MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 126920 bp
Accession: NZ_CP100431 Location: 1821254..1948173 Organism: Streptococcus suis strain 1521251 Replicon: chromosome
Accession: NZ_CP100431 Location: 1821254..1948173 Organism: Streptococcus suis strain 1521251 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY77_RS09105 (NLY77_09105) | 1816258..1817058 | + | 801 | WP_013730319.1 | ABC transporter ATP-binding protein | - |
| NLY77_RS09110 (NLY77_09110) | 1817055..1817984 | + | 930 | WP_009909659.1 | ABC transporter substrate-binding protein | - |
| NLY77_RS09115 (NLY77_09115) | 1817998..1819023 | + | 1026 | WP_009909658.1 | iron ABC transporter permease | - |
| NLY77_RS09120 (NLY77_09120) | 1819020..1820021 | + | 1002 | WP_024386629.1 | iron ABC transporter permease | - |
| NLY77_RS09125 (NLY77_09125) | 1820040..1820519 | - | 480 | WP_024394378.1 | glutathione peroxidase | - |
| NLY77_RS09130 (NLY77_09130) | 1820533..1821249 | - | 717 | WP_013730318.1 | pseudouridine synthase | - |
| NLY77_RS09135 (NLY77_09135) | 1821388..1822344 | + | 957 | WP_013730317.1 | glutathione S-transferase family protein | - |
| NLY77_RS09140 (NLY77_09140) | 1822522..1822779 | + | 258 | WP_250636740.1 | low temperature requirement protein A | - |
| NLY77_RS09145 (NLY77_09145) | 1822799..1823512 | + | 714 | WP_009909651.1 | low temperature requirement protein A | - |
| NLY77_RS09150 (NLY77_09150) | 1823601..1824866 | - | 1266 | WP_024394377.1 | D-alanyl-lipoteichoic acid biosynthesis protein DltD | - |
| NLY77_RS09155 (NLY77_09155) | 1824859..1825098 | - | 240 | WP_002937198.1 | D-alanyl carrier protein | VF |
| NLY77_RS09160 (NLY77_09160) | 1825141..1826382 | - | 1242 | WP_013730314.1 | hypothetical protein | VF |
| NLY77_RS09165 (NLY77_09165) | 1826379..1827914 | - | 1536 | WP_013730313.1 | D-alanine--poly(phosphoribitol) ligase subunit DltA | - |
| NLY77_RS09170 (NLY77_09170) | 1827931..1828056 | - | 126 | WP_002937209.1 | teichoic acid D-Ala incorporation-associated protein DltX | - |
| NLY77_RS09175 (NLY77_09175) | 1828266..1829113 | + | 848 | WP_114876550.1 | IS630 family transposase | - |
| NLY77_RS09180 (NLY77_09180) | 1829425..1829772 | - | 348 | WP_013730312.1 | hypothetical protein | - |
| NLY77_RS09185 (NLY77_09185) | 1829958..1830338 | - | 381 | WP_013730311.1 | hypothetical protein | - |
| NLY77_RS09190 (NLY77_09190) | 1830553..1831557 | + | 1005 | WP_002935211.1 | IS5 family transposase ISSth7 | Transposase |
| NLY77_RS09195 (NLY77_09195) | 1831966..1832280 | - | 315 | WP_013730310.1 | hypothetical protein | - |
| NLY77_RS09200 (NLY77_09200) | 1832698..1833045 | - | 348 | WP_002937220.1 | hypothetical protein | - |
| NLY77_RS09205 (NLY77_09205) | 1833520..1834224 | - | 705 | WP_002937230.1 | glucosamine-6-phosphate deaminase | - |
| NLY77_RS09210 (NLY77_09210) | 1834572..1835600 | + | 1029 | WP_002937231.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| NLY77_RS09215 (NLY77_09215) | 1835664..1836137 | + | 474 | WP_002937233.1 | arginine repressor | - |
| NLY77_RS09220 (NLY77_09220) | 1836757..1837992 | - | 1236 | Protein_1791 | family 20 glycosylhydrolase | - |
| NLY77_RS09225 (NLY77_09225) | 1838713..1840392 | - | 1680 | Protein_1792 | family 16 glycosylhydrolase | - |
| NLY77_RS09230 (NLY77_09230) | 1841057..1842397 | - | 1341 | WP_024394778.1 | dipeptidase | - |
| NLY77_RS09235 (NLY77_09235) | 1842516..1844018 | - | 1503 | WP_013730305.1 | YfcC family protein | - |
| NLY77_RS09240 (NLY77_09240) | 1844361..1845308 | - | 948 | WP_009909634.1 | carbamate kinase | - |
| NLY77_RS09245 (NLY77_09245) | 1845426..1846439 | - | 1014 | WP_011922164.1 | ornithine carbamoyltransferase | - |
| NLY77_RS09250 (NLY77_09250) | 1846458..1846898 | - | 441 | WP_002941721.1 | GNAT family N-acetyltransferase | - |
| NLY77_RS09255 (NLY77_09255) | 1846898..1848130 | - | 1233 | WP_024383696.1 | arginine deiminase | - |
| NLY77_RS09260 (NLY77_09260) | 1848389..1849084 | - | 696 | WP_014638193.1 | Crp/Fnr family transcriptional regulator | - |
| NLY77_RS09265 (NLY77_09265) | 1849742..1850659 | - | 918 | WP_002937252.1 | DNA-binding protein WhiA | - |
| NLY77_RS09270 (NLY77_09270) | 1850656..1851630 | - | 975 | WP_002937257.1 | YvcK family protein | - |
| NLY77_RS09275 (NLY77_09275) | 1851627..1852514 | - | 888 | WP_002937261.1 | RNase adapter RapZ | - |
| NLY77_RS09280 (NLY77_09280) | 1852536..1852913 | - | 378 | WP_013730303.1 | RidA family protein | - |
| NLY77_RS09285 (NLY77_09285) | 1853097..1854416 | - | 1320 | WP_002937278.1 | MATE family efflux transporter | - |
| NLY77_RS09290 (NLY77_09290) | 1854643..1855989 | - | 1347 | WP_002941729.1 | asparagine--tRNA ligase | - |
| NLY77_RS09295 (NLY77_09295) | 1856004..1857185 | - | 1182 | WP_043033076.1 | pyridoxal phosphate-dependent aminotransferase | - |
| NLY77_RS09300 (NLY77_09300) | 1857182..1857679 | - | 498 | WP_043033075.1 | DUF5590 domain-containing protein | - |
| NLY77_RS09305 (NLY77_09305) | 1857893..1858342 | + | 450 | WP_002938613.1 | MarR family transcriptional regulator | - |
| NLY77_RS09310 (NLY77_09310) | 1858405..1858950 | + | 546 | WP_002941732.1 | NADPH-dependent FMN reductase | - |
| NLY77_RS09315 (NLY77_09315) | 1859050..1860161 | - | 1112 | Protein_1810 | UDP-galactopyranose mutase | VF |
| NLY77_RS09320 (NLY77_09320) | 1860387..1860650 | + | 264 | Protein_1811 | IS5 family transposase IS1515 | Transposase |
| NLY77_RS09325 (NLY77_09325) | 1860756..1862510 | - | 1755 | WP_002938620.1 | hypothetical protein ; Integrase | Integrase |
| NLY77_RS09330 (NLY77_09330) | 1862674..1862835 | - | 162 | WP_153299043.1 | hypothetical protein | - |
| NLY77_RS09335 (NLY77_09335) | 1862970..1863194 | - | 225 | WP_000284847.1 | helix-turn-helix transcriptional regulator | - |
| NLY77_RS09340 (NLY77_09340) | 1863383..1864270 | - | 888 | WP_000769130.1 | aldose 1-epimerase family protein | - |
| NLY77_RS09345 (NLY77_09345) | 1864293..1864571 | - | 279 | WP_002938623.1 | DUF3884 family protein | - |
| NLY77_RS09350 (NLY77_09350) | 1864596..1866002 | - | 1407 | WP_002938631.1 | 6-phospho-beta-galactosidase | - |
| NLY77_RS09355 (NLY77_09355) | 1866068..1867783 | - | 1716 | WP_002938634.1 | lactose-specific PTS transporter subunit EIIC | - |
| NLY77_RS09360 (NLY77_09360) | 1867783..1868100 | - | 318 | WP_003082802.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| NLY77_RS09365 (NLY77_09365) | 1868128..1869108 | - | 981 | WP_003084249.1 | tagatose-bisphosphate aldolase | - |
| NLY77_RS09370 (NLY77_09370) | 1869111..1870043 | - | 933 | WP_002936379.1 | tagatose-6-phosphate kinase | - |
| NLY77_RS09375 (NLY77_09375) | 1870055..1870570 | - | 516 | WP_002936382.1 | galactose-6-phosphate isomerase subunit LacB | - |
| NLY77_RS09380 (NLY77_09380) | 1870604..1871029 | - | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| NLY77_RS09385 (NLY77_09385) | 1871266..1872216 | - | 951 | WP_043033073.1 | ROK family glucokinase | - |
| NLY77_RS09390 (NLY77_09390) | 1872397..1873158 | + | 762 | WP_002936387.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NLY77_RS09395 (NLY77_09395) | 1873167..1873871 | + | 705 | WP_002936389.1 | HAD family hydrolase | - |
| NLY77_RS09400 (NLY77_09400) | 1873915..1875780 | - | 1866 | WP_044674092.1 | SAG1250 family conjugative relaxase | - |
| NLY77_RS09405 (NLY77_09405) | 1875767..1876132 | - | 366 | WP_000263053.1 | plasmid mobilization relaxosome protein MobC | - |
| NLY77_RS09410 (NLY77_09410) | 1876142..1876501 | - | 360 | WP_002936401.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| NLY77_RS09415 (NLY77_09415) | 1876842..1877084 | - | 243 | WP_002936408.1 | hypothetical protein | - |
| NLY77_RS09420 (NLY77_09420) | 1877138..1878205 | - | 1068 | WP_172008925.1 | Abi family protein | - |
| NLY77_RS09425 (NLY77_09425) | 1878383..1878679 | - | 297 | WP_002936411.1 | hypothetical protein | - |
| NLY77_RS09430 (NLY77_09430) | 1878729..1879118 | - | 390 | WP_000048066.1 | DUF5945 family protein | - |
| NLY77_RS09435 (NLY77_09435) | 1879115..1879342 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| NLY77_RS09440 (NLY77_09440) | 1879396..1880472 | - | 1077 | WP_002936424.1 | toprim domain-containing protein | - |
| NLY77_RS09445 (NLY77_09445) | 1880511..1881149 | - | 639 | WP_104929832.1 | peptidylprolyl isomerase | - |
| NLY77_RS09450 (NLY77_09450) | 1881245..1881535 | - | 291 | WP_014636941.1 | DUF5966 family protein | - |
| NLY77_RS09455 (NLY77_09455) | 1881549..1881848 | - | 300 | WP_172008915.1 | DUF5962 family protein | - |
| NLY77_RS09460 (NLY77_09460) | 1881919..1888743 | - | 6825 | WP_254410575.1 | SNF2-related protein | - |
| NLY77_RS09465 (NLY77_09465) | 1888792..1889343 | - | 552 | WP_014636943.1 | hypothetical protein | - |
| NLY77_RS09470 (NLY77_09470) | 1889327..1889518 | - | 192 | WP_001068448.1 | calcium-binding protein | - |
| NLY77_RS09475 (NLY77_09475) | 1889519..1894414 | - | 4896 | WP_043032985.1 | hypothetical protein | VF |
| NLY77_RS09480 (NLY77_09480) | 1894683..1895318 | - | 636 | WP_024394859.1 | hypothetical protein | - |
| NLY77_RS09485 (NLY77_09485) | 1895896..1896645 | - | 750 | WP_024394858.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| NLY77_RS09490 (NLY77_09490) | 1896660..1897529 | - | 870 | WP_226313481.1 | GHKL domain-containing protein | - |
| NLY77_RS09495 (NLY77_09495) | 1897989..1898144 | - | 156 | WP_000794567.1 | hypothetical protein | - |
| NLY77_RS09500 (NLY77_09500) | 1898166..1899176 | - | 1011 | WP_254410576.1 | Lactococcin-G-processing and transport ATP-binding protein LagD | VF |
| NLY77_RS09505 (NLY77_09505) | 1899243..1900247 | + | 1005 | WP_002935211.1 | IS5 family transposase ISSth7 | Transposase |
| NLY77_RS09510 (NLY77_09510) | 1900331..1901512 | - | 1182 | WP_254410577.1 | ABC transporter transmembrane domain-containing protein | - |
| NLY77_RS09515 (NLY77_09515) | 1901715..1901906 | - | 192 | WP_002935101.1 | hypothetical protein | - |
| NLY77_RS09520 (NLY77_09520) | 1901995..1902267 | - | 273 | WP_002935103.1 | DUF3884 family protein | - |
| NLY77_RS09525 (NLY77_09525) | 1902296..1903612 | - | 1317 | WP_002935107.1 | hypothetical protein | VF |
| NLY77_RS09530 (NLY77_09530) | 1903800..1903961 | - | 162 | WP_002935108.1 | agglutinin receptor | - |
| NLY77_RS09535 (NLY77_09535) | 1904244..1904834 | + | 591 | WP_002935109.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| NLY77_RS09540 (NLY77_09540) | 1904831..1905676 | + | 846 | WP_024394846.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| NLY77_RS09545 (NLY77_09545) | 1905738..1908539 | - | 2802 | WP_254410578.1 | phage tail tip lysozyme | - |
| NLY77_RS09550 (NLY77_09550) | 1908541..1910892 | - | 2352 | WP_172008962.1 | AAA family ATPase | - |
| NLY77_RS09555 (NLY77_09555) | 1910849..1911202 | - | 354 | WP_014636950.1 | PrgI family protein | - |
| NLY77_RS09560 (NLY77_09560) | 1911264..1912118 | - | 855 | WP_172008960.1 | conjugal transfer protein TrbL | - |
| NLY77_RS09565 (NLY77_09565) | 1912137..1912379 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| NLY77_RS09570 (NLY77_09570) | 1912397..1914214 | - | 1818 | WP_172008958.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NLY77_RS09575 (NLY77_09575) | 1914214..1914702 | - | 489 | WP_002935118.1 | hypothetical protein | - |
| NLY77_RS09580 (NLY77_09580) | 1914780..1915364 | - | 585 | WP_172008956.1 | CPBP family intramembrane metalloprotease | - |
| NLY77_RS09585 (NLY77_09585) | 1915367..1915600 | - | 234 | WP_014636955.1 | hypothetical protein | - |
| NLY77_RS09590 (NLY77_09590) | 1915609..1915992 | - | 384 | WP_014636956.1 | hypothetical protein | - |
| NLY77_RS09595 (NLY77_09595) | 1916003..1916431 | - | 429 | WP_014636957.1 | hypothetical protein | - |
| NLY77_RS09600 (NLY77_09600) | 1916415..1917770 | - | 1356 | WP_172008954.1 | DNA (cytosine-5-)-methyltransferase | - |
| NLY77_RS09605 (NLY77_09605) | 1917919..1918737 | - | 819 | WP_172008952.1 | replication initiator protein A | - |
| NLY77_RS09610 (NLY77_09610) | 1918740..1918907 | - | 168 | WP_023370100.1 | hypothetical protein | - |
| NLY77_RS09615 (NLY77_09615) | 1919118..1920479 | - | 1362 | WP_024394786.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| NLY77_RS09620 (NLY77_09620) | 1920546..1921868 | - | 1323 | WP_024417251.1 | LCP family protein | - |
| NLY77_RS09625 (NLY77_09625) | 1921880..1922707 | - | 828 | WP_024381706.1 | prephenate dehydratase | - |
| NLY77_RS09630 (NLY77_09630) | 1922698..1923189 | - | 492 | WP_014636886.1 | shikimate kinase | - |
| NLY77_RS09635 (NLY77_09635) | 1923198..1924478 | - | 1281 | WP_014636887.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| NLY77_RS09640 (NLY77_09640) | 1924693..1926045 | + | 1353 | WP_225533320.1 | ATP-binding protein | - |
| NLY77_RS09645 (NLY77_09645) | 1926064..1926972 | + | 909 | WP_225533317.1 | tetratricopeptide repeat protein | - |
| NLY77_RS09650 (NLY77_09650) | 1927053..1928198 | - | 1146 | WP_226313457.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NLY77_RS09655 (NLY77_09655) | 1928294..1929190 | + | 897 | WP_013730292.1 | Tyrosine recombinase XerC | VF |
| NLY77_RS09660 (NLY77_09660) | 1929222..1929407 | - | 186 | WP_013730291.1 | hypothetical protein | - |
| NLY77_RS09665 (NLY77_09665) | 1929486..1929623 | + | 138 | Protein_1880 | IS110 family transposase | - |
| NLY77_RS09670 (NLY77_09670) | 1929696..1929896 | + | 201 | WP_013730290.1 | IS66 family transposase ISBthe6 | Transposase |
| NLY77_RS09675 (NLY77_09675) | 1929850..1931202 | + | 1353 | WP_013730289.1 | IS66 family transposase ISSwo2 | Transposase |
| NLY77_RS09680 (NLY77_09680) | 1931449..1932717 | + | 1269 | Protein_1883 | transposase | - |
| NLY77_RS09685 (NLY77_09685) | 1932829..1934076 | - | 1248 | WP_024406028.1 | UDP-glucose 6-dehydrogenase | VF |
| NLY77_RS09690 (NLY77_09690) | 1934134..1935573 | - | 1440 | WP_024406029.1 | oligosaccharide flippase family protein | - |
| NLY77_RS09695 (NLY77_09695) | 1935591..1936865 | - | 1275 | WP_254410579.1 | O-antigen polymerase | - |
| NLY77_RS09700 (NLY77_09700) | 1936913..1937773 | - | 861 | WP_024406031.1 | hypothetical protein | VF |
| NLY77_RS09705 (NLY77_09705) | 1937770..1938393 | - | 624 | WP_024406032.1 | hypothetical protein | - |
| NLY77_RS09710 (NLY77_09710) | 1938409..1939461 | - | 1053 | WP_024406033.1 | glycosyltransferase family 4 protein | - |
| NLY77_RS09715 (NLY77_09715) | 1939493..1940278 | - | 786 | WP_014636875.1 | hypothetical protein | VF |
| NLY77_RS09720 (NLY77_09720) | 1940296..1941510 | - | 1215 | WP_014636874.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| NLY77_RS09725 (NLY77_09725) | 1941520..1942218 | - | 699 | WP_014636873.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| NLY77_RS09730 (NLY77_09730) | 1942663..1944489 | - | 1827 | WP_024390822.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| NLY77_RS09735 (NLY77_09735) | 1944519..1945250 | - | 732 | WP_013730278.1 | Tyrosine-protein phosphatase CpsB | VF |
| NLY77_RS09740 (NLY77_09740) | 1945289..1945975 | - | 687 | WP_013730277.1 | Tyrosine-protein kinase CpsD | VF |
| NLY77_RS09745 (NLY77_09745) | 1945985..1946674 | - | 690 | WP_013730276.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| NLY77_RS09750 (NLY77_09750) | 1946690..1948129 | - | 1440 | WP_013730275.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU | VF |
| NLY77_RS09755 (NLY77_09755) | 1948259..1948993 | - | 735 | WP_024381470.1 | peroxide stress protein YaaA | - |
| NLY77_RS09760 (NLY77_09760) | 1949116..1950375 | + | 1260 | WP_172008948.1 | PLP-dependent aminotransferase family protein | - |
| NLY77_RS09765 (NLY77_09765) | 1950474..1951325 | - | 852 | WP_014636868.1 | DegV family protein | - |
| NLY77_RS09770 (NLY77_09770) | 1951452..1951856 | + | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| NLY77_RS09775 (NLY77_09775) | 1951879..1952664 | - | 786 | WP_024394527.1 | pyrroline-5-carboxylate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|