MGE detailed information
MGE type: Prophage MGE length: 78210 bp
Accession: NZ_CP100525 Location: 3589233..3667442 Organism: Escherichia coli strain LH13-b Replicon: chromosome
Accession: NZ_CP100525 Location: 3589233..3667442 Organism: Escherichia coli strain LH13-b Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ09_RS17455 (3584792) | 3584792..3585130 | + | 339 | Protein_3415 | LysR substrate-binding domain-containing protein | - |
| NLZ09_RS17460 (3585789) | 3585789..3586691 | - | 903 | WP_074468291.1 | hypothetical protein | - |
| NLZ09_RS17465 (3587310) | 3587310..3589199 | + | 1890 | WP_021540779.1 | DUF262 domain-containing protein | - |
| NLZ09_RS17470 (3589290) | 3589290..3589424 | - | 135 | Protein_3418 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| NLZ09_RS17475 (3589454) | 3589454..3589843 | + | 390 | WP_225377187.1 | hypothetical protein | - |
| NLZ09_RS17480 (3589864) | 3589864..3590313 | + | 450 | WP_024235286.1 | tail fiber assembly protein | - |
| NLZ09_RS17485 (3590285) | 3590285..3590887 | - | 603 | WP_254541815.1 | tail fiber assembly protein | - |
| NLZ09_RS17490 (3590887) | 3590887..3591687 | - | 801 | WP_254541816.1 | phage tail protein | - |
| NLZ09_RS17495 (3591691) | 3591691..3592275 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| NLZ09_RS17500 (3592266) | 3592266..3593324 | - | 1059 | WP_060615013.1 | baseplate J/gp47 family protein | - |
| NLZ09_RS17505 (3593311) | 3593311..3593736 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| NLZ09_RS17510 (3593736) | 3593736..3594284 | - | 549 | WP_115202859.1 | phage baseplate assembly protein V | - |
| NLZ09_RS17515 (3594284) | 3594284..3595363 | - | 1080 | WP_254541817.1 | baseplate protein | - |
| NLZ09_RS17520 (3595360) | 3595360..3596736 | - | 1377 | WP_254541818.1 | DNA circularization N-terminal domain-containing protein | - |
| NLZ09_RS17525 (3596761) | 3596761..3598668 | - | 1908 | WP_028125997.1 | phage tail tape measure protein | - |
| NLZ09_RS17530 (3598753) | 3598753..3599076 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| NLZ09_RS17535 (3599073) | 3599073..3599429 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| NLZ09_RS17540 (3599429) | 3599429..3600925 | - | 1497 | WP_254541819.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NLZ09_RS17545 (3600909) | 3600909..3601079 | - | 171 | WP_054413201.1 | DUF2635 domain-containing protein | - |
| NLZ09_RS17550 (3601088) | 3601088..3601648 | - | 561 | WP_001407136.1 | hypothetical protein | - |
| NLZ09_RS17555 (3601645) | 3601645..3602151 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| NLZ09_RS17560 (3602126) | 3602126..3602536 | - | 411 | WP_097329936.1 | phage head closure protein | - |
| NLZ09_RS17565 (3602533) | 3602533..3602856 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| NLZ09_RS17570 (3602859) | 3602859..3603059 | - | 201 | WP_069720761.1 | hypothetical protein | - |
| NLZ09_RS17575 (3603108) | 3603108..3604313 | - | 1206 | WP_032173801.1 | phage major capsid protein | - |
| NLZ09_RS17580 (3604328) | 3604328..3604978 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| NLZ09_RS17585 (3604956) | 3604956..3606197 | - | 1242 | WP_001514795.1 | phage portal protein | - |
| NLZ09_RS17590 (3606197) | 3606197..3606379 | - | 183 | WP_000605606.1 | protein YmfR | - |
| NLZ09_RS17595 (3606391) | 3606391..3608124 | - | 1734 | WP_097330204.1 | terminase large subunit | - |
| NLZ09_RS17600 (3608121) | 3608121..3608615 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| NLZ09_RS17605 (3608741) | 3608741..3609091 | - | 351 | WP_021570659.1 | HNH endonuclease signature motif containing protein | - |
| NLZ09_RS17610 (3609219) | 3609219..3609593 | + | 375 | WP_021570658.1 | hypothetical protein | - |
| NLZ09_RS17615 (3609672) | 3609672..3609920 | - | 249 | WP_122985322.1 | peptidase | - |
| NLZ09_RS17620 (3609805) | 3609805..3610197 | - | 393 | WP_021570657.1 | DUF2570 domain-containing protein | - |
| NLZ09_RS17625 (3610181) | 3610181..3610657 | - | 477 | WP_021570656.1 | glycoside hydrolase family protein | - |
| NLZ09_RS17630 (3610661) | 3610661..3610987 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| NLZ09_RS17635 (3611254) | 3611254..3612000 | + | 747 | WP_001406331.1 | hypothetical protein | - |
| NLZ09_RS17640 (3612051) | 3612051..3612416 | - | 366 | WP_199777249.1 | antiterminator Q family protein | - |
| NLZ09_RS17645 (3612431) | 3612431..3613420 | - | 990 | WP_254541820.1 | DUF968 domain-containing protein | - |
| NLZ09_RS17650 (3613428) | 3613428..3614237 | - | 810 | WP_001061380.1 | KilA-N domain-containing protein | - |
| NLZ09_RS17655 (3614257) | 3614257..3614646 | - | 390 | WP_000767084.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NLZ09_RS17660 (3614643) | 3614643..3614969 | - | 327 | WP_063090994.1 | LexA family transcriptional regulator | - |
| NLZ09_RS17665 (3614966) | 3614966..3615619 | - | 654 | WP_254541821.1 | phage N-6-adenine-methyltransferase | - |
| NLZ09_RS17670 (3615619) | 3615619..3616113 | - | 495 | WP_001407082.1 | PerC family transcriptional regulator | - |
| NLZ09_RS17675 (3616110) | 3616110..3617051 | - | 942 | WP_021528956.1 | helix-turn-helix domain-containing protein | - |
| NLZ09_RS17680 (3617041) | 3617041..3617220 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| NLZ09_RS17685 (3617396) | 3617396..3617947 | - | 552 | WP_103053488.1 | protein YmfL | - |
| NLZ09_RS17690 (3617970) | 3617970..3618218 | - | 249 | WP_000187185.1 | YdaS family helix-turn-helix protein | - |
| NLZ09_RS17695 (3618354) | 3618354..3619040 | + | 687 | WP_000853319.1 | helix-turn-helix transcriptional regulator | - |
| NLZ09_RS17700 (3619023) | 3619023..3619913 | - | 891 | WP_000389078.1 | BRCT domain-containing protein | - |
| NLZ09_RS17705 (3620179) | 3620179..3620385 | + | 207 | WP_000549626.1 | hypothetical protein | - |
| NLZ09_RS17710 (3620357) | 3620357..3620791 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| NLZ09_RS17715 (3620935) | 3620935..3621245 | + | 311 | Protein_3467 | hypothetical protein | - |
| NLZ09_RS17720 (3621260) | 3621260..3621622 | + | 363 | WP_000135682.1 | protein YfdP | - |
| NLZ09_RS17725 (3621688) | 3621688..3622512 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| NLZ09_RS17730 (3622640) | 3622640..3623176 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| NLZ09_RS17735 (3623167) | 3623167..3623529 | + | 363 | WP_001242748.1 | hypothetical protein | - |
| NLZ09_RS17740 (3623529) | 3623529..3623834 | + | 306 | WP_000206733.1 | protein YfdT | - |
| NLZ09_RS17745 (3623834) | 3623834..3624184 | + | 351 | WP_254541822.1 | helix-turn-helix domain-containing protein | - |
| NLZ09_RS17750 (3624106) | 3624106..3625224 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| NLZ09_RS17755 (3625450) | 3625450..3626769 | + | 1320 | WP_000144688.1 | Prophage integrase IntA ; Integrase | Integrase |
| NLZ09_RS17760 (3626862) | 3626862..3627710 | - | 849 | WP_112044913.1 | DUF4942 domain-containing protein | - |
| NLZ09_RS17765 (3627795) | 3627795..3627992 | - | 198 | WP_000839267.1 | DUF957 domain-containing protein | - |
| NLZ09_RS17770 (3628004) | 3628004..3628492 | - | 489 | WP_112044914.1 | DUF5983 family protein | - |
| NLZ09_RS17775 (3628477) | 3628477..3628866 | - | 390 | WP_112044915.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| NLZ09_RS17780 (3628956) | 3628956..3629324 | - | 369 | WP_112044916.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NLZ09_RS17785 (3629374) | 3629374..3630018 | - | 645 | WP_059252084.1 | hypothetical protein | - |
| NLZ09_RS17790 (3630033) | 3630033..3630254 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| NLZ09_RS17795 (3630323) | 3630323..3630799 | - | 477 | WP_001186747.1 | RadC family protein | - |
| NLZ09_RS17800 (3630814) | 3630814..3631299 | - | 486 | WP_042631074.1 | antirestriction protein | - |
| NLZ09_RS17805 (3631390) | 3631390..3632208 | - | 819 | WP_001234702.1 | DUF932 domain-containing protein | - |
| NLZ09_RS17810 (3632536) | 3632536..3635382 | - | 2847 | WP_112044917.1 | Ag43/Cah family autotransporter adhesin | - |
| NLZ09_RS17815 (3635753) | 3635753..3636625 | - | 873 | WP_053271975.1 | GTPase family protein | - |
| NLZ09_RS17820 (3636889) | 3636889..3638445 | + | 1557 | WP_254541823.1 | type I restriction-modification system subunit M | - |
| NLZ09_RS17825 (3638442) | 3638442..3639587 | + | 1146 | WP_254541824.1 | restriction endonuclease subunit S | - |
| NLZ09_RS17830 (3639709) | 3639709..3642825 | + | 3117 | WP_249573504.1 | HsdR family type I site-specific deoxyribonuclease | - |
| NLZ09_RS17835 (3642903) | 3642903..3643271 | - | 369 | WP_170938157.1 | hypothetical protein | - |
| NLZ09_RS17840 (3643777) | 3643777..3644095 | - | 319 | Protein_3492 | IS3 family transposase IS1351 | Transposase |
| NLZ09_RS17845 (3644141) | 3644141..3644476 | - | 336 | WP_096100219.1 | EcsC family protein | - |
| NLZ09_RS17850 (3644575) | 3644575..3645272 | + | 698 | WP_230139069.1 | IS1 family transposase IS1G | Transposase |
| NLZ09_RS17855 (3645288) | 3645288..3645935 | + | 648 | Protein_3495 | Type 1 fimbrin D-mannose specific adhesin | VF |
| NLZ09_RS17860 (3646110) | 3646110..3647453 | - | 1344 | WP_000558250.1 | gluconate permease GntP | - |
| NLZ09_RS17865 (3647793) | 3647793..3648977 | + | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| NLZ09_RS17870 (3649058) | 3649058..3650518 | + | 1461 | WP_000208194.1 | fructuronate reductase | - |
| NLZ09_RS17875 (3650733) | 3650733..3651302 | + | 570 | Protein_3499 | GntR family transcriptional regulator | - |
| NLZ09_RS17880 (3651359) | 3651359..3652056 | + | 698 | WP_230139069.1 | IS1 family transposase IS1R | Transposase |
| NLZ09_RS17885 (3652328) | 3652328..3652960 | - | 633 | WP_032234106.1 | SANT/Myb-like DNA-binding domain-containing protein | - |
| NLZ09_RS17890 (3652976) | 3652976..3653500 | - | 525 | WP_249941681.1 | VasL domain-containing protein | - |
| NLZ09_RS17895 (3653552) | 3653552..3653689 | - | 138 | Protein_3503 | hypothetical protein | - |
| NLZ09_RS17900 (3654086) | 3654086..3654352 | - | 267 | Protein_3504 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| NLZ09_RS17905 (3654851) | 3654851..3655231 | + | 381 | WP_029364370.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ09_RS17910 (3655228) | 3655228..3655575 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ09_RS17915 (3655625) | 3655625..3657163 | + | 1539 | WP_072643824.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ09_RS17920 (3657164) | 3657164..3657446 | + | 283 | Protein_3508 | iron-containing alcohol dehydrogenase | - |
| NLZ09_RS17925 (3657601) | 3657601..3658335 | - | 735 | WP_029396387.1 | helix-turn-helix domain-containing protein | - |
| NLZ09_RS17930 (3658425) | 3658425..3658559 | + | 135 | WP_001444908.1 | PerC family transcriptional regulator | - |
| NLZ09_RS17935 (3658773) | 3658773..3658883 | - | 111 | Protein_3511 | type VI secretion system contractile sheath small subunit | - |
| NLZ09_RS17945 (3660285) | 3660285..3660627 | - | 343 | Protein_3513 | DEAD/DEAH box helicase | - |
| NLZ09_RS17950 (3660734) | 3660734..3661297 | - | 564 | WP_063084858.1 | inovirus-type Gp2 protein | - |
| NLZ09_RS17955 (3662188) | 3662188..3663621 | - | 1434 | WP_089069420.1 | YfjI family protein | - |
| NLZ09_RS17960 (3663873) | 3663873..3664097 | - | 225 | Protein_3516 | YfjI family protein | - |
| NLZ09_RS17965 (3664203) | 3664203..3664430 | - | 228 | WP_039022145.1 | AlpA family phage regulatory protein | - |
| NLZ09_RS17970 (3665122) | 3665122..3666759 | + | 1638 | WP_039025855.1 | hypothetical protein | - |
| NLZ09_RS17975 (3666846) | 3666846..3667442 | - | 597 | WP_254541825.1 | hypothetical protein | - |
| NLZ09_RS17985 (3667943) | 3667943..3669196 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| NLZ09_RS17990 (3669208) | 3669208..3670311 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| NLZ09_RS17995 (3670599) | 3670599..3671654 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| NLZ09_RS18000 (3671693) | 3671693..3672094 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|