MGE detailed information
MGE type: Conjugative plasmid MGE length: 88397 bp
Accession: NZ_CP100679 Location: 1..88397 Organism: Salmonella enterica subsp. enterica serovar Anatum strain R17.0809 Replicon: plasmid pR17.0809_88k
Accession: NZ_CP100679 Location: 1..88397 Organism: Salmonella enterica subsp. enterica serovar Anatum strain R17.0809 Replicon: plasmid pR17.0809_88k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL708_RS22905 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| NL708_RS22910 (2146) | 2146..2669 | - | 524 | Protein_1 | hypothetical protein | - |
| NL708_RS22915 (2725) | 2725..3327 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| NL708_RS22920 (3681) | 3681..5027 | + | 1347 | WP_001703911.1 | protein YagA | - |
| NL708_RS22925 (5566) | 5566..5868 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| NL708_RS22930 (5865) | 5865..6491 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| NL708_RS22935 (6679) | 6679..7950 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| NL708_RS22940 (7950) | 7950..8387 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NL708_RS22945 (8384) | 8384..8632 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| NL708_RS22950 (9050) | 9050..9952 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| NL708_RS22955 (9956) | 9956..10042 | + | 87 | Protein_10 | hypothetical protein | - |
| NL708_RS22960 (10047) | 10047..10382 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| NL708_RS22965 (10720) | 10720..11700 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| NL708_RS22970 (11703) | 11703..12125 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| NL708_RS22975 (12129) | 12129..12440 | + | 312 | WP_096035146.1 | hypothetical protein | - |
| NL708_RS22980 (12516) | 12516..13199 | + | 684 | WP_000086127.1 | DNA methylase | - |
| NL708_RS22985 (13200) | 13200..13421 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NL708_RS22990 (13351) | 13351..13869 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| NL708_RS22995 (13914) | 13914..14684 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| NL708_RS23000 (15102) | 15102..15527 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| NL708_RS23005 (15574) | 15574..15996 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| NL708_RS23010 (15993) | 15993..16184 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| NL708_RS23015 (16255) | 16255..16569 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| NL708_RS23020 (16953) | 16953..17480 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| NL708_RS23025 (17538) | 17538..17771 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| NL708_RS23030 (17830) | 17830..19788 | + | 1959 | WP_011264061.1 | ParB/RepB/Spo0J family partition protein | - |
| NL708_RS23035 (19841) | 19841..20275 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| NL708_RS23040 (20272) | 20272..20991 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| NL708_RS23045 (20988) | 20988..21584 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| NL708_RS23050 (22046) | 22046..22546 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| NL708_RS23055 (23275) | 23275..23709 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| NL708_RS23060 (23803) | 23803..24069 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| NL708_RS23065 (24246) | 24246..24635 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| NL708_RS23070 (24632) | 24632..25534 | + | 903 | WP_011264057.1 | ISNCY family transposase ISRor2 | VF |
| NL708_RS23075 (25596) | 25596..25802 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| NL708_RS23080 (25833) | 25833..26084 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NL708_RS23085 (26664) | 26664..27512 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| NL708_RS23090 (27599) | 27599..27934 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| NL708_RS23095 (28168) | 28168..28500 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| NL708_RS23100 (28511) | 28511..31210 | + | 2700 | WP_165885255.1 | hypothetical protein | Relaxase |
| NL708_RS23105 (31248) | 31248..33539 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| NL708_RS23110 (33532) | 33532..34602 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| NL708_RS23115 (34621) | 34621..35829 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (36009) | 36009..36066 | - | 58 | NuclAT_1 | - | - |
| - (36009) | 36009..36066 | - | 58 | NuclAT_1 | - | - |
| - (36009) | 36009..36066 | - | 58 | NuclAT_1 | - | - |
| - (36009) | 36009..36066 | - | 58 | NuclAT_1 | - | - |
| NL708_RS23120 (36136) | 36136..36918 | - | 783 | WP_023063753.1 | protein FinQ | - |
| NL708_RS23125 (37114) | 37114..37431 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| NL708_RS23130 (37428) | 37428..37961 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| NL708_RS23135 (38055) | 38055..39200 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| NL708_RS23145 (40860) | 40860..42122 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NL708_RS23150 (42275) | 42275..42649 | - | 375 | WP_223349261.1 | hypothetical protein | - |
| - (42858) | 42858..42918 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42858) | 42858..42918 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42858) | 42858..42918 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (42858) | 42858..42918 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| NL708_RS23155 (42970) | 42970..43122 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| NL708_RS23160 (43194) | 43194..43445 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| NL708_RS23165 (43745) | 43745..44041 | + | 297 | WP_011264046.1 | DinQ-like type I toxin DqlB | - |
| NL708_RS23170 (44106) | 44106..44282 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| NL708_RS23175 (44674) | 44674..44883 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| NL708_RS23180 (44955) | 44955..45617 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NL708_RS23185 (45688) | 45688..47856 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| NL708_RS23190 (47953) | 47953..48537 | - | 585 | WP_001746157.1 | IncI1-type conjugal transfer protein TraX | - |
| NL708_RS23195 (48566) | 48566..49768 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| NL708_RS23200 (49735) | 49735..50349 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| NL708_RS23205 (50349) | 50349..53393 | - | 3045 | WP_023518848.1 | IncI1-type conjugal transfer protein TraU | - |
| NL708_RS23210 (53483) | 53483..54283 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| NL708_RS23215 (54267) | 54267..54455 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| NL708_RS23220 (54519) | 54519..54923 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| NL708_RS23225 (54974) | 54974..55501 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| NL708_RS23230 (55501) | 55501..56205 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| NL708_RS23235 (56205) | 56205..57494 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| NL708_RS23240 (57497) | 57497..58480 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| NL708_RS23245 (58491) | 58491..59183 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| NL708_RS23250 (59180) | 59180..59527 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| NL708_RS23255 (59545) | 59545..63312 | - | 3768 | WP_023518849.1 | DUF5710 domain-containing protein | - |
| NL708_RS23260 (63402) | 63402..63953 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| NL708_RS23265 (63968) | 63968..64258 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| NL708_RS23270 (64255) | 64255..65403 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| NL708_RS23275 (65400) | 65400..66218 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| NL708_RS23280 (66215) | 66215..66673 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| NL708_RS23285 (67068) | 67068..67652 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| NL708_RS23290 (67712) | 67712..68914 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| NL708_RS23295 (69000) | 69000..69824 | - | 825 | WP_023518851.1 | conjugal transfer protein TraE | - |
| NL708_RS23300 (69975) | 69975..71129 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| NL708_RS23305 (72763) | 72763..74199 | - | 1437 | WP_015058206.1 | hypothetical protein | VF |
| NL708_RS23310 (74187) | 74187..74843 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| NL708_RS23315 (74828) | 74828..75388 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| NL708_RS23320 (75398) | 75398..76012 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| NL708_RS23325 (76029) | 76029..77114 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| NL708_RS23330 (77127) | 77127..78680 | - | 1554 | WP_254520830.1 | hypothetical protein | VF |
| NL708_RS23335 (78691) | 78691..79143 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| NL708_RS23340 (79130) | 79130..80425 | - | 1296 | WP_023518855.1 | type 4b pilus protein PilO2 | - |
| NL708_RS23345 (80418) | 80418..82100 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| NL708_RS23350 (82114) | 82114..82551 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| NL708_RS23355 (82551) | 82551..83618 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| NL708_RS23360 (84665) | 84665..84919 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| NL708_RS23365 (85091) | 85091..85774 | - | 684 | WP_023518856.1 | conjugal transfer protein TraC | - |
| NL708_RS23370 (86028) | 86028..86561 | - | 534 | WP_001712498.1 | transcription termination/antitermination NusG family protein | - |
| NL708_RS23375 (87003) | 87003..87290 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| NL708_RS23380 (87328) | 87328..87486 | - | 159 | Protein_95 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|