MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80637 bp
Accession: NZ_CP100527 Location: 1..80637 Organism: Escherichia coli strain LH13-b Replicon: plasmid pLH13-b-B
Accession: NZ_CP100527 Location: 1..80637 Organism: Escherichia coli strain LH13-b Replicon: plasmid pLH13-b-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ09_RS23325 (NLZ09_23325) | 22..576 | + | 555 | WP_254541917.1 | conjugal transfer protein TraF | - |
| NLZ09_RS23330 (NLZ09_23330) | 686..938 | + | 253 | Protein_1 | conjugal transfer protein TraH | - |
| NLZ09_RS23335 (NLZ09_23335) | 948..1853 | + | 906 | Protein_2 | IS3 family transposase ISEc31 | Transposase |
| NLZ09_RS23340 (NLZ09_23340) | 1919..3468 | + | 1550 | WP_115355952.1 | IS3 family transposase ISKpn38 | Transposase |
| NLZ09_RS23345 (NLZ09_23345) | 3530..3775 | + | 246 | Protein_4 | IS91 family transposase | - |
| NLZ09_RS23350 (NLZ09_23350) | 4360..7875 | + | 3516 | WP_094321081.1 | hypothetical protein | VF |
| NLZ09_RS23355 (NLZ09_23355) | 8050..8255 | - | 206 | Protein_6 | hypothetical protein | - |
| NLZ09_RS23360 (NLZ09_23360) | 8254..8367 | + | 114 | Protein_7 | alkaline phosphatase | - |
| NLZ09_RS23365 (NLZ09_23365) | 8735..9022 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NLZ09_RS23370 (NLZ09_23370) | 9019..9270 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NLZ09_RS23375 (NLZ09_23375) | 9883..11700 | + | 1818 | Protein_10 | helicase | - |
| NLZ09_RS23380 (NLZ09_23380) | 11734..12174 | + | 441 | WP_023352064.1 | hypothetical protein | - |
| NLZ09_RS23385 (NLZ09_23385) | 12171..12419 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| NLZ09_RS23390 (NLZ09_23390) | 12458..13179 | - | 722 | Protein_13 | helix-turn-helix domain-containing protein | - |
| NLZ09_RS23395 (NLZ09_23395) | 13414..14103 | + | 690 | WP_000452096.1 | EAL domain-containing protein | - |
| NLZ09_RS23400 (NLZ09_23400) | 14157..14912 | - | 756 | WP_072649769.1 | hypothetical protein | - |
| NLZ09_RS23405 (NLZ09_23405) | 14991..15323 | - | 333 | Protein_16 | Ref family protein | - |
| NLZ09_RS23410 (NLZ09_23410) | 15596..16372 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| NLZ09_RS23415 (NLZ09_23415) | 16388..17377 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| NLZ09_RS23420 (NLZ09_23420) | 17635..18332 | + | 698 | WP_237161090.1 | IS1-like element IS1A family transposase | - |
| NLZ09_RS23425 (NLZ09_23425) | 18352..18564 | + | 213 | WP_226226737.1 | ester cyclase | - |
| NLZ09_RS23430 (NLZ09_23430) | 18671..19310 | - | 640 | Protein_21 | recombinase family protein | - |
| NLZ09_RS23435 (NLZ09_23435) | 19659..19970 | - | 312 | WP_016246567.1 | hypothetical protein | - |
| NLZ09_RS23440 (NLZ09_23440) | 20021..21052 | - | 1032 | WP_000067534.1 | site-specific integrase | - |
| NLZ09_RS23445 (NLZ09_23445) | 21060..21281 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| NLZ09_RS23450 (NLZ09_23450) | 21918..22898 | - | 981 | WP_021559276.1 | IS5 family transposase ISKpn26 | Transposase |
| NLZ09_RS23455 (NLZ09_23455) | 23353..23850 | - | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| NLZ09_RS23460 (NLZ09_23460) | 23880..24476 | - | 597 | WP_032203482.1 | molecular chaperone | - |
| NLZ09_RS23465 (NLZ09_23465) | 24531..25307 | - | 777 | WP_254541918.1 | dimethyl sulfoxide reductase anchor subunit | - |
| NLZ09_RS23470 (NLZ09_23470) | 25300..25926 | - | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| NLZ09_RS23475 (NLZ09_23475) | 25940..28366 | - | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| NLZ09_RS23485 (NLZ09_23485) | 29532..29741 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| NLZ09_RS23490 (NLZ09_23490) | 29852..30703 | + | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| NLZ09_RS23495 (NLZ09_23495) | 30736..31068 | - | 333 | WP_224205061.1 | phage antirepressor KilAC domain-containing protein | - |
| NLZ09_RS23500 (NLZ09_23500) | 31189..31539 | - | 351 | Protein_35 | ORF6N domain-containing protein | - |
| NLZ09_RS23505 (NLZ09_23505) | 31848..32069 | - | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| NLZ09_RS23510 (NLZ09_23510) | 32088..32207 | - | 120 | WP_071527722.1 | ash family protein | - |
| NLZ09_RS23515 (NLZ09_23515) | 32376..33344 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| NLZ09_RS23520 (NLZ09_23520) | 33401..33862 | - | 462 | Protein_39 | hypothetical protein | - |
| NLZ09_RS23525 (NLZ09_23525) | 34397..35094 | + | 698 | WP_237161090.1 | IS1-like element IS1A family transposase | - |
| NLZ09_RS23530 (NLZ09_23530) | 35029..35301 | - | 273 | WP_050489281.1 | PerC family transcriptional regulator | - |
| NLZ09_RS23535 (NLZ09_23535) | 35391..36125 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| NLZ09_RS23540 (NLZ09_23540) | 36280..36420 | - | 141 | Protein_43 | L-threonine dehydrogenase | - |
| NLZ09_RS23550 (NLZ09_23550) | 37748..38331 | - | 584 | Protein_45 | IS1 family transposase | - |
| NLZ09_RS23555 (NLZ09_23555) | 38531..42004 | - | 3474 | WP_254541919.1 | cellulose synthase complex outer membrane protein BcsC | - |
| NLZ09_RS23560 (NLZ09_23560) | 41986..42138 | - | 153 | Protein_47 | endo-1,4-D-glucanase | - |
| NLZ09_RS23565 (NLZ09_23565) | 42471..42857 | - | 387 | Protein_48 | IS200/IS605 family transposase | - |
| NLZ09_RS23570 (NLZ09_23570) | 43044..44390 | - | 1347 | WP_254541915.1 | group II intron reverse transcriptase/maturase | - |
| NLZ09_RS23575 (NLZ09_23575) | 45134..47284 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| NLZ09_RS23580 (NLZ09_23580) | 47348..49453 | - | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| NLZ09_RS23585 (NLZ09_23585) | 49534..50231 | + | 698 | WP_232565518.1 | IS1-like element IS1B family transposase | - |
| NLZ09_RS23590 (NLZ09_23590) | 50278..51624 | - | 1347 | WP_158666848.1 | GGDEF domain-containing protein | - |
| NLZ09_RS23595 (NLZ09_23595) | 51614..53947 | - | 2334 | WP_032203688.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| NLZ09_RS23605 (NLZ09_23605) | 55763..56647 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| NLZ09_RS23610 (NLZ09_23610) | 56940..57749 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| NLZ09_RS23615 (NLZ09_23615) | 57918..59114 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| NLZ09_RS23620 (NLZ09_23620) | 59131..60132 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| NLZ09_RS23625 (NLZ09_23625) | 60358..62064 | + | 1707 | WP_000067707.1 | hypothetical protein | - |
| NLZ09_RS23630 (NLZ09_23630) | 62124..63713 | + | 1590 | WP_032203566.1 | hypothetical protein | - |
| NLZ09_RS23635 (NLZ09_23635) | 63723..64538 | + | 816 | WP_001514461.1 | hypothetical protein | - |
| NLZ09_RS23640 (NLZ09_23640) | 64691..65155 | + | 465 | WP_224504851.1 | hypothetical protein | - |
| NLZ09_RS23645 (NLZ09_23645) | 65167..65676 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| NLZ09_RS23650 (NLZ09_23650) | 65836..66948 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| NLZ09_RS23655 (NLZ09_23655) | 67142..67297 | - | 156 | WP_032203563.1 | Hok/Gef family protein | - |
| NLZ09_RS23660 (NLZ09_23660) | 67695..68913 | + | 1219 | Protein_67 | IS3 family transposase | - |
| NLZ09_RS23665 (NLZ09_23665) | 68934..69950 | + | 1017 | Protein_68 | IS256 family transposase IS1414 | Transposase |
| NLZ09_RS23670 (NLZ09_23670) | 69998..72172 | - | 2175 | WP_032176963.1 | HTH-type transcriptional repressor PurR | VF |
| NLZ09_RS23675 (NLZ09_23675) | 72506..73330 | + | 825 | WP_032203560.1 | MBL fold metallo-hydrolase | - |
| NLZ09_RS23680 (NLZ09_23680) | 73343..74578 | + | 1236 | WP_032177316.1 | MFS transporter | - |
| NLZ09_RS23685 (NLZ09_23685) | 74611..75324 | + | 714 | WP_032177315.1 | Protein SapB | VF |
| NLZ09_RS23690 (NLZ09_23690) | 75513..75914 | - | 402 | WP_077875119.1 | VENN motif pre-toxin domain-containing protein | - |
| NLZ09_RS23695 (NLZ09_23695) | 76015..76480 | - | 466 | Protein_74 | IS3 family transposase | - |
| NLZ09_RS23700 (NLZ09_23700) | 76561..78069 | - | 1509 | WP_038999377.1 | group II intron reverse transcriptase/maturase | - |
| NLZ09_RS23705 (NLZ09_23705) | 78742..79164 | - | 423 | Protein_76 | IS3 family transposase | - |
| NLZ09_RS23710 (NLZ09_23710) | 79147..79872 | + | 726 | Protein_77 | IS3 family transposase ISEhe3 | Transposase |
| NLZ09_RS23715 (NLZ09_23715) | 79926..80623 | + | 698 | WP_118014601.1 | IS1 family transposase IS1S | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|