NZ_CP1012411..85310

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 85310 bp
Accession: NZ_CP101241        Location: 1..85310         Organism: Escherichia coli strain EC21Z-101       Replicon: plasmid pEC21Z101-85K


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NML23_RS22725 (1) 1..1032 + 1032 WP_048257187.1 plasmid replication initiator RepA -
NML23_RS22730 (1730) 1730..1888 + 159 WP_038349023.1 hypothetical protein -
NML23_RS22735 (1943) 1943..2212 + 270 WP_032291093.1 type II toxin-antitoxin system antitoxin YacA Antitoxin Detail
NML23_RS22740 (2212) 2212..2490 + 279 WP_001384452.1 type II toxin-antitoxin system toxin YacB Toxin Detail
NML23_RS22745 (2530) 2530..3378 + 849 WP_032291092.1 3'-5' exonuclease -
NML23_RS22750 (3694) 3694..4203 - 510 WP_032291091.1 hypothetical protein -
NML23_RS22755 (4259) 4259..4861 - 603 WP_000517687.1 ProQ/FINO family protein -
NML23_RS22760 (5214) 5214..6560 + 1347 WP_063118133.1 protein YagA -
NML23_RS22765 (7099) 7099..7401 - 303 WP_001245884.1 hypothetical protein -
NML23_RS22770 (7398) 7398..8024 - 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
NML23_RS22775 (8228) 8228..9499 - 1272 WP_014065711.1 Y-family DNA polymerase -
NML23_RS22780 (9499) 9499..9936 - 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NML23_RS22785 (9933) 9933..10181 - 249 WP_000618110.1 DinI-like family protein -
NML23_RS22790 (10599) 10599..11501 + 903 WP_001739825.1 DUF1281 domain-containing protein -
NML23_RS22795 (11505) 11505..11591 + 87 Protein_14 hypothetical protein -
NML23_RS22800 (11596) 11596..11931 - 336 WP_001340323.1 hypothetical protein -
NML23_RS22805 (12269) 12269..13249 + 981 WP_012783921.1 plasmid segregation protein ParM -
NML23_RS22810 (13252) 13252..13674 + 423 WP_000774832.1 plasmid partitioning/stability family protein -
NML23_RS22815 (13678) 13678..13989 + 312 WP_033863049.1 hypothetical protein -
NML23_RS22820 (14065) 14065..14748 + 684 WP_137467167.1 DNA methylase -
NML23_RS22825 (14749) 14749..14970 + 222 WP_001104873.1 hypothetical protein -
NML23_RS22830 (14900) 14900..15418 + 519 WP_231530587.1 DUF1380 family protein -
NML23_RS22835 (15463) 15463..16233 + 771 WP_089438460.1 hypothetical protein -
NML23_RS22840 (16649) 16649..17074 + 426 WP_001198900.1 antirestriction protein -
NML23_RS22845 (17121) 17121..17543 + 423 WP_000271688.1 DUF1380 family protein -
NML23_RS22850 (17540) 17540..17731 + 192 WP_001027516.1 hypothetical protein -
NML23_RS22855 (17869) 17869..18117 + 249 WP_001354012.1 hypothetical protein -
NML23_RS22860 (18501) 18501..19028 + 528 WP_021532391.1 single-stranded DNA-binding protein -
NML23_RS22865 (19086) 19086..19319 + 234 WP_000006024.1 DUF905 domain-containing protein -
NML23_RS22870 (19378) 19378..21336 + 1959 WP_001401579.1 ParB/RepB/Spo0J family partition protein -
NML23_RS22875 (21391) 21391..21825 + 435 WP_001578018.1 conjugation system SOS inhibitor PsiB -
NML23_RS22880 (21822) 21822..22541 + 720 WP_001276270.1 plasmid SOS inhibition protein A -
NML23_RS22885 (22538) 22538..23134 + 597 WP_000977998.1 hypothetical protein -
NML23_RS22890 (23596) 23596..24096 + 501 WP_014065718.1 antirestriction protein ArdA -
NML23_RS22895 (24828) 24828..25262 + 435 WP_000218858.1 hypothetical protein -
NML23_RS22900 (25356) 25356..25622 + 267 WP_000804663.1 hypothetical protein -
NML23_RS22905 (25799) 25799..26188 + 390 WP_000833767.1 hypothetical protein -
NML23_RS22910 (26185) 26185..27086 + 902 Protein_37 Recombination-promoting nuclease RpnD VF
NML23_RS22915 (27148) 27148..27354 + 207 WP_000150314.1 hypothetical protein VF
NML23_RS22920 (27385) 27385..27636 - 252 WP_000148285.1 helix-turn-helix transcriptional regulator -
NML23_RS22925 (28216) 28216..29064 + 849 WP_089438462.1 DUF4942 domain-containing protein -
NML23_RS22930 (29150) 29150..29485 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
NML23_RS22935 (29719) 29719..30051 + 333 WP_063119516.1 IncI1-type relaxosome accessory protein NikA -
NML23_RS22940 (30062) 30062..32761 + 2700 WP_011264053.1 hypothetical protein Relaxase
NML23_RS22945 (32798) 32798..35089 - 2292 WP_011264051.1 F-type conjugative transfer protein TrbC -
NML23_RS22950 (35082) 35082..36152 - 1071 WP_000151590.1 IncI1-type conjugal transfer protein TrbB -
NML23_RS22955 (36171) 36171..37379 - 1209 WP_011264049.1 IncI1-type conjugal transfer protein TrbA -
- (37559) 37559..37616 - 58 NuclAT_1 - -
- (37559) 37559..37616 - 58 NuclAT_1 - -
- (37559) 37559..37616 - 58 NuclAT_1 - -
- (37559) 37559..37616 - 58 NuclAT_1 - -
NML23_RS22960 (37686) 37686..38771 - 1086 WP_072108863.1 protein finQ -
- (38980) 38980..39040 - 61 NuclAT_0 - Antitoxin Detail
- (38980) 38980..39040 - 61 NuclAT_0 - Antitoxin Detail
- (38980) 38980..39040 - 61 NuclAT_0 - Antitoxin Detail
- (38980) 38980..39040 - 61 NuclAT_0 - Antitoxin Detail
NML23_RS22965 (39092) 39092..39244 + 153 WP_001387489.1 Hok/Gef family protein Toxin Detail
NML23_RS22970 (39316) 39316..39567 - 252 WP_001291964.1 hypothetical protein -
NML23_RS22975 (39867) 39867..40163 + 297 WP_011264046.1 DinQ-like type I toxin DqlB -
NML23_RS22980 (40228) 40228..40404 - 177 WP_001054900.1 hypothetical protein -
NML23_RS22985 (40796) 40796..41005 + 210 WP_000062603.1 HEAT repeat domain-containing protein -
NML23_RS22990 (41077) 41077..41727 - 651 WP_001178506.1 plasmid IncI1-type surface exclusion protein ExcA -
NML23_RS22995 (41801) 41801..43969 - 2169 WP_000698357.1 DotA/TraY family protein -
NML23_RS23000 (44066) 44066..44650 - 585 WP_001037987.1 IncI1-type conjugal transfer protein TraX -
NML23_RS23005 (44679) 44679..45881 - 1203 WP_001189160.1 IncI1-type conjugal transfer protein TraW -
NML23_RS23010 (45848) 45848..46462 - 615 WP_000337399.1 IncI1-type conjugal transfer protein TraV -
NML23_RS23015 (46462) 46462..49506 - 3045 WP_001024780.1 IncI1-type conjugal transfer protein TraU -
NML23_RS23020 (49596) 49596..50396 - 801 WP_001164783.1 IncI1-type conjugal transfer protein TraT -
NML23_RS23025 (50380) 50380..50568 - 189 WP_001277253.1 putative conjugal transfer protein TraS -
NML23_RS23030 (50632) 50632..51036 - 405 WP_000086965.1 IncI1-type conjugal transfer protein TraR -
NML23_RS23035 (51087) 51087..51614 - 528 WP_001055569.1 conjugal transfer protein TraQ -
NML23_RS23040 (51614) 51614..52318 - 705 WP_000801920.1 IncI1-type conjugal transfer protein TraP -
NML23_RS23045 (52318) 52318..53607 - 1290 WP_001535701.1 conjugal transfer protein TraO -
NML23_RS23050 (53610) 53610..54593 - 984 WP_001191878.1 hypothetical protein VF
NML23_RS23055 (54604) 54604..55296 - 693 WP_000138552.1 DotI/IcmL family type IV secretion protein -
NML23_RS23060 (55293) 55293..55640 - 348 WP_001055900.1 conjugal transfer protein -
NML23_RS23065 (55658) 55658..59425 - 3768 WP_001141534.1 DUF5710 domain-containing protein -
NML23_RS23070 (59515) 59515..60066 - 552 WP_000014584.1 Phospholipase D VF
NML23_RS23075 (60081) 60081..60371 - 291 WP_001299214.1 hypothetical protein -
NML23_RS23080 (60368) 60368..61516 - 1149 WP_078207115.1 putative protein YggR VF
NML23_RS23085 (61513) 61513..62331 - 819 WP_052962236.1 hypothetical protein VF
NML23_RS23090 (62328) 62328..62786 - 459 WP_001079808.1 hypothetical protein VF
NML23_RS23095 (63181) 63181..63765 - 585 WP_000977522.1 histidine phosphatase family protein -
NML23_RS23100 (63825) 63825..65027 - 1203 WP_208285465.1 conjugal transfer protein TraF -
NML23_RS23105 (65113) 65113..65937 - 825 WP_001238932.1 conjugal transfer protein TraE -
NML23_RS23110 (66088) 66088..67242 - 1155 WP_001139955.1 site-specific integrase -
NML23_RS23115 (67241) 67241..67594 + 354 WP_078207114.1 shufflon protein D' -
NML23_RS23120 (68763) 68763..69011 + 249 WP_001349157.1 hypothetical protein -
NML23_RS23125 (69008) 69008..70300 - 1293 WP_001619585.1 hypothetical protein VF
NML23_RS23130 (70300) 70300..70956 - 657 WP_001193549.1 hypothetical protein VF
NML23_RS23135 (70941) 70941..71501 - 561 WP_000014005.1 hypothetical protein VF
NML23_RS23140 (71511) 71511..72125 - 615 WP_217822941.1 hypothetical protein VF
NML23_RS23145 (72142) 72142..73227 - 1086 WP_001208802.1 hypothetical protein VF
NML23_RS23150 (73240) 73240..74793 - 1554 WP_063118132.1 hypothetical protein VF
NML23_RS23155 (74804) 74804..75256 - 453 WP_001247337.1 hypothetical protein VF
NML23_RS23160 (75243) 75243..76538 - 1296 WP_000752780.1 type 4b pilus protein PilO2 -
NML23_RS23165 (76531) 76531..78213 - 1683 WP_000748143.1 hypothetical protein VF
NML23_RS23170 (78227) 78227..78664 - 438 WP_000539811.1 hypothetical protein VF
NML23_RS23175 (78664) 78664..79731 - 1068 WP_032321486.1 hypothetical protein VF
NML23_RS23180 (80355) 80355..80651 - 297 WP_050571830.1 hypothetical protein -
NML23_RS23185 (80818) 80818..81072 - 255 WP_001136187.1 PilI type IV pilus biogenesis protein -
NML23_RS23190 (81234) 81234..81785 - 552 WP_000744644.1 hypothetical protein -
NML23_RS23195 (81958) 81958..82641 - 684 WP_000213859.1 conjugal transfer protein TraC -
NML23_RS23200 (82895) 82895..83428 - 534 WP_001303319.1 transcription termination/antitermination NusG family protein -
NML23_RS23205 (83870) 83870..84157 - 288 WP_000074855.1 conjugal transfer protein TraA -
NML23_RS23210 (84195) 84195..84353 - 159 Protein_97 ash family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance