MGE detailed information
MGE type: Genomic_island MGE length: 24578 bp
Accession: NZ_CP101176 Location: 1224045..1248622 Organism: Xanthomonas campestris pv. campestris strain CN08 Replicon: chromosome
Accession: NZ_CP101176 Location: 1224045..1248622 Organism: Xanthomonas campestris pv. campestris strain CN08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCCCN08v2_RS05115 | 1219664..1220449 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| XCCCN08v2_RS05120 | 1220595..1221389 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| XCCCN08v2_RS05125 | 1221438..1221638 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| XCCCN08v2_RS05130 | 1221827..1223611 | + | 1785 | WP_075285404.1 | autotransporter domain-containing protein | - |
| XCCCN08v2_RS05140 | 1224045..1224461 | + | 417 | WP_227971334.1 | hypothetical protein | - |
| XCCCN08v2_RS05145 | 1224751..1224981 | - | 231 | WP_157769280.1 | hypothetical protein | - |
| XCCCN08v2_RS05150 | 1225045..1225200 | + | 156 | WP_075285405.1 | hypothetical protein | - |
| XCCCN08v2_RS05155 | 1225377..1225772 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| XCCCN08v2_RS05160 | 1225863..1226255 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| XCCCN08v2_RS05165 | 1226780..1228909 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| XCCCN08v2_RS05170 | 1229402..1230277 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| XCCCN08v2_RS05175 | 1230927..1231604 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| XCCCN08v2_RS05180 | 1231597..1232931 | + | 1335 | WP_162808569.1 | HAMP domain-containing sensor histidine kinase | - |
| XCCCN08v2_RS05185 | 1233074..1233565 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| XCCCN08v2_RS05190 | 1233562..1233852 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| XCCCN08v2_RS05195 | 1233927..1234328 | - | 402 | WP_040940795.1 | SymE family type I addiction module toxin | - |
| XCCCN08v2_RS05200 | 1234471..1235579 | + | 1109 | WP_087942068.1 | IS3 family transposase ISXca2 | Transposase |
| XCCCN08v2_RS05205 | 1236064..1236687 | - | 624 | WP_075285407.1 | dephospho-CoA kinase | - |
| XCCCN08v2_RS05210 | 1236701..1237564 | - | 864 | WP_075285408.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| XCCCN08v2_RS05215 | 1237570..1238826 | - | 1257 | WP_075285409.1 | Type II secretion system protein F | VF |
| XCCCN08v2_RS05220 | 1239163..1239612 | + | 450 | WP_075285410.1 | Fimbrial protein | VF |
| XCCCN08v2_RS05225 | 1239692..1240102 | + | 411 | WP_075285411.1 | pilin | - |
| XCCCN08v2_RS05230 | 1240161..1241867 | + | 1707 | WP_187305920.1 | hypothetical protein | VF |
| XCCCN08v2_RS05235 | 1242285..1243679 | - | 1395 | WP_162808570.1 | Regulatory protein AtoC | VF |
| XCCCN08v2_RS05240 | 1243889..1245499 | - | 1611 | WP_040940804.1 | Adaptive-response sensory-kinase SasA | VF |
| XCCCN08v2_RS05245 | 1245733..1246902 | + | 1170 | WP_011038209.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| XCCCN08v2_RS05250 | 1246927..1247802 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| XCCCN08v2_RS05255 | 1248032..1248316 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| XCCCN08v2_RS05260 | 1248320..1248622 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XCCCN08v2_RS05265 | 1248622..1250277 | + | 1656 | WP_162808571.1 | NAD+ synthase | - |
| XCCCN08v2_RS05270 | 1250271..1251257 | - | 987 | WP_050911329.1 | hypothetical protein | - |
| XCCCN08v2_RS05275 | 1251709..1252590 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|