MGE detailed information
MGE type: Conjugative plasmid MGE length: 121387 bp
Accession: NZ_CP100526 Location: 1..121387 Organism: Escherichia coli strain LH13-b Replicon: plasmid pLH13-b-A
Accession: NZ_CP100526 Location: 1..121387 Organism: Escherichia coli strain LH13-b Replicon: plasmid pLH13-b-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ09_RS22620 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NLZ09_RS22625 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| NLZ09_RS22630 (2124) | 2124..2303 | - | 180 | WP_254541913.1 | serine/threonine protein kinase | - |
| NLZ09_RS22635 (2677) | 2677..3579 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| NLZ09_RS22640 (3648) | 3648..4757 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| NLZ09_RS22645 (5190) | 5190..6143 | - | 954 | WP_000280980.1 | hypothetical protein | VF |
| NLZ09_RS22650 (7440) | 7440..7619 | - | 180 | Protein_6 | transposase | - |
| NLZ09_RS22655 (7758) | 7758..8971 | + | 1214 | WP_162843585.1 | IS3 family transposase IS629 | Transposase |
| NLZ09_RS22660 (9119) | 9119..9444 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| NLZ09_RS22665 (9490) | 9490..9830 | + | 341 | Protein_9 | IS3 family transposase | - |
| NLZ09_RS22670 (10425) | 10425..11612 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| NLZ09_RS22675 (11609) | 11609..12922 | + | 1314 | Protein_11 | Macrolide export ATP-binding/permease protein MacB | VF |
| NLZ09_RS22680 (12977) | 12977..14190 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| NLZ09_RS22685 (14233) | 14233..14862 | + | 630 | Protein_13 | FtsX-like permease family protein | - |
| NLZ09_RS22690 (14866) | 14866..16236 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| NLZ09_RS22695 (16710) | 16710..16904 | + | 195 | Protein_15 | IS200-IS605 family transposase IS200C | Transposase |
| NLZ09_RS22700 (17033) | 17033..17974 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| NLZ09_RS22705 (18211) | 18211..18908 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| NLZ09_RS22710 (18986) | 18986..20375 | - | 1390 | Protein_18 | ISNCY family transposase ISKpn21 | Transposase |
| NLZ09_RS22715 (20685) | 20685..20834 | - | 150 | Protein_19 | IS3 family transposase IS2 | Transposase |
| NLZ09_RS22720 (21012) | 21012..22205 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| NLZ09_RS22725 (23428) | 23428..24664 | - | 1237 | Protein_21 | IS3 family transposase IS2 | Transposase |
| NLZ09_RS22730 (25291) | 25291..25584 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| NLZ09_RS22735 (25642) | 25642..25841 | - | 200 | Protein_23 | lysis protein | - |
| NLZ09_RS22740 (26395) | 26395..27425 | + | 1031 | Protein_24 | integrase core domain-containing protein | - |
| NLZ09_RS22745 (28736) | 28736..29851 | + | 1116 | WP_001318220.1 | hypothetical protein | VF |
| NLZ09_RS22750 (29991) | 29991..33650 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| NLZ09_RS22755 (33754) | 33754..34983 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| NLZ09_RS22760 (35068) | 35068..36024 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| NLZ09_RS22765 (36069) | 36069..38246 | - | 2178 | WP_001222186.1 | Vitamin B12 transporter BtuB | VF |
| NLZ09_RS22770 (38516) | 38516..39213 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| NLZ09_RS22775 (39230) | 39230..39385 | - | 156 | Protein_31 | colicin V | - |
| NLZ09_RS22780 (39363) | 39363..39599 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| NLZ09_RS22785 (40141) | 40141..40344 | - | 204 | Protein_33 | hypothetical protein | - |
| NLZ09_RS22790 (40517) | 40517..40684 | + | 168 | Protein_34 | colicin-B | - |
| NLZ09_RS22795 (40702) | 40702..41229 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| NLZ09_RS22800 (41473) | 41473..42288 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| NLZ09_RS22805 (42338) | 42338..42691 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NLZ09_RS22810 (42869) | 42869..43660 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| NLZ09_RS22815 (43657) | 43657..44346 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| NLZ09_RS22820 (44390) | 44390..44740 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| NLZ09_RS22825 (45273) | 45273..46199 | + | 927 | WP_080077783.1 | hypothetical protein | - |
| NLZ09_RS22830 (46249) | 46249..46503 | + | 255 | WP_059291112.1 | hypothetical protein | - |
| NLZ09_RS22835 (47001) | 47001..47345 | + | 345 | WP_087601730.1 | abortive infection protein | - |
| NLZ09_RS22840 (47519) | 47519..48520 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| NLZ09_RS22845 (48871) | 48871..49128 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| NLZ09_RS22850 (49128) | 49128..49718 | + | 591 | WP_000194553.1 | hypothetical protein | - |
| NLZ09_RS22855 (49738) | 49738..50085 | - | 348 | WP_024148462.1 | DUF6404 family protein | - |
| NLZ09_RS22860 (50170) | 50170..50448 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| NLZ09_RS22865 (50448) | 50448..50717 | - | 270 | WP_042021804.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| NLZ09_RS22870 (50772) | 50772..50930 | - | 159 | WP_000829588.1 | hypothetical protein | - |
| NLZ09_RS22875 (51632) | 51632..52489 | - | 858 | WP_000130644.1 | incFII family plasmid replication initiator RepA | - |
| NLZ09_RS22880 (52482) | 52482..52556 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| NLZ09_RS22885 (52794) | 52794..53048 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| NLZ09_RS22890 (53288) | 53288..53878 | - | 591 | WP_001629336.1 | DUF2726 domain-containing protein | - |
| NLZ09_RS22895 (53917) | 53917..54126 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| NLZ09_RS22900 (54172) | 54172..54633 | - | 462 | WP_001825161.1 | thermonuclease family protein | - |
| NLZ09_RS22905 (54879) | 54879..55091 | - | 213 | WP_001311693.1 | hypothetical protein | - |
| NLZ09_RS22910 (55226) | 55226..55786 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| NLZ09_RS22915 (55841) | 55841..56587 | - | 747 | WP_100692554.1 | conjugal transfer pilus acetylase TraX | - |
| NLZ09_RS22920 (56607) | 56607..61877 | - | 5271 | WP_254541914.1 | Multifunctional conjugation protein TraI | Relaxase |
| NLZ09_RS22925 (61877) | 61877..64075 | - | 2199 | WP_011402783.1 | type IV conjugative transfer system coupling protein TraD | - |
| NLZ09_RS22930 (64148) | 64148..65719 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| NLZ09_RS22935 (65739) | 65739..66086 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NLZ09_RS22940 (66086) | 66086..66763 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| NLZ09_RS22945 (67035) | 67035..67745 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| NLZ09_RS22950 (67798) | 67798..68301 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| NLZ09_RS22955 (68316) | 68316..71138 | - | 2823 | WP_011251382.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NLZ09_RS22960 (71135) | 71135..72508 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| NLZ09_RS22965 (72508) | 72508..72870 | - | 363 | WP_011251381.1 | P-type conjugative transfer protein TrbJ | - |
| NLZ09_RS22970 (72800) | 72800..73345 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NLZ09_RS22975 (73332) | 73332..73616 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NLZ09_RS22980 (73735) | 73735..74082 | - | 348 | WP_011251380.1 | conjugal transfer protein TrbA | - |
| NLZ09_RS22985 (74098) | 74098..74841 | - | 744 | WP_001030390.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NLZ09_RS22990 (74834) | 74834..75091 | - | 258 | WP_000864328.1 | conjugal transfer protein TrbE | - |
| NLZ09_RS22995 (75118) | 75118..76926 | - | 1809 | WP_011251379.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NLZ09_RS23000 (76923) | 76923..77561 | - | 639 | WP_254541912.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NLZ09_RS23005 (77570) | 77570..78562 | - | 993 | WP_001712363.1 | conjugal transfer pilus assembly protein TraU | - |
| NLZ09_RS23010 (78559) | 78559..79191 | - | 633 | WP_011251377.1 | type-F conjugative transfer system protein TraW | - |
| NLZ09_RS23015 (79188) | 79188..79574 | - | 387 | WP_011251376.1 | type-F conjugative transfer system protein TrbI | - |
| NLZ09_RS23020 (79571) | 79571..82201 | - | 2631 | WP_011251375.1 | type IV secretion system protein TraC | - |
| NLZ09_RS23025 (82327) | 82327..82689 | - | 363 | WP_000836686.1 | hypothetical protein | - |
| NLZ09_RS23030 (82717) | 82717..82932 | - | 216 | WP_000556749.1 | hypothetical protein | - |
| NLZ09_RS23035 (83012) | 83012..83485 | - | 474 | WP_000549595.1 | hypothetical protein | - |
| NLZ09_RS23040 (83478) | 83478..83651 | - | 174 | WP_024262213.1 | conjugal transfer protein TraR | - |
| NLZ09_RS23045 (83769) | 83769..84284 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NLZ09_RS23050 (84281) | 84281..84532 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| NLZ09_RS23055 (84529) | 84529..84846 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| NLZ09_RS23060 (84843) | 84843..85415 | - | 573 | WP_000002794.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NLZ09_RS23065 (85405) | 85405..86832 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NLZ09_RS23070 (86832) | 86832..87560 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NLZ09_RS23075 (87547) | 87547..88113 | - | 567 | WP_011251373.1 | type IV conjugative transfer system protein TraE | - |
| NLZ09_RS23080 (88135) | 88135..88446 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NLZ09_RS23085 (88461) | 88461..88820 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| NLZ09_RS23090 (88854) | 88854..89081 | - | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| NLZ09_RS23095 (89175) | 89175..89861 | - | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| NLZ09_RS23100 (90052) | 90052..90435 | - | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NLZ09_RS23105 (90712) | 90712..91359 | + | 648 | WP_000615259.1 | hypothetical protein | VF |
| NLZ09_RS23110 (91656) | 91656..92477 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NLZ09_RS23115 (92599) | 92599..92886 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NLZ09_RS23120 (92911) | 92911..93117 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NLZ09_RS23125 (93187) | 93187..93360 | + | 174 | Protein_101 | hypothetical protein | - |
| NLZ09_RS23130 (93358) | 93358..93588 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| NLZ09_RS23135 (93807) | 93807..93932 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NLZ09_RS23140 (93874) | 93874..94023 | - | 150 | Protein_104 | plasmid maintenance protein Mok | - |
| - (94011) | 94011..94076 | - | 66 | NuclAT_1 | - | - |
| - (94009) | 94009..94233 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (94009) | 94009..94233 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (94009) | 94009..94233 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (94009) | 94009..94233 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (94009) | 94009..94233 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| NLZ09_RS23145 (94045) | 94045..94233 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| NLZ09_RS23150 (94202) | 94202..94964 | - | 763 | Protein_106 | plasmid SOS inhibition protein A | - |
| NLZ09_RS23155 (94961) | 94961..95395 | - | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| NLZ09_RS23160 (95450) | 95450..97408 | - | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| NLZ09_RS23165 (97473) | 97473..97706 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| NLZ09_RS23170 (97768) | 97768..98307 | - | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| NLZ09_RS23175 (98333) | 98333..98539 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| NLZ09_RS23180 (98780) | 98780..99007 | - | 228 | WP_071594011.1 | hypothetical protein | - |
| NLZ09_RS23185 (99159) | 99159..99722 | - | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| NLZ09_RS23190 (99770) | 99770..101131 | - | 1362 | WP_075660697.1 | DUF3560 domain-containing protein | - |
| NLZ09_RS23195 (101183) | 101183..101413 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NLZ09_RS23200 (102451) | 102451..102642 | - | 192 | WP_001027519.1 | hypothetical protein | - |
| NLZ09_RS23205 (102639) | 102639..103061 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NLZ09_RS23210 (103108) | 103108..103533 | - | 426 | WP_024214837.1 | antirestriction protein | - |
| NLZ09_RS23215 (103935) | 103935..104906 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| NLZ09_RS23225 (105707) | 105707..106042 | - | 336 | WP_000343070.1 | hypothetical protein | - |
| NLZ09_RS23230 (106111) | 106111..106449 | - | 339 | WP_001523531.1 | hypothetical protein | - |
| NLZ09_RS23235 (106455) | 106455..106624 | - | 170 | Protein_123 | hypothetical protein | - |
| NLZ09_RS23240 (107218) | 107218..108189 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NLZ09_RS23245 (108189) | 108189..109355 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| NLZ09_RS23255 (110507) | 110507..112009 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| NLZ09_RS23260 (112627) | 112627..113052 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| NLZ09_RS23265 (113194) | 113194..113673 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| NLZ09_RS23270 (114113) | 114113..114364 | + | 252 | WP_000163248.1 | hypothetical protein | - |
| NLZ09_RS23275 (114337) | 114337..114468 | - | 132 | Protein_131 | phosphopyruvate hydratase | - |
| NLZ09_RS23280 (114466) | 114466..114723 | + | 258 | Protein_132 | transposase | - |
| NLZ09_RS23285 (114957) | 114957..115814 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ09_RS23290 (115811) | 115811..116668 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| NLZ09_RS23295 (116665) | 116665..117492 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| NLZ09_RS23300 (117492) | 117492..118406 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| NLZ09_RS23305 (118762) | 118762..119459 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| NLZ09_RS23310 (119639) | 119639..120152 | - | 514 | Protein_138 | DUF4113 domain-containing protein | - |
| NLZ09_RS23315 (120213) | 120213..120317 | - | 105 | Protein_139 | AAA family ATPase | - |
| NLZ09_RS23320 (120319) | 120319..120642 | - | 324 | Protein_140 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|