MGE detailed information
MGE type: Prophage MGE length: 28382 bp
Accession: NZ_CP100553 Location: 1150722..1179103 Organism: Pseudomonas hydrolytica strain KHPS2 Replicon: chromosome
Accession: NZ_CP100553 Location: 1150722..1179103 Organism: Pseudomonas hydrolytica strain KHPS2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY38_RS05235 (NLY38_05235) | 1145981..1147462 | - | 1482 | WP_003243113.1 | glycosyltransferase family 2 protein | - |
| NLY38_RS05240 (NLY38_05240) | 1147511..1148821 | - | 1311 | WP_003243115.1 | GDP-mannose 6-dehydrogenase | - |
| NLY38_RS05245 (NLY38_05245) | 1149519..1150298 | - | 780 | WP_003243117.1 | peroxide stress protein YaaA | - |
| NLY38_RS05250 (NLY38_05250) | 1150722..1152113 | + | 1392 | WP_003243119.1 | PhoH family protein | - |
| NLY38_RS05255 (NLY38_05255) | 1152275..1152751 | + | 477 | WP_195882883.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| NLY38_RS05260 (NLY38_05260) | 1152748..1152990 | + | 243 | WP_003243123.1 | MoaD/ThiS family protein | - |
| NLY38_RS05265 (NLY38_05265) | 1153143..1153592 | + | 450 | WP_195882882.1 | molybdopterin synthase catalytic subunit MoaE | - |
| NLY38_RS05270 (NLY38_05270) | 1153742..1153906 | - | 165 | WP_003243127.1 | hypothetical protein | - |
| NLY38_RS05275 (NLY38_05275) | 1154080..1155996 | + | 1917 | WP_195882881.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| NLY38_RS05280 (NLY38_05280) | 1156287..1157198 | + | 912 | WP_195882880.1 | DMT family transporter | - |
| NLY38_RS05285 (NLY38_05285) | 1157300..1157878 | + | 579 | WP_003244654.1 | hypothetical protein | - |
| NLY38_RS05290 (NLY38_05290) | 1157887..1158333 | - | 447 | WP_129481805.1 | hypothetical protein | - |
| NLY38_RS05295 (NLY38_05295) | 1158360..1158524 | - | 165 | WP_096825672.1 | hypothetical protein | - |
| NLY38_RS05300 (NLY38_05300) | 1158663..1159016 | + | 354 | WP_195882879.1 | excalibur calcium-binding domain-containing protein | - |
| NLY38_RS05305 (NLY38_05305) | 1159013..1159240 | - | 228 | WP_003244658.1 | hypothetical protein | - |
| NLY38_RS05315 (NLY38_05315) | 1159595..1160584 | - | 990 | WP_254348332.1 | IS91 family transposase ISTha3 | Transposase |
| NLY38_RS05320 (NLY38_05320) | 1160581..1161858 | - | 1278 | WP_254348333.1 | hypothetical protein | - |
| NLY38_RS05325 (NLY38_05325) | 1162014..1163204 | - | 1191 | WP_254348334.1 | zonular occludens toxin domain-containing protein | - |
| NLY38_RS05330 (NLY38_05330) | 1163204..1163521 | - | 318 | WP_012018525.1 | DUF2523 domain-containing protein | - |
| NLY38_RS05335 (NLY38_05335) | 1163523..1164869 | - | 1347 | WP_254348335.1 | virulence factor TspB C-terminal domain-related protein | - |
| NLY38_RS05340 (NLY38_05340) | 1165005..1165211 | - | 207 | WP_041772873.1 | major capsid protein | - |
| NLY38_RS05345 (NLY38_05345) | 1165223..1165426 | - | 204 | WP_012018527.1 | hypothetical protein | - |
| NLY38_RS05350 (NLY38_05350) | 1165436..1165615 | - | 180 | WP_012018528.1 | hypothetical protein | - |
| NLY38_RS05355 (NLY38_05355) | 1165631..1166002 | - | 372 | WP_254348336.1 | hypothetical protein | - |
| NLY38_RS05360 (NLY38_05360) | 1166176..1166448 | - | 273 | WP_254348337.1 | hypothetical protein | - |
| NLY38_RS05365 (NLY38_05365) | 1166445..1167086 | - | 642 | WP_254348339.1 | DNA cytosine methyltransferase | - |
| NLY38_RS05370 (NLY38_05370) | 1167091..1167390 | - | 300 | WP_254348341.1 | DUF5447 family protein | - |
| NLY38_RS05375 (NLY38_05375) | 1167720..1168001 | - | 282 | WP_254348343.1 | DNA-binding protein | - |
| NLY38_RS05380 (NLY38_05380) | 1168463..1168756 | + | 294 | WP_254348345.1 | hypothetical protein | - |
| NLY38_RS05385 (NLY38_05385) | 1169012..1169431 | - | 420 | WP_129481803.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NLY38_RS05390 (NLY38_05390) | 1169428..1169673 | - | 246 | WP_011921115.1 | Arc family DNA-binding protein | Antitoxin Detail |
| NLY38_RS05395 (NLY38_05395) | 1169726..1169977 | - | 252 | Protein_1064 | tyrosine-type recombinase/integrase | - |
| NLY38_RS05400 (NLY38_05400) | 1170399..1171292 | + | 894 | WP_254348347.1 | hypothetical protein | - |
| NLY38_RS05405 (NLY38_05405) | 1171413..1172519 | + | 1107 | WP_254348349.1 | hypothetical protein | - |
| NLY38_RS05410 (NLY38_05410) | 1172757..1173422 | - | 666 | WP_195882877.1 | MBL fold metallo-hydrolase | - |
| NLY38_RS05415 (NLY38_05415) | 1173645..1174745 | - | 1101 | WP_129481795.1 | redox-regulated ATPase YchF | - |
| NLY38_RS05420 (NLY38_05420) | 1174771..1175361 | - | 591 | WP_195882876.1 | aminoacyl-tRNA hydrolase | - |
| NLY38_RS05425 (NLY38_05425) | 1175425..1176030 | - | 606 | WP_003244665.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| NLY38_RS05430 (NLY38_05430) | 1176136..1177077 | - | 942 | WP_003244667.1 | ribose-phosphate pyrophosphokinase | - |
| NLY38_RS05445 (NLY38_05445) | 1177355..1178230 | - | 876 | WP_195882875.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| NLY38_RS05450 (NLY38_05450) | 1178489..1179103 | - | 615 | WP_177491016.1 | lipoprotein insertase outer membrane protein LolB | - |
| NLY38_RS05455 (NLY38_05455) | 1179103..1180830 | - | 1728 | WP_195882874.1 | tetratricopeptide repeat protein | - |
| NLY38_RS05460 (NLY38_05460) | 1181040..1182320 | + | 1281 | WP_011921123.1 | glutamyl-tRNA reductase | - |
| NLY38_RS05465 (NLY38_05465) | 1182317..1183399 | + | 1083 | WP_011921124.1 | peptide chain release factor 1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|