MGE detailed information
MGE type: Prophage MGE length: 43500 bp
Accession: NZ_CP100693 Location: 1962253..2005752 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Accession: NZ_CP100693 Location: 1962253..2005752 Organism: Salmonella enterica subsp. enterica serovar London strain R18.1595 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL712_RS09370 () | 1957309..1957761 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| NL712_RS09375 () | 1957791..1958531 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NL712_RS09380 () | 1958568..1959089 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NL712_RS09385 () | 1959091..1959690 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| NL712_RS09390 () | 1960317..1961213 | - | 897 | WP_001597478.1 | DUF4034 domain-containing protein | - |
| NL712_RS09395 () | 1961633..1962244 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NL712_RS09400 () | 1962253..1963263 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NL712_RS09405 () | 1963342..1964127 | - | 786 | WP_000571510.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NL712_RS09410 () | 1964124..1964879 | - | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| NL712_RS09415 () | 1964958..1965902 | + | 945 | WP_058805642.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NL712_RS09420 () | 1965918..1967237 | + | 1320 | WP_001184032.1 | murein DD-endopeptidase MepM | - |
| NL712_RS09425 () | 1967354..1968322 | + | 969 | WP_000448400.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NL712_RS09435 () | 1969713..1971155 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NL712_RS09440 () | 1971279..1972148 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NL712_RS09445 () | 1972490..1973965 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NL712_RS09450 () | 1974200..1976011 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NL712_RS09455 () | 1976049..1976690 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NL712_RS09460 () | 1976790..1977968 | - | 1179 | WP_058805752.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NL712_RS09465 () | 1978099..1978389 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NL712_RS09470 () | 1978457..1978810 | + | 354 | WP_001042123.1 | protein YebF | - |
| NL712_RS09475 () | 1978904..1979563 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NL712_RS09480 () | 1979776..1981827 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| NL712_RS09485 () | 1981864..1982562 | - | 699 | WP_023255939.1 | exodeoxyribonuclease X | - |
| NL712_RS09490 () | 1982586..1983242 | - | 657 | WP_023245437.1 | carbon-nitrogen hydrolase family protein | - |
| NL712_RS09495 () | 1983350..1983580 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NL712_RS09500 () | 1983718..1984092 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NL712_RS09505 () | 1984093..1984968 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| NL712_RS09510 () | 1984985..1985338 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1985440..1985583 | - | 144 | - | - | Antitoxin Detail |
| - | 1985479..1985581 | + | 103 | - | - | Toxin Detail |
| NL712_RS09515 () | 1985721..1986800 | - | 1080 | WP_058107134.1 | hypothetical protein ; Integrase | Integrase |
| NL712_RS09520 () | 1986833..1987984 | - | 1152 | Protein_1859 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| NL712_RS09525 () | 1987973..1988164 | + | 192 | Protein_1860 | glycoside hydrolase family 19 protein | - |
| NL712_RS09530 () | 1988218..1988751 | + | 534 | WP_023256014.1 | DUF2514 domain-containing protein | - |
| NL712_RS09535 () | 1989008..1989175 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NL712_RS09540 () | 1989240..1989428 | - | 189 | WP_001034748.1 | hypothetical protein | - |
| NL712_RS09545 () | 1989483..1989743 | + | 261 | Protein_1864 | DUF1441 family protein | - |
| NL712_RS09550 () | 1989745..1989960 | + | 216 | Protein_1865 | shikimate transporter | - |
| NL712_RS09555 () | 1989970..1990257 | + | 288 | Protein_1866 | macro domain-containing protein | - |
| NL712_RS09560 () | 1990270..1990781 | + | 512 | Protein_1867 | tail fiber assembly protein | - |
| NL712_RS09565 () | 1990878..1991078 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NL712_RS09570 () | 1991468..1991648 | - | 181 | Protein_1869 | IS3 family transposase | - |
| NL712_RS09575 () | 1991639..1991740 | + | 102 | Protein_1870 | arsenic transporter | - |
| NL712_RS09580 () | 1992362..1992594 | + | 233 | Protein_1871 | helix-turn-helix domain-containing protein | - |
| NL712_RS09585 () | 1992921..1993535 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NL712_RS09590 () | 1993545..1993703 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NL712_RS09595 () | 1993836..1994750 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| NL712_RS09600 () | 1996036..1996458 | - | 423 | Protein_1875 | hypothetical protein ; Integrase | Integrase |
| NL712_RS09605 () | 1996528..1997722 | + | 1195 | Protein_1876 | IS256 family transposase IS285 | Transposase |
| NL712_RS09610 () | 1997868..1998008 | - | 141 | WP_038390064.1 | hypothetical protein | - |
| NL712_RS09615 () | 1998174..1998443 | - | 270 | WP_077914367.1 | hypothetical protein | - |
| NL712_RS09620 () | 1998814..1999233 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| NL712_RS09625 () | 1999606..2000082 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NL712_RS09630 () | 2000412..2000807 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NL712_RS09635 () | 2001491..2002213 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NL712_RS09640 () | 2002498..2002662 | + | 165 | WP_001134856.1 | membrane protein | - |
| NL712_RS09645 () | 2002886..2003536 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NL712_RS09650 () | 2003555..2003746 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NL712_RS09655 () | 2003857..2004093 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NL712_RS09660 () | 2004211..2005650 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NL712_RS09665 () | 2005728..2008361 | - | 2634 | WP_001521100.1 | PqiB family protein | - |
| NL712_RS09670 () | 2008330..2009613 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| NL712_RS09675 () | 2009742..2010239 | + | 498 | WP_058805750.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|