MGE detailed information
MGE type: Genomic_island MGE length: 27361 bp
Accession: NZ_CP101269 Location: 580297..607657 Organism: Escherichia coli strain EC21Z-048 Replicon: chromosome
Accession: NZ_CP101269 Location: 580297..607657 Organism: Escherichia coli strain EC21Z-048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NML18_RS02820 (575746) | 575746..576606 | + | 861 | WP_000809264.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NML18_RS02825 (576649) | 576649..577740 | - | 1092 | WP_000816998.1 | fimbrial protein | - |
| NML18_RS02830 (577751) | 577751..580267 | - | 2517 | WP_001136449.1 | fimbria/pilus outer membrane usher protein | - |
| NML18_RS02835 (580297) | 580297..580992 | - | 696 | WP_000044768.1 | GTP 3',8-cyclase | VF |
| NML18_RS02840 (581072) | 581072..581656 | - | 585 | WP_001045442.1 | Molybdopterin synthase catalytic subunit | VF |
| NML18_RS02845 (582056) | 582056..582811 | - | 756 | WP_001307409.1 | galactosamine-6-phosphate isomerase | - |
| NML18_RS02850 (582812) | 582812..583603 | - | 792 | WP_000534351.1 | PTS galactosamine transporter subunit IID | - |
| NML18_RS02855 (583593) | 583593..584396 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| NML18_RS02860 (584435) | 584435..584911 | - | 477 | WP_000098022.1 | PTS galactosamine transporter subunit IIB | - |
| NML18_RS02865 (585078) | 585078..585938 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| NML18_RS02870 (585951) | 585951..587105 | - | 1155 | WP_001125703.1 | AgaS family sugar isomerase | - |
| NML18_RS02875 (587456) | 587456..588589 | - | 1134 | WP_001324786.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| NML18_RS02880 (588586) | 588586..589020 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| NML18_RS02885 (589033) | 589033..590241 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| NML18_RS02890 (590376) | 590376..591254 | - | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NML18_RS02895 (591244) | 591244..592023 | - | 780 | WP_254837356.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NML18_RS02900 (592034) | 592034..592507 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NML18_RS02905 (592530) | 592530..593810 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NML18_RS02910 (594059) | 594059..594868 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NML18_RS02915 (594923) | 594923..595387 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NML18_RS02920 (595387) | 595387..595722 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NML18_RS02925 (595871) | 595871..597442 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| NML18_RS02930 (597817) | 597817..599151 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NML18_RS02935 (599167) | 599167..599937 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NML18_RS02940 (599967) | 599967..600857 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NML18_RS02945 (600954) | 600954..602099 | + | 1146 | WP_254837357.1 | glycerate 2-kinase | - |
| NML18_RS02955 (602864) | 602864..603844 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| NML18_RS02960 (604182) | 604182..605369 | - | 1188 | WP_074503468.1 | YhaC family protein | - |
| NML18_RS02965 (605391) | 605391..605930 | - | 540 | WP_029488669.1 | protein YhaB | - |
| NML18_RS02970 (606186) | 606186..606404 | - | 219 | WP_137499219.1 | transcriptional activator TdcR | - |
| NML18_RS02975 (606719) | 606719..607657 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NML18_RS02980 (607756) | 607756..608745 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NML18_RS02985 (608767) | 608767..610098 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| NML18_RS02990 (610124) | 610124..611332 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|