.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| NMK58_RS14430 (2776226) | 2776226..2776582 | + | 357 | WP_000403777.1 | hypothetical protein | - |
| NMK58_RS14435 (2776633) | 2776633..2776845 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| NMK58_RS14440 (2776878) | 2776878..2777095 | + | 218 | Protein_2817 | DUF4014 family protein | - |
| NMK58_RS14445 (2777097) | 2777097..2777360 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| NMK58_RS14450 (2777371) | 2777371..2777496 | + | 126 | Protein_2819 | hypothetical protein | - |
| NMK58_RS14455 (2778052) | 2778052..2778240 | + | 189 | WP_001496105.1 | DUF551 domain-containing protein | - |
| NMK58_RS14460 (2778356) | 2778356..2778460 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| NMK58_RS14465 (2778707) | 2778707..2778862 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NMK58_RS14470 (2779030) | 2779030..2779308 | + | 279 | WP_001341382.1 | hypothetical protein | - |
| NMK58_RS14475 (2779310) | 2779310..2780359 | + | 1050 | WP_001265060.1 | DUF968 domain-containing protein | - |
| NMK58_RS14480 (2780372) | 2780372..2780746 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NMK58_RS14485 (2780743) | 2780743..2781564 | + | 822 | WP_000762928.1 | antitermination protein | - |
| NMK58_RS14490 (2781802) | 2781802..2782164 | + | 363 | Protein_2827 | tellurite resistance TerB family protein | - |
| NMK58_RS14495 (2782161) | 2782161..2782328 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| NMK58_RS14500 (2782735) | 2782735..2784585 | + | 1851 | WP_025380333.1 | SASA family carbohydrate esterase | - |
| NMK58_RS14505 (2785024) | 2785024..2785239 | + | 216 | WP_024182511.1 | class II holin family protein | - |
| NMK58_RS14510 (2785495) | 2785495..2785767 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| NMK58_RS14515 (2785927) | 2785927..2786460 | + | 534 | WP_000544564.1 | lysozyme | - |
| NMK58_RS14520 (2786681) | 2786681..2786794 | + | 114 | WP_000675931.1 | hypothetical protein | - |
| NMK58_RS14525 (2787016) | 2787016..2787201 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| NMK58_RS14530 (2787729) | 2787729..2788043 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| NMK58_RS14535 (2788125) | 2788125..2788349 | - | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| NMK58_RS14540 (2788784) | 2788784..2789290 | + | 507 | WP_001429103.1 | terminase small subunit | - |
| NMK58_RS14545 (2789262) | 2789262..2791190 | + | 1929 | WP_024017589.1 | phage terminase large subunit family protein | - |
| NMK58_RS14550 (2791174) | 2791174..2791380 | + | 207 | WP_000258991.1 | gpW family head-tail joining protein | - |
| NMK58_RS14555 (2791377) | 2791377..2792969 | + | 1593 | WP_001430223.1 | phage portal protein | - |
| NMK58_RS14560 (2792959) | 2792959..2794464 | + | 1506 | WP_001254039.1 | S49 family peptidase | - |
| NMK58_RS14565 (2794501) | 2794501..2794848 | + | 348 | WP_000256849.1 | head decoration protein | - |
| NMK58_RS14570 (2794906) | 2794906..2795934 | + | 1029 | WP_000522642.1 | major capsid protein | - |
| NMK58_RS14575 (2795986) | 2795986..2796369 | + | 384 | WP_000201504.1 | DNA-packaging protein FI | - |
| NMK58_RS14580 (2796362) | 2796362..2796715 | + | 354 | WP_001204560.1 | head-tail joining protein | - |
| NMK58_RS14585 (2796730) | 2796730..2797263 | + | 534 | WP_000975031.1 | phage tail protein | - |
| NMK58_RS14590 (2797260) | 2797260..2797655 | + | 396 | WP_000683065.1 | phage minor tail U family protein | - |
| NMK58_RS14595 (2797663) | 2797663..2798415 | + | 753 | WP_024017534.1 | phage tail protein | - |
| NMK58_RS14600 (2798429) | 2798429..2798860 | + | 432 | WP_000479115.1 | phage minor tail protein G | - |
| NMK58_RS14605 (2798887) | 2798887..2799300 | + | 414 | WP_000533411.1 | phage tail assembly protein T | - |
| NMK58_RS14610 (2799281) | 2799281..2801860 | + | 2580 | WP_254854537.1 | phage tail tape measure protein | - |
| NMK58_RS14615 (2801857) | 2801857..2802186 | + | 330 | WP_000847304.1 | phage tail protein | - |
| NMK58_RS14620 (2802186) | 2802186..2802884 | + | 699 | WP_001152185.1 | phage minor tail protein L | - |
| NMK58_RS14625 (2802895) | 2802895..2803638 | + | 744 | WP_032325227.1 | C40 family peptidase | - |
| NMK58_RS14630 (2803635) | 2803635..2804216 | + | 582 | WP_064768481.1 | tail assembly protein | - |
| NMK58_RS14635 (2804407) | 2804407..2804934 | - | 528 | WP_000649829.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| NMK58_RS14640 (2805068) | 2805068..2808541 | + | 3474 | WP_062898222.1 | host specificity protein J | - |
| NMK58_RS14645 (2808608) | 2808608..2809207 | + | 600 | WP_001230532.1 | Outer membrane protein X | VF |
| NMK58_RS14650 (2809272) | 2809272..2810585 | + | 1314 | WP_254854538.1 | ISNCY family transposase KIS | Transposase |
| NMK58_RS14655 (2810587) | 2810587..2810856 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| NMK58_RS14660 (2811066) | 2811066..2811656 | + | 591 | WP_001429305.1 | hypothetical protein | VF |
| NMK58_RS14665 (2811706) | 2811706..2814077 | + | 2372 | Protein_2862 | hypothetical protein | VF |
| NMK58_RS14670 (2814304) | 2814304..2815317 | + | 1014 | WP_122989410.1 | type III secretion system effector zinc metalloprotease NleC | - |
| NMK58_RS14675 (2816467) | 2816467..2816901 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|