MGE detailed information
MGE type: IScluster/Tn MGE length: 14182 bp
Accession: NZ_CP100531 Location: 39256..53437 Organism: Escherichia coli strain LH10-b-1 Replicon: plasmid pLH10-b-1-A
Accession: NZ_CP100531 Location: 39256..53437 Organism: Escherichia coli strain LH10-b-1 Replicon: plasmid pLH10-b-1-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ08_RS24295 (NLZ08_24295) | 34328..35605 | - | 1278 | WP_001099190.1 | MFS transporter | - |
| NLZ08_RS24300 (NLZ08_24300) | 35660..37786 | - | 2127 | WP_000433621.1 | alpha-galactosidase | - |
| NLZ08_RS24305 (NLZ08_24305) | 37880..38890 | - | 1011 | WP_254547639.1 | substrate-binding domain-containing protein | - |
| NLZ08_RS24310 (NLZ08_24310) | 39316..40550 | + | 1235 | WP_089620070.1 | IS3 family transposase ISEc48 | Transposase |
| NLZ08_RS24315 (NLZ08_24315) | 40566..40823 | - | 258 | Protein_43 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| NLZ08_RS24320 (NLZ08_24320) | 40990..41631 | + | 642 | WP_052897785.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NLZ08_RS24325 (NLZ08_24325) | 41678..42160 | + | 483 | Protein_45 | IS91 family transposase ISSbo1 | Transposase |
| NLZ08_RS24330 (NLZ08_24330) | 42586..42785 | - | 200 | Protein_46 | hypothetical protein | - |
| NLZ08_RS24335 (NLZ08_24335) | 42891..43166 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NLZ08_RS24340 (NLZ08_24340) | 43166..43450 | - | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NLZ08_RS24345 (NLZ08_24345) | 43840..44850 | + | 1011 | WP_096984501.1 | IS110 family transposase IS1663 | Transposase |
| NLZ08_RS24350 (NLZ08_24350) | 45428..46018 | + | 591 | WP_087599075.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NLZ08_RS24355 (NLZ08_24355) | 46065..46223 | + | 159 | Protein_51 | integrase core domain-containing protein | - |
| NLZ08_RS24360 (NLZ08_24360) | 46373..47371 | + | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| NLZ08_RS24365 (NLZ08_24365) | 47371..48408 | + | 1038 | WP_000110580.1 | Vitamin B12 import system permease protein BtuC | VF |
| NLZ08_RS24370 (NLZ08_24370) | 48408..49169 | + | 762 | WP_000020503.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NLZ08_RS24375 (NLZ08_24375) | 49226..50413 | + | 1188 | WP_160348040.1 | MFS transporter | - |
| NLZ08_RS24380 (NLZ08_24380) | 50491..50658 | - | 168 | Protein_56 | bacteriocin immunity protein | - |
| NLZ08_RS24385 (NLZ08_24385) | 50722..51419 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| NLZ08_RS24390 (NLZ08_24390) | 51435..51629 | + | 195 | Protein_58 | helix-turn-helix domain-containing protein | - |
| NLZ08_RS24395 (NLZ08_24395) | 51889..52752 | - | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NLZ08_RS24405 (NLZ08_24405) | 53862..54251 | - | 390 | WP_032354229.1 | cytochrome b562 | - |
| NLZ08_RS24410 (NLZ08_24410) | 54685..55575 | - | 891 | WP_000470711.1 | LysR substrate-binding domain-containing protein | - |
| NLZ08_RS24415 (NLZ08_24415) | 55653..56876 | - | 1224 | WP_024188138.1 | cytosine permease | - |
| NLZ08_RS24420 (NLZ08_24420) | 56899..57288 | - | 390 | WP_001696803.1 | hypothetical protein | - |
| NLZ08_RS24425 (NLZ08_24425) | 57305..58261 | - | 957 | WP_032353537.1 | carbamate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|