MGE detailed information
MGE type: Prophage MGE length: 39897 bp
Accession: NZ_CP100486 Location: 2178302..2218198 Organism: Escherichia coli strain LH85-a Replicon: chromosome
Accession: NZ_CP100486 Location: 2178302..2218198 Organism: Escherichia coli strain LH85-a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ16_RS10350 () | 2175026..2175478 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| NLZ16_RS10355 () | 2175507..2176247 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NLZ16_RS10360 () | 2176282..2176803 | + | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NLZ16_RS10365 () | 2176805..2177407 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| NLZ16_RS10370 () | 2177478..2177543 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| NLZ16_RS10375 () | 2177682..2178293 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| NLZ16_RS10380 () | 2178302..2179312 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| NLZ16_RS10385 () | 2179462..2180247 | - | 786 | WP_000571479.1 | GTPase Der | VF |
| NLZ16_RS10390 () | 2180244..2180999 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| NLZ16_RS10395 () | 2181078..2182010 | + | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NLZ16_RS10400 () | 2182026..2183348 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| NLZ16_RS10405 () | 2183468..2184439 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| NLZ16_RS10410 () | 2184571..2186013 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| NLZ16_RS10415 () | 2186141..2187010 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| NLZ16_RS10420 () | 2187348..2188823 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| NLZ16_RS10425 () | 2189058..2190869 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| NLZ16_RS10430 () | 2190906..2191547 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NLZ16_RS10435 () | 2191602..2192780 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NLZ16_RS10440 () | 2192914..2193204 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| NLZ16_RS10445 () | 2193271..2193627 | + | 357 | WP_001295500.1 | protein YebF | - |
| NLZ16_RS10450 () | 2193954..2194613 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| NLZ16_RS10455 () | 2194777..2195946 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NLZ16_RS10460 () | 2196003..2196428 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| NLZ16_RS10465 () | 2196585..2198645 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| NLZ16_RS10470 () | 2198642..2199304 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| NLZ16_RS10475 () | 2199328..2199984 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| NLZ16_RS10480 () | 2200086..2200316 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| NLZ16_RS10485 () | 2200455..2200829 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| NLZ16_RS10490 () | 2200833..2201705 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| NLZ16_RS10495 () | 2201718..2202059 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2202087..2202358 | - | 272 | - | - | Antitoxin Detail |
| - | 2202217..2202320 | + | 104 | - | - | Toxin Detail |
| NLZ16_RS10500 () | 2202455..2203111 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| NLZ16_RS10505 () | 2203112..2203303 | - | 192 | WP_001296140.1 | YebW family protein | - |
| NLZ16_RS10510 () | 2203408..2203644 | - | 237 | WP_001295499.1 | YebV family protein | - |
| NLZ16_RS10515 () | 2203762..2205201 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NLZ16_RS10520 () | 2205281..2207914 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| NLZ16_RS10525 () | 2207883..2209166 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| NLZ16_RS10530 () | 2209296..2209793 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| NLZ16_RS10535 () | 2209890..2210588 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| NLZ16_RS10540 () | 2210608..2212656 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| NLZ16_RS10545 () | 2212848..2213729 | + | 882 | WP_000984517.1 | protease HtpX | - |
| NLZ16_RS10550 () | 2213775..2215148 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| NLZ16_RS10555 () | 2215325..2216116 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| NLZ16_RS10560 () | 2216260..2216499 | - | 240 | WP_001211011.1 | YobH family protein | - |
| NLZ16_RS10565 () | 2216658..2216801 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| NLZ16_RS10570 () | 2216876..2217163 | + | 288 | WP_001006855.1 | YebO family protein | - |
| NLZ16_RS10575 () | 2217833..2217976 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| NLZ16_RS10580 () | 2217989..2218198 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NLZ16_RS10585 () | 2218364..2219173 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NLZ16_RS10590 () | 2219170..2219736 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| NLZ16_RS10595 () | 2220165..2220623 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| NLZ16_RS10600 () | 2220678..2221529 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| NLZ16_RS10605 () | 2221542..2222342 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|