MGE detailed information
MGE type: Genomic_island MGE length: 9818 bp
Accession: NZ_CP100693 Location: 852994..862811 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Accession: NZ_CP100693 Location: 852994..862811 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL712_RS04085 (848059) | 848059..849157 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| NL712_RS04090 (849167) | 849167..850684 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NL712_RS04095 (850760) | 850760..851305 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NL712_RS04100 (851570) | 851570..852328 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| NL712_RS04110 (852574) | 852574..852771 | - | 198 | WP_023255488.1 | hypothetical protein | - |
| NL712_RS04115 (852994) | 852994..853221 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NL712_RS04120 (853221) | 853221..853619 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NL712_RS04125 (854425) | 854425..854961 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| NL712_RS04130 (855008) | 855008..855640 | + | 633 | WP_000835264.1 | YfdX family protein | - |
| NL712_RS04135 (856359) | 856359..856943 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| NL712_RS04140 (857063) | 857063..859552 | + | 2490 | WP_023256407.1 | Outer membrane usher protein PapC | VF |
| NL712_RS04145 (859593) | 859593..860336 | + | 744 | WP_023256406.1 | Chaperone protein PapD | VF |
| NL712_RS04150 (860333) | 860333..861409 | + | 1077 | WP_058805773.1 | fimbrial protein | - |
| NL712_RS04155 (861554) | 861554..862066 | + | 513 | WP_001660939.1 | CaiF/GrlA family transcriptional regulator | - |
| NL712_RS04160 (862053) | 862053..862811 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| NL712_RS04165 (863021) | 863021..863845 | - | 825 | WP_058805774.1 | nickel/cobalt efflux protein RcnA | - |
| NL712_RS04170 (863968) | 863968..864240 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NL712_RS04175 (864271) | 864271..865500 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| NL712_RS04180 (865642) | 865642..866097 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NL712_RS04185 (866201) | 866201..867064 | + | 864 | WP_001270769.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|