MGE detailed information
MGE type: Genomic_island MGE length: 10331 bp
Accession: NZ_CP100736 Location: 1017474..1027804 Organism: Salmonella enterica subsp. enterica serovar Agona strain R18.1477 Replicon: chromosome
Accession: NZ_CP100736 Location: 1017474..1027804 Organism: Salmonella enterica subsp. enterica serovar Agona strain R18.1477 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL742_RS04875 (1014023) | 1014023..1014444 | + | 422 | Protein_955 | cytoplasmic protein | - |
| NL742_RS04880 (1014612) | 1014612..1014851 | + | 240 | Protein_956 | hypothetical protein | - |
| NL742_RS04885 (1015008) | 1015008..1015676 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| NL742_RS04890 (1015703) | 1015703..1016197 | + | 495 | WP_000424943.1 | hypothetical protein | - |
| NL742_RS04895 (1016442) | 1016442..1017098 | - | 657 | WP_000420449.1 | protein-serine/threonine phosphatase | - |
| NL742_RS04900 (1017448) | 1017448..1017650 | + | 203 | Protein_960 | IS5 family transposase ISEcl3 | Transposase |
| NL742_RS04905 (1017723) | 1017723..1018250 | - | 528 | WP_000971656.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NL742_RS04910 (1018247) | 1018247..1018537 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NL742_RS04915 (1019130) | 1019130..1019456 | + | 327 | WP_000393296.1 | hypothetical protein | - |
| NL742_RS04920 (1019729) | 1019729..1020076 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| NL742_RS04925 (1020061) | 1020061..1020510 | - | 450 | WP_000381619.1 | hypothetical protein | - |
| NL742_RS04930 (1020942) | 1020942..1021385 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| NL742_RS04935 (1021841) | 1021841..1022491 | + | 651 | WP_001747511.1 | Invasion protein InvF | VF |
| NL742_RS04940 (1022488) | 1022488..1024176 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NL742_RS04945 (1024173) | 1024173..1025291 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NL742_RS04950 (1025316) | 1025316..1027373 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NL742_RS04955 (1027397) | 1027397..1027804 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NL742_RS04960 (1027801) | 1027801..1029096 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NL742_RS04965 (1029074) | 1029074..1029517 | + | 444 | WP_001747512.1 | SPI-1 type III secretion system protein SpaM | - |
| NL742_RS04970 (1029517) | 1029517..1030527 | + | 1011 | WP_000503107.1 | SPI-1 type III secretion system protein SpaN | - |
| NL742_RS04975 (1030527) | 1030527..1031438 | + | 912 | WP_000058725.1 | SPI-1 type III secretion system protein SpaO | - |
| NL742_RS04980 (1031428) | 1031428..1032102 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NL742_RS04985 (1032128) | 1032128..1032388 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.009 |