MGE detailed information
MGE type: Conjugative plasmid MGE length: 88662 bp
Accession: NZ_CP100741 Location: 1..88662 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: plasmid pR18.0292_89k
Accession: NZ_CP100741 Location: 1..88662 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: plasmid pR18.0292_89k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL736_RS24385 (1) | 1..1032 | + | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| NL736_RS24390 (1937) | 1937..2221 | + | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NL736_RS24395 (2221) | 2221..2496 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NL736_RS24400 (2751) | 2751..3002 | - | 252 | Protein_3 | hypothetical protein | - |
| NL736_RS24405 (2965) | 2965..3939 | - | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| NL736_RS24410 (4118) | 4118..4720 | - | 603 | WP_094308828.1 | ProQ/FINO family protein | - |
| NL736_RS24415 (4896) | 4896..5948 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| NL736_RS24420 (6160) | 6160..6750 | - | 591 | WP_102000831.1 | hypothetical protein | - |
| NL736_RS24425 (6750) | 6750..7007 | - | 258 | WP_094308825.1 | hypothetical protein | - |
| NL736_RS24430 (7577) | 7577..7891 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| NL736_RS24435 (7953) | 7953..8723 | + | 771 | WP_001499400.1 | hypothetical protein | - |
| NL736_RS24440 (8768) | 8768..9553 | + | 786 | WP_077248910.1 | site-specific integrase | - |
| NL736_RS24445 (9691) | 9691..9966 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| NL736_RS24450 (9960) | 9960..10604 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| NL736_RS24455 (10833) | 10833..11804 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| NL736_RS24460 (11809) | 11809..12201 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| NL736_RS24465 (12206) | 12206..13477 | - | 1272 | WP_105910596.1 | Y-family DNA polymerase | - |
| NL736_RS24470 (13477) | 13477..13914 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL736_RS24475 (13911) | 13911..14159 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NL736_RS24480 (14577) | 14577..15479 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| NL736_RS24485 (15476) | 15476..15787 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| NL736_RS24490 (15864) | 15864..16547 | + | 684 | WP_001774186.1 | DNA methylase | - |
| NL736_RS24495 (16548) | 16548..16769 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| NL736_RS24500 (16750) | 16750..17217 | + | 468 | WP_227661723.1 | DUF1380 family protein | - |
| NL736_RS24505 (17263) | 17263..18039 | + | 777 | WP_117064822.1 | hypothetical protein | - |
| NL736_RS24510 (18450) | 18450..18875 | + | 426 | WP_142777227.1 | antirestriction protein | - |
| NL736_RS24515 (18922) | 18922..19344 | + | 423 | WP_117064820.1 | DUF1380 family protein | - |
| NL736_RS24520 (19341) | 19341..19532 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| NL736_RS24525 (19684) | 19684..19917 | + | 234 | WP_254534425.1 | hypothetical protein | - |
| NL736_RS24530 (20301) | 20301..20828 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| NL736_RS24535 (20885) | 20885..21118 | + | 234 | WP_024261882.1 | DUF905 domain-containing protein | - |
| NL736_RS24540 (21180) | 21180..23138 | + | 1959 | WP_094308811.1 | ParB/RepB/Spo0J family partition protein | - |
| NL736_RS24545 (23193) | 23193..23627 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| NL736_RS24550 (23624) | 23624..24064 | + | 441 | Protein_33 | IS6 family transposase IS15 | Transposase |
| NL736_RS24555 (24130) | 24130..24834 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NL736_RS24560 (24885) | 24885..25265 | - | 381 | Protein_35 | IS91 family transposase ISPps1 | Transposase |
| NL736_RS24565 (25476) | 25476..25700 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| NL736_RS24570 (25697) | 25697..26407 | - | 711 | WP_194433555.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NL736_RS24575 (26827) | 26827..27732 | + | 906 | WP_052259183.1 | Ribosomal RNA small subunit methyltransferase A | ARG |
| NL736_RS24580 (27770) | 27770..27913 | + | 144 | Protein_39 | helix-turn-helix domain-containing protein | - |
| NL736_RS24585 (27978) | 27978..28235 | + | 258 | Protein_40 | IS6 family transposase IS15DII | Transposase |
| NL736_RS24590 (28299) | 28299..29003 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NL736_RS24595 (29056) | 29056..29520 | + | 465 | Protein_42 | hypothetical protein | - |
| NL736_RS24600 (29982) | 29982..30482 | + | 501 | WP_077900469.1 | antirestriction protein ArdA | - |
| NL736_RS24605 (31211) | 31211..31645 | + | 435 | WP_117064810.1 | post-segregation killing protein PndC | - |
| NL736_RS24610 (31738) | 31738..32004 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NL736_RS24615 (32069) | 32069..32983 | + | 915 | WP_117064811.1 | Recombination-promoting nuclease RpnA | VF |
| NL736_RS24620 (32983) | 32983..33228 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| NL736_RS24625 (33259) | 33259..33510 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| NL736_RS24630 (34089) | 34089..34937 | + | 849 | WP_117064812.1 | DUF4942 domain-containing protein | - |
| NL736_RS24635 (35023) | 35023..35358 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NL736_RS24640 (35592) | 35592..35924 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NL736_RS24645 (35935) | 35935..38634 | + | 2700 | WP_117064813.1 | Protein TraI | Relaxase |
| NL736_RS24650 (38671) | 38671..40962 | - | 2292 | WP_077265944.1 | F-type conjugative transfer protein TrbC | - |
| NL736_RS24655 (40955) | 40955..42025 | - | 1071 | WP_064148470.1 | IncI1-type conjugal transfer protein TrbB | - |
| NL736_RS24660 (42044) | 42044..43252 | - | 1209 | WP_064148469.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (43432) | 43432..43492 | - | 61 | NuclAT_0 | - | - |
| - (43432) | 43432..43492 | - | 61 | NuclAT_0 | - | - |
| - (43432) | 43432..43492 | - | 61 | NuclAT_0 | - | - |
| - (43432) | 43432..43492 | - | 61 | NuclAT_0 | - | - |
| - (43432) | 43432..43492 | - | 61 | NuclAT_0 | - | - |
| NL736_RS24665 (43551) | 43551..43703 | - | 153 | Protein_56 | IS66 family insertion sequence element accessory protein TnpB | - |
| NL736_RS24670 (43700) | 43700..44104 | - | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| - (44596) | 44596..44647 | - | 52 | NuclAT_1 | - | - |
| - (44596) | 44596..44647 | - | 52 | NuclAT_1 | - | - |
| - (44596) | 44596..44647 | - | 52 | NuclAT_1 | - | - |
| - (44596) | 44596..44647 | - | 52 | NuclAT_1 | - | - |
| - (44596) | 44596..44647 | - | 52 | NuclAT_1 | - | - |
| NL736_RS24675 (45536) | 45536..45712 | - | 177 | WP_180335155.1 | hypothetical protein | - |
| NL736_RS24680 (46105) | 46105..46314 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NL736_RS24685 (46386) | 46386..47048 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL736_RS24690 (47119) | 47119..49287 | - | 2169 | WP_064148468.1 | DotA/TraY family protein | - |
| NL736_RS24695 (49384) | 49384..49968 | - | 585 | WP_117064814.1 | IncI1-type conjugal transfer protein TraX | - |
| NL736_RS24700 (49997) | 49997..51199 | - | 1203 | WP_064148466.1 | IncI1-type conjugal transfer protein TraW | - |
| NL736_RS24705 (51166) | 51166..51780 | - | 615 | WP_001542516.1 | IncI1-type conjugal transfer protein TraV | - |
| NL736_RS24710 (51780) | 51780..54824 | - | 3045 | WP_064148465.1 | IncI1-type conjugal transfer protein TraU | - |
| NL736_RS24715 (54914) | 54914..55714 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NL736_RS24720 (55698) | 55698..55886 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NL736_RS24725 (55950) | 55950..56354 | - | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| NL736_RS24730 (56405) | 56405..56932 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NL736_RS24735 (56932) | 56932..57636 | - | 705 | WP_042012199.1 | IncI1-type conjugal transfer protein TraP | - |
| NL736_RS24740 (57636) | 57636..58925 | - | 1290 | WP_064148464.1 | conjugal transfer protein TraO | - |
| NL736_RS24745 (58928) | 58928..59911 | - | 984 | WP_064148463.1 | hypothetical protein | VF |
| NL736_RS24750 (59922) | 59922..60614 | - | 693 | WP_064148462.1 | DotI/IcmL family type IV secretion protein | - |
| NL736_RS24755 (60611) | 60611..60958 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NL736_RS24760 (60976) | 60976..64743 | - | 3768 | WP_064148461.1 | DUF5710 domain-containing protein | - |
| NL736_RS24765 (64833) | 64833..65384 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| NL736_RS24770 (65399) | 65399..65689 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NL736_RS24775 (65686) | 65686..66834 | - | 1149 | WP_001024975.1 | putative protein YggR | VF |
| NL736_RS24780 (66831) | 66831..67649 | - | 819 | WP_064148460.1 | hypothetical protein | VF |
| NL736_RS24785 (67646) | 67646..68104 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NL736_RS24790 (68499) | 68499..69083 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NL736_RS24795 (69143) | 69143..70345 | - | 1203 | WP_064148458.1 | conjugal transfer protein TraF | - |
| NL736_RS24800 (70431) | 70431..71255 | - | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| NL736_RS24805 (71406) | 71406..72560 | - | 1155 | WP_064148474.1 | site-specific integrase | - |
| NL736_RS24810 (72878) | 72878..73135 | - | 258 | Protein_85 | hypothetical protein | - |
| NL736_RS24815 (73414) | 73414..74505 | - | 1092 | Protein_86 | hypothetical protein | VF |
| NL736_RS24820 (74505) | 74505..75161 | - | 657 | WP_074182772.1 | hypothetical protein | VF |
| NL736_RS24825 (75146) | 75146..75706 | - | 561 | WP_063124165.1 | hypothetical protein | VF |
| NL736_RS24830 (75716) | 75716..76330 | - | 615 | WP_064148457.1 | hypothetical protein | VF |
| NL736_RS24835 (76347) | 76347..77432 | - | 1086 | WP_063103211.1 | hypothetical protein | VF |
| NL736_RS24840 (77445) | 77445..78998 | - | 1554 | WP_042012074.1 | hypothetical protein | VF |
| NL736_RS24845 (79009) | 79009..79461 | - | 453 | WP_074182770.1 | hypothetical protein | VF |
| NL736_RS24850 (79448) | 79448..80743 | - | 1296 | WP_064148456.1 | type 4b pilus protein PilO2 | - |
| NL736_RS24855 (80736) | 80736..82418 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NL736_RS24860 (82432) | 82432..82869 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| NL736_RS24865 (82869) | 82869..83936 | - | 1068 | WP_074182768.1 | hypothetical protein | VF |
| NL736_RS24870 (84557) | 84557..84844 | - | 288 | WP_074182766.1 | pilJ | - |
| NL736_RS24875 (84887) | 84887..85141 | - | 255 | WP_074182765.1 | PilI type IV pilus biogenesis protein | - |
| NL736_RS24880 (85313) | 85313..85996 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| NL736_RS24885 (86249) | 86249..86782 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| NL736_RS24890 (87224) | 87224..87511 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| NL736_RS24895 (87429) | 87429..87659 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|