MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64326 bp
Accession: NZ_CP100725 Location: 1..64326 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain R17.1476 Replicon: plasmid pR17.1476_64k
Accession: NZ_CP100725 Location: 1..64326 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain R17.1476 Replicon: plasmid pR17.1476_64k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL714_RS23265 (NL714_23265) | 1..882 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| NL714_RS23270 (NL714_23270) | 1765..1959 | + | 195 | Protein_1 | SdiA-regulated domain-containing protein | - |
| NL714_RS23275 (NL714_23275) | 2056..2802 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| NL714_RS23280 (NL714_23280) | 3068..3625 | - | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| NL714_RS23285 (NL714_23285) | 3715..4560 | - | 846 | WP_001701740.1 | YjiK family protein | - |
| NL714_RS23290 (NL714_23290) | 4611..4757 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| NL714_RS23295 (NL714_23295) | 4747..5403 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| NL714_RS23300 (NL714_23300) | 5647..5997 | - | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| NL714_RS23305 (NL714_23305) | 5982..6194 | - | 213 | WP_000004289.1 | hypothetical protein | VF |
| NL714_RS23310 (NL714_23310) | 6454..7395 | - | 942 | WP_223156944.1 | hypothetical protein | - |
| NL714_RS23315 (NL714_23315) | 7491..8069 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| NL714_RS23320 (NL714_23320) | 8066..8758 | - | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| NL714_RS23325 (NL714_23325) | 8751..11159 | - | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| NL714_RS23330 (NL714_23330) | 11386..11910 | - | 525 | WP_000748204.1 | hypothetical protein | VF |
| NL714_RS23335 (NL714_23335) | 12185..12487 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| NL714_RS23340 (NL714_23340) | 12516..12827 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| NL714_RS23345 (NL714_23345) | 13194..13580 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| NL714_RS23350 (NL714_23350) | 13633..13752 | + | 120 | Protein_17 | recombinase | - |
| NL714_RS23355 (NL714_23355) | 14121..15110 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| NL714_RS23360 (NL714_23360) | 15604..15899 | - | 296 | Protein_19 | cytoplasmic protein | - |
| NL714_RS23365 (NL714_23365) | 15911..16339 | + | 429 | Protein_20 | hypothetical protein | - |
| NL714_RS23370 (NL714_23370) | 16383..16904 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| NL714_RS23375 (NL714_23375) | 17580..17798 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NL714_RS23380 (NL714_23380) | 17800..18105 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NL714_RS23385 (NL714_23385) | 18107..18397 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| NL714_RS23390 (NL714_23390) | 18394..18915 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| NL714_RS23395 (NL714_23395) | 18950..19732 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| NL714_RS23400 (NL714_23400) | 19741..20454 | + | 714 | WP_000545756.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| NL714_RS23405 (NL714_23405) | 20479..20967 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| NL714_RS23410 (NL714_23410) | 20961..21446 | + | 486 | WP_000905606.1 | membrane protein | - |
| NL714_RS23415 (NL714_23415) | 21723..22010 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| NL714_RS23420 (NL714_23420) | 22166..22726 | + | 561 | WP_000900095.1 | Invasin | VF |
| NL714_RS23425 (NL714_23425) | 22793..23143 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NL714_RS23430 (NL714_23430) | 23200..23625 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NL714_RS23435 (NL714_23435) | 23752..24402 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| NL714_RS23440 (NL714_23440) | 24664..25389 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| NL714_RS23445 (NL714_23445) | 25670..27445 | - | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| NL714_RS23450 (NL714_23450) | 27497..27664 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| NL714_RS23455 (NL714_23455) | 27627..28394 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| NL714_RS23460 (NL714_23460) | 28568..28732 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| NL714_RS23465 (NL714_23465) | 28906..29799 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| NL714_RS23470 (NL714_23470) | 30407..31444 | + | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| NL714_RS23475 (NL714_23475) | 31633..32658 | - | 1026 | WP_077907510.1 | ExeA family protein | - |
| NL714_RS23480 (NL714_23480) | 32591..34255 | - | 1665 | WP_000098781.1 | IS481 family transposase ISAzs36 | Transposase |
| NL714_RS23485 (NL714_23485) | 34239..34799 | - | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
| NL714_RS23490 (NL714_23490) | 35006..35746 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| NL714_RS23495 (NL714_23495) | 36401..36889 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| NL714_RS23500 (NL714_23500) | 37147..38262 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| NL714_RS23505 (NL714_23505) | 38348..38764 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| NL714_RS23510 (NL714_23510) | 38867..39283 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| NL714_RS23515 (NL714_23515) | 39340..39945 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| NL714_RS23520 (NL714_23520) | 39942..40883 | - | 942 | WP_000728919.1 | ISNCY family transposase ISSen7 | VF |
| NL714_RS23525 (NL714_23525) | 41298..42503 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| NL714_RS23530 (NL714_23530) | 42503..43477 | + | 975 | WP_000064277.1 | ParB family protein | - |
| NL714_RS23535 (NL714_23535) | 43559..44833 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| NL714_RS23540 (NL714_23540) | 44833..45255 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL714_RS23545 (NL714_23545) | 45556..47277 | + | 1722 | Protein_56 | ParB/RepB/Spo0J family partition protein | - |
| NL714_RS23550 (NL714_23550) | 47317..47418 | + | 102 | Protein_57 | conjugation system SOS inhibitor PsiB | - |
| NL714_RS23555 (NL714_23555) | 47421..48077 | + | 657 | Protein_58 | plasmid SOS inhibition protein A | - |
| NL714_RS23560 (NL714_23560) | 48283..49143 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NL714_RS23565 (NL714_23565) | 49326..49883 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NL714_RS23570 (NL714_23570) | 50047..53052 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NL714_RS23575 (NL714_23575) | 53281..53439 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| NL714_RS23580 (NL714_23580) | 53542..54360 | + | 819 | Protein_63 | DUF945 domain-containing protein | - |
| NL714_RS23585 (NL714_23585) | 54671..55141 | - | 471 | WP_015056628.1 | hypothetical protein | VF |
| NL714_RS23590 (NL714_23590) | 55557..55937 | + | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NL714_RS23595 (NL714_23595) | 56131..56816 | + | 686 | Protein_66 | PAS domain-containing protein | - |
| NL714_RS23600 (NL714_23600) | 56910..57137 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| NL714_RS23605 (NL714_23605) | 57179..57541 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| NL714_RS23610 (NL714_23610) | 57556..57867 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| NL714_RS23615 (NL714_23615) | 57889..58455 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| NL714_RS23620 (NL714_23620) | 58442..59182 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| NL714_RS23625 (NL714_23625) | 59182..60603 | + | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NL714_RS23630 (NL714_23630) | 60593..61188 | + | 596 | Protein_73 | conjugal transfer protein TraP | - |
| NL714_RS23635 (NL714_23635) | 61166..61390 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| NL714_RS23640 (NL714_23640) | 61387..61901 | + | 515 | Protein_75 | type IV conjugative transfer system lipoprotein TraV | - |
| NL714_RS23645 (NL714_23645) | 61981..62403 | + | 423 | Protein_76 | fertility inhibition protein FinO | - |
| NL714_RS23650 (NL714_23650) | 62520..62801 | + | 282 | Protein_77 | disulfide bond formation protein DsbA | - |
| NL714_RS23655 (NL714_23655) | 63082..63642 | + | 561 | Protein_78 | phospholipase D family protein | - |
| NL714_RS23660 (NL714_23660) | 63753..64019 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| NL714_RS23665 (NL714_23665) | 64142..64326 | + | 185 | Protein_80 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|