MGE detailed information
MGE type: Genomic_island MGE length: 43365 bp
Accession: NZ_CP100702 Location: 3591437..3634801 Organism: Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 Replicon: chromosome
Accession: NZ_CP100702 Location: 3591437..3634801 Organism: Salmonella enterica subsp. enterica serovar Thompson strain R18.0872 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL734_RS17755 () | 3587069..3589513 | + | 2445 | WP_017465810.1 | acyl-CoA dehydrogenase FadE | - |
| NL734_RS17760 () | 3589622..3590389 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NL734_RS17765 () | 3590699..3591106 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NL734_RS17770 () | 3591437..3592156 | + | 720 | WP_000787603.1 | hypothetical protein | VF |
| NL734_RS17775 () | 3592160..3592375 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NL734_RS17780 () | 3592495..3593442 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NL734_RS17785 () | 3593936..3594176 | - | 241 | Protein_3477 | PerC family transcriptional regulator | - |
| NL734_RS17790 () | 3594259..3595080 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| NL734_RS17795 () | 3595486..3595956 | - | 471 | WP_017465811.1 | AfaD family invasin | - |
| NL734_RS17800 () | 3595978..3598488 | - | 2511 | WP_065680806.1 | hypothetical protein | VF |
| NL734_RS17805 () | 3598512..3599252 | - | 741 | WP_017465813.1 | hypothetical protein | VF |
| NL734_RS17810 () | 3599327..3599824 | - | 498 | WP_107919743.1 | Saf-pilin pilus formation protein SafA | - |
| NL734_RS17815 () | 3599957..3600451 | - | 495 | WP_017465815.1 | hypothetical protein | - |
| NL734_RS17820 () | 3601237..3601938 | - | 702 | Protein_3484 | integrase core domain-containing protein | - |
| NL734_RS17825 () | 3601991..3602164 | + | 174 | WP_001531381.1 | hypothetical protein | - |
| NL734_RS17830 () | 3602229..3602696 | - | 468 | WP_001284951.1 | Imm42 family immunity protein | - |
| NL734_RS17835 () | 3602689..3602997 | - | 309 | WP_166427842.1 | hypothetical protein | - |
| NL734_RS17840 () | 3602988..3603125 | - | 138 | WP_231391191.1 | hypothetical protein | - |
| - | 3603210..3603620 | - | 411 | - | - | Antitoxin Detail |
| NL734_RS17845 () | 3603367..3603630 | + | 264 | WP_000994215.1 | hypothetical protein | Toxin Detail |
| NL734_RS17850 () | 3603677..3604111 | - | 435 | WP_000789494.1 | hypothetical protein | - |
| NL734_RS17855 () | 3604108..3605412 | - | 1305 | Protein_3491 | hypothetical protein | VF |
| NL734_RS17860 () | 3605549..3606013 | - | 465 | WP_223227916.1 | hypothetical protein | - |
| NL734_RS17865 () | 3606357..3608870 | - | 2514 | Protein_3493 | RHS domain-containing protein | - |
| NL734_RS17870 () | 3608861..3609133 | + | 273 | WP_072100733.1 | SymE family type I addiction module toxin | - |
| NL734_RS17875 () | 3609064..3609351 | - | 288 | WP_223227914.1 | RHS repeat-associated core domain-containing protein | - |
| NL734_RS17880 () | 3609503..3609922 | - | 420 | WP_031624782.1 | hypothetical protein | - |
| NL734_RS17885 () | 3610275..3610817 | - | 543 | Protein_3497 | hypothetical protein | VF |
| NL734_RS17890 () | 3610881..3611144 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NL734_RS17895 () | 3611138..3612292 | - | 1155 | Protein_3499 | hypothetical protein | VF |
| NL734_RS17900 () | 3612434..3613279 | - | 846 | WP_001084940.1 | hypothetical protein | - |
| NL734_RS17905 () | 3613289..3617377 | - | 4089 | WP_017465823.1 | RHS repeat-associated core domain-containing protein | - |
| NL734_RS17910 () | 3617396..3617842 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| NL734_RS17915 () | 3617866..3620055 | - | 2190 | WP_017465824.1 | hypothetical protein | VF |
| NL734_RS17920 () | 3620452..3620973 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| NL734_RS17925 () | 3620997..3621413 | - | 417 | WP_000759645.1 | DUF2195 family protein | - |
| NL734_RS17930 () | 3621410..3621504 | - | 95 | Protein_3506 | cytoplasmic protein | - |
| NL734_RS17935 () | 3621540..3622001 | - | 462 | WP_001684272.1 | hypothetical protein | - |
| NL734_RS17940 () | 3621986..3622456 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| NL734_RS17945 () | 3622499..3623266 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| NL734_RS17950 () | 3623266..3627135 | - | 3870 | WP_017465826.1 | hypothetical protein | VF |
| NL734_RS17955 () | 3627169..3627600 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| NL734_RS17960 () | 3627803..3628576 | - | 774 | WP_017465828.1 | Rap1a/Tai family immunity protein | - |
| NL734_RS17965 () | 3628581..3629885 | - | 1305 | WP_000132483.1 | hypothetical protein | VF |
| NL734_RS17970 () | 3629882..3631225 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| NL734_RS17975 () | 3631229..3631765 | - | 537 | WP_001007105.1 | hypothetical protein | VF |
| NL734_RS17980 () | 3631832..3632317 | - | 486 | WP_000119443.1 | hypothetical protein | VF |
| NL734_RS17985 () | 3632460..3632843 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NL734_RS17990 () | 3632828..3633313 | - | 486 | WP_017465829.1 | type VI secretion system amidase effector protein Tae4 | - |
| NL734_RS17995 () | 3633356..3633548 | - | 193 | Protein_3519 | type VI secretion system lipoprotein TssJ | - |
| NL734_RS18000 () | 3633616..3634101 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| NL734_RS18005 () | 3634355..3634687 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| NL734_RS18010 () | 3634814..3634924 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| NL734_RS18015 () | 3634987..3636495 | - | 1509 | WP_065680810.1 | type VI secretion system contractile sheath large subunit | - |
| NL734_RS18020 () | 3636519..3637061 | - | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| NL734_RS18025 () | 3637161..3639800 | - | 2640 | WP_017465831.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|