MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 151241 bp
Accession: NZ_CP100418 Location: 909360..1060600 Organism: Streptococcus suis strain STC104 Replicon: chromosome
Accession: NZ_CP100418 Location: 909360..1060600 Organism: Streptococcus suis strain STC104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NLY35_RS04605 (NLY35_04605) | 907779..908630 | - | 852 | WP_024417221.1 | NAD(P)H-hydrate dehydratase | - |
NLY35_RS04610 (NLY35_04610) | 908728..909351 | + | 624 | WP_012775083.1 | endonuclease III | - |
NLY35_RS04615 (NLY35_04615) | 909637..910620 | + | 984 | WP_012775084.1 | GMP reductase | - |
NLY35_RS04620 (NLY35_04620) | 910690..912039 | + | 1350 | Protein_863 | MATE family efflux transporter | - |
NLY35_RS04625 (NLY35_04625) | 912137..912655 | + | 519 | WP_002934950.1 | ribosome maturation factor RimM | - |
NLY35_RS04630 (NLY35_04630) | 912645..913370 | + | 726 | WP_002934953.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
NLY35_RS04635 (NLY35_04635) | 913401..914456 | + | 1056 | WP_002934954.1 | histidinol-phosphate transaminase | - |
NLY35_RS04640 (NLY35_04640) | 914560..915309 | + | 750 | WP_009909780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
NLY35_RS04645 (NLY35_04645) | 915306..916217 | + | 912 | WP_002934956.1 | 1-phosphofructokinase | - |
NLY35_RS04650 (NLY35_04650) | 916214..918169 | + | 1956 | WP_002934957.1 | fructose-specific PTS transporter subunit EIIC | - |
NLY35_RS04655 (NLY35_04655) | 918265..918639 | + | 375 | WP_002934959.1 | DUF1149 family protein | - |
NLY35_RS04660 (NLY35_04660) | 918641..919492 | + | 852 | WP_015646868.1 | DegV family protein | - |
NLY35_RS04665 (NLY35_04665) | 919501..920268 | + | 768 | WP_024381818.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
NLY35_RS04670 (NLY35_04670) | 920265..921476 | + | 1212 | WP_202847695.1 | CCA tRNA nucleotidyltransferase | - |
NLY35_RS04675 (NLY35_04675) | 921469..923337 | + | 1869 | WP_105179850.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
NLY35_RS04680 (NLY35_04680) | 923338..923673 | + | 336 | WP_002934966.1 | hypothetical protein | - |
NLY35_RS04685 (NLY35_04685) | 923769..924728 | + | 960 | WP_023370402.1 | ROK family glucokinase | - |
NLY35_RS04690 (NLY35_04690) | 924854..925132 | + | 279 | WP_012775087.1 | hypothetical protein | - |
NLY35_RS04695 (NLY35_04695) | 925144..925446 | + | 303 | WP_202847696.1 | hypothetical protein | - |
NLY35_RS04700 (NLY35_04700) | 925499..926338 | + | 840 | WP_202847697.1 | thymidylate synthase | - |
NLY35_RS04705 (NLY35_04705) | 926680..927192 | + | 513 | WP_044683343.1 | dihydrofolate reductase | - |
NLY35_RS04710 (NLY35_04710) | 927390..928616 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
NLY35_RS04715 (NLY35_04715) | 928670..929257 | + | 588 | WP_002934975.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
NLY35_RS04720 (NLY35_04720) | 929280..929693 | + | 414 | WP_002934976.1 | nucleoside-diphosphate kinase | - |
NLY35_RS04725 (NLY35_04725) | 929789..931621 | + | 1833 | WP_002934977.1 | translation elongation factor 4 | - |
NLY35_RS04730 (NLY35_04730) | 931671..931853 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
NLY35_RS04735 (NLY35_04735) | 931988..933295 | + | 1308 | WP_002934980.1 | excalibur calcium-binding domain-containing protein | - |
NLY35_RS04740 (NLY35_04740) | 933357..933581 | + | 225 | WP_002934981.1 | hypothetical protein | - |
NLY35_RS04745 (NLY35_04745) | 933680..934261 | + | 582 | WP_002934983.1 | thymidine kinase | - |
NLY35_RS04750 (NLY35_04750) | 934542..935621 | + | 1080 | WP_002934984.1 | peptide chain release factor 1 | - |
NLY35_RS04755 (NLY35_04755) | 935621..936454 | + | 834 | WP_024417216.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
NLY35_RS04760 (NLY35_04760) | 936441..937049 | + | 609 | WP_009909811.1 | L-threonylcarbamoyladenylate synthase | - |
NLY35_RS04765 (NLY35_04765) | 937046..937477 | + | 432 | WP_009909813.1 | GNAT family N-acetyltransferase | - |
NLY35_RS04770 (NLY35_04770) | 937501..938760 | + | 1260 | WP_024417215.1 | serine hydroxymethyltransferase | - |
NLY35_RS04775 (NLY35_04775) | 938760..939734 | + | 975 | WP_204101711.1 | nucleoid-associated protein | - |
NLY35_RS04780 (NLY35_04780) | 939735..940334 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
NLY35_RS04785 (NLY35_04785) | 940435..941193 | + | 759 | WP_172057882.1 | SDR family NAD(P)-dependent oxidoreductase | - |
NLY35_RS04790 (NLY35_04790) | 941210..941962 | + | 753 | WP_172001154.1 | DUF6287 domain-containing protein | - |
NLY35_RS04795 (NLY35_04795) | 941959..942291 | + | 333 | WP_002934993.1 | HIRAN domain-containing protein | - |
NLY35_RS04800 (NLY35_04800) | 942312..943169 | - | 858 | WP_074390708.1 | hypothetical protein | - |
NLY35_RS04805 (NLY35_04805) | 943287..944075 | - | 789 | WP_172001155.1 | hypothetical protein | - |
NLY35_RS04810 (NLY35_04810) | 944276..945961 | + | 1686 | WP_254369419.1 | AAA family ATPase | - |
NLY35_RS04815 (NLY35_04815) | 945958..947007 | + | 1050 | WP_254369420.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
NLY35_RS04820 (NLY35_04820) | 947251..948561 | - | 1311 | WP_172001157.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
NLY35_RS04825 (NLY35_04825) | 948533..948766 | - | 234 | WP_105125817.1 | DUF3173 domain-containing protein | - |
NLY35_RS04830 (NLY35_04830) | 948744..949982 | - | 1239 | WP_172001158.1 | Rep family protein | - |
NLY35_RS04835 (NLY35_04835) | 950491..951015 | - | 525 | WP_105125815.1 | hypothetical protein | - |
NLY35_RS04840 (NLY35_04840) | 951041..951346 | - | 306 | WP_172001159.1 | hypothetical protein | - |
NLY35_RS04845 (NLY35_04845) | 951599..952900 | + | 1302 | WP_172001160.1 | hypothetical protein | - |
NLY35_RS04850 (NLY35_04850) | 952925..953131 | - | 207 | WP_044686483.1 | helix-turn-helix domain-containing protein | - |
NLY35_RS04855 (NLY35_04855) | 953248..954225 | + | 978 | WP_201343698.1 | hypothetical protein | - |
NLY35_RS04860 (NLY35_04860) | 954241..955080 | + | 840 | WP_105125811.1 | hypothetical protein | - |
NLY35_RS04865 (NLY35_04865) | 955097..955501 | + | 405 | WP_105125810.1 | hypothetical protein | - |
NLY35_RS04870 (NLY35_04870) | 955656..956678 | + | 1023 | WP_172001162.1 | hypothetical protein | - |
NLY35_RS04875 (NLY35_04875) | 956668..956937 | + | 270 | WP_226313379.1 | hypothetical protein | - |
NLY35_RS04880 (NLY35_04880) | 957010..958266 | + | 1257 | WP_254379780.1 | hypothetical protein | - |
NLY35_RS04885 (NLY35_04885) | 958496..960046 | - | 1551 | WP_002934999.1 | glutamine-hydrolyzing GMP synthase | - |
NLY35_RS04890 (NLY35_04890) | 960322..961020 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
NLY35_RS04895 (NLY35_04895) | 961124..961456 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
NLY35_RS04900 (NLY35_04900) | 961469..963043 | + | 1575 | WP_024417212.1 | signal recognition particle protein | - |
NLY35_RS04905 (NLY35_04905) | 963236..963904 | + | 669 | WP_024387747.1 | SatD family protein | - |
NLY35_RS04910 (NLY35_04910) | 963908..964648 | + | 741 | WP_024417211.1 | DUF3307 domain-containing protein | - |
NLY35_RS04915 (NLY35_04915) | 964841..966190 | + | 1350 | WP_204101623.1 | ATP-binding protein | - |
NLY35_RS04920 (NLY35_04920) | 966192..967433 | + | 1242 | WP_024417209.1 | serine/threonine-protein kinase | - |
NLY35_RS04925 (NLY35_04925) | 967565..968635 | + | 1071 | WP_014636926.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
NLY35_RS04930 (NLY35_04930) | 968705..970213 | - | 1509 | WP_172001163.1 | Phosphomannomutase/phosphoglucomutase | VF |
NLY35_RS04935 (NLY35_04935) | 970289..971230 | - | 942 | WP_024417207.1 | sensor histidine kinase | - |
NLY35_RS04940 (NLY35_04940) | 971227..971892 | - | 666 | WP_024405695.1 | Response regulator protein GraR | VF |
NLY35_RS04945 (NLY35_04945) | 971934..972200 | - | 267 | WP_024405694.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
NLY35_RS04950 (NLY35_04950) | 972184..972435 | - | 252 | WP_024417206.1 | DUF6290 family protein | Antitoxin Detail |
NLY35_RS04955 (NLY35_04955) | 972527..974497 | - | 1971 | WP_024417205.1 | ABC transporter permease | - |
NLY35_RS04960 (NLY35_04960) | 974498..975250 | - | 753 | WP_015646831.1 | ABC transporter ATP-binding protein YxdL | VF |
NLY35_RS04965 (NLY35_04965) | 975271..975648 | - | 378 | WP_011922413.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
NLY35_RS04970 (NLY35_04970) | 975661..975801 | - | 141 | WP_012775106.1 | hypothetical protein | - |
NLY35_RS04975 (NLY35_04975) | 975941..977107 | - | 1167 | WP_024417204.1 | ATP-grasp domain-containing protein | - |
NLY35_RS04980 (NLY35_04980) | 977125..977871 | - | 747 | WP_204101622.1 | alpha/beta hydrolase-fold protein | - |
NLY35_RS04985 (NLY35_04985) | 977902..978729 | - | 828 | WP_024417203.1 | alpha/beta hydrolase | - |
NLY35_RS04990 (NLY35_04990) | 978843..979163 | - | 321 | WP_226320097.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
NLY35_RS04995 (NLY35_04995) | 979120..979665 | - | 546 | WP_226313383.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
NLY35_RS05000 (NLY35_05000) | 979730..980566 | - | 837 | Protein_939 | AraC family transcriptional regulator | - |
NLY35_RS05005 (NLY35_05005) | 980643..981977 | - | 1335 | WP_204101621.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
NLY35_RS05010 (NLY35_05010) | 982173..982334 | - | 162 | WP_230334428.1 | HAD hydrolase-like protein | - |
NLY35_RS05015 (NLY35_05015) | 982324..982926 | - | 603 | WP_226317526.1 | HAD family hydrolase | - |
NLY35_RS05020 (NLY35_05020) | 983051..983416 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
NLY35_RS05025 (NLY35_05025) | 983482..983976 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
NLY35_RS05030 (NLY35_05030) | 984474..985427 | + | 954 | WP_024376800.1 | IS30 family transposase ISSpn8 | Transposase |
NLY35_RS05035 (NLY35_05035) | 985798..987891 | - | 2094 | WP_201343695.1 | type I DNA topoisomerase | - |
NLY35_RS05040 (NLY35_05040) | 987984..988826 | - | 843 | WP_024417184.1 | DNA-processing protein DprA | - |
NLY35_RS05045 (NLY35_05045) | 988887..989444 | - | 558 | WP_024417183.1 | Maltose O-acetyltransferase | VF |
NLY35_RS05050 (NLY35_05050) | 989455..989715 | - | 261 | WP_009909865.1 | metal-sensitive transcriptional regulator | - |
NLY35_RS05055 (NLY35_05055) | 989822..990145 | + | 324 | WP_024417182.1 | rhodanese-like domain-containing protein | - |
NLY35_RS05060 (NLY35_05060) | 990142..991794 | + | 1653 | WP_204101680.1 | FAD-dependent oxidoreductase | - |
NLY35_RS05065 (NLY35_05065) | 991902..992453 | + | 552 | WP_204101714.1 | DUF1836 domain-containing protein | - |
NLY35_RS05070 (NLY35_05070) | 992443..993093 | + | 651 | WP_002936498.1 | hypothetical protein | VF |
NLY35_RS05075 (NLY35_05075) | 993126..994136 | - | 1011 | WP_024417179.1 | YdcF family protein | - |
NLY35_RS05080 (NLY35_05080) | 994139..994912 | - | 774 | WP_024417178.1 | ribonuclease HII | - |
NLY35_RS05085 (NLY35_05085) | 994899..995750 | - | 852 | WP_014638943.1 | Ribosome biogenesis GTPase A | VF |
NLY35_RS05090 (NLY35_05090) | 995927..996394 | - | 468 | WP_014638944.1 | hypothetical protein | - |
NLY35_RS05095 (NLY35_05095) | 996476..996613 | - | 138 | Protein_958 | DNA-binding protein | - |
NLY35_RS05100 (NLY35_05100) | 996821..999760 | - | 2940 | WP_204101681.1 | glycoside hydrolase family 98 domain-containing protein | - |
NLY35_RS05105 (NLY35_05105) | 999902..1000795 | - | 894 | WP_204101682.1 | ROK family protein | - |
NLY35_RS05110 (NLY35_05110) | 1000797..1002674 | - | 1878 | WP_044666650.1 | alpha-N-acetylgalactosaminidase | - |
NLY35_RS05115 (NLY35_05115) | 1002664..1003998 | - | 1335 | WP_254369421.1 | alpha-L-fucosidase | - |
NLY35_RS05120 (NLY35_05120) | 1003995..1004834 | - | 840 | WP_172001168.1 | carbohydrate ABC transporter permease | - |
NLY35_RS05125 (NLY35_05125) | 1004845..1005765 | - | 921 | WP_004195666.1 | sugar ABC transporter permease | - |
NLY35_RS05130 (NLY35_05130) | 1005820..1007118 | - | 1299 | WP_172001169.1 | ABC transporter substrate-binding protein | - |
NLY35_RS05135 (NLY35_05135) | 1007135..1007773 | - | 639 | WP_024417171.1 | L-fuculose-phosphate aldolase | - |
NLY35_RS05140 (NLY35_05140) | 1007794..1009581 | - | 1788 | WP_029173302.1 | L-fucose isomerase | - |
NLY35_RS05145 (NLY35_05145) | 1009565..1010992 | - | 1428 | WP_172001171.1 | rhamnulokinase family protein | - |
NLY35_RS05150 (NLY35_05150) | 1011151..1011918 | + | 768 | WP_172001172.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
NLY35_RS05155 (NLY35_05155) | 1012887..1013375 | - | 489 | WP_024417166.1 | YkgJ family cysteine cluster protein | - |
NLY35_RS05160 (NLY35_05160) | 1013427..1014074 | - | 648 | WP_024417165.1 | Maf family protein | - |
NLY35_RS05165 (NLY35_05165) | 1014126..1016210 | - | 2085 | WP_032499130.1 | hypothetical protein | VF |
NLY35_RS05170 (NLY35_05170) | 1016530..1017786 | + | 1257 | WP_225533399.1 | IS110 family transposase ISSsu7 | Transposase |
NLY35_RS05175 (NLY35_05175) | 1018221..1019492 | - | 1272 | WP_044666688.1 | dihydroorotase | - |
NLY35_RS05180 (NLY35_05180) | 1019532..1020185 | - | 654 | WP_024417311.1 | uracil-DNA glycosylase | - |
NLY35_RS05185 (NLY35_05185) | 1020195..1021121 | - | 927 | WP_204101652.1 | Prophage bactoprenol glucosyl transferase | VF |
NLY35_RS05190 (NLY35_05190) | 1021230..1021862 | - | 633 | WP_202847708.1 | orotate phosphoribosyltransferase | - |
NLY35_RS05195 (NLY35_05195) | 1022000..1022327 | - | 328 | Protein_978 | inorganic diphosphatase | - |
NLY35_RS05200 (NLY35_05200) | 1022320..1023015 | - | 696 | WP_013730369.1 | orotidine-5'-phosphate decarboxylase | - |
NLY35_RS05205 (NLY35_05205) | 1023207..1024121 | - | 915 | WP_029743793.1 | dihydroorotate dehydrogenase | - |
NLY35_RS05210 (NLY35_05210) | 1024131..1024904 | - | 774 | WP_024417314.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
NLY35_RS05215 (NLY35_05215) | 1025119..1026030 | + | 912 | WP_012775137.1 | hypothetical protein | VF |
NLY35_RS05220 (NLY35_05220) | 1026193..1027320 | + | 1128 | WP_002935156.1 | glucose-1-phosphate adenylyltransferase | - |
NLY35_RS05225 (NLY35_05225) | 1027333..1028448 | + | 1116 | WP_011922501.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
NLY35_RS05230 (NLY35_05230) | 1028457..1029902 | + | 1446 | WP_002939565.1 | glycogen synthase GlgA | - |
NLY35_RS05235 (NLY35_05235) | 1029975..1031813 | + | 1839 | WP_172041562.1 | 1,4-alpha-glucan branching protein GlgB | - |
NLY35_RS05240 (NLY35_05240) | 1031941..1032741 | - | 801 | WP_172041561.1 | transporter substrate-binding domain-containing protein | - |
NLY35_RS05245 (NLY35_05245) | 1032913..1033725 | - | 813 | WP_162636985.1 | Arginine-binding extracellular protein ArtP | VF |
NLY35_RS05250 (NLY35_05250) | 1033923..1034390 | - | 468 | WP_013730375.1 | 8-oxo-dGTP diphosphatase | - |
NLY35_RS05255 (NLY35_05255) | 1034383..1034886 | - | 504 | WP_013730376.1 | GNAT family N-acetyltransferase | - |
NLY35_RS05260 (NLY35_05260) | 1034960..1039753 | - | 4794 | WP_230334431.1 | hypothetical protein | VF |
NLY35_RS05265 (NLY35_05265) | 1039977..1040981 | - | 1005 | WP_254369422.1 | Immunoglobulin A1 protease | VF |
NLY35_RS05270 (NLY35_05270) | 1041383..1043119 | - | 1737 | WP_226313418.1 | DUF2971 domain-containing protein | - |
NLY35_RS05275 (NLY35_05275) | 1043134..1045119 | - | 1986 | WP_172001255.1 | excinuclease ABC subunit UvrB | - |
NLY35_RS05280 (NLY35_05280) | 1045116..1045775 | - | 660 | WP_002935168.1 | hypothetical protein | - |
NLY35_RS05285 (NLY35_05285) | 1045976..1048174 | + | 2199 | WP_013730378.1 | ABC transporter substrate-binding protein/permease | - |
NLY35_RS05290 (NLY35_05290) | 1048174..1048914 | + | 741 | WP_013730379.1 | Arginine transport ATP-binding protein ArtM | VF |
NLY35_RS05295 (NLY35_05295) | 1048970..1049461 | - | 492 | WP_013730380.1 | GNAT family N-acetyltransferase | - |
NLY35_RS05300 (NLY35_05300) | 1049761..1051293 | + | 1533 | WP_009909906.1 | ATP-binding cassette domain-containing protein | - |
NLY35_RS05305 (NLY35_05305) | 1051371..1052651 | - | 1281 | WP_009909907.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
NLY35_RS05310 (NLY35_05310) | 1053011..1053151 | + | 141 | WP_014635984.1 | hypothetical protein | - |
NLY35_RS05315 (NLY35_05315) | 1053448..1053726 | - | 279 | WP_230334430.1 | hypothetical protein | - |
NLY35_RS05320 (NLY35_05320) | 1053762..1054067 | - | 306 | WP_226313420.1 | hypothetical protein | - |
NLY35_RS05325 (NLY35_05325) | 1054403..1055296 | - | 894 | WP_024381337.1 | aldose 1-epimerase family protein | - |
NLY35_RS05330 (NLY35_05330) | 1055361..1056767 | - | 1407 | WP_024383434.1 | 6-phospho-beta-galactosidase | - |
NLY35_RS05335 (NLY35_05335) | 1056838..1058517 | - | 1680 | WP_172001252.1 | lactose-specific PTS transporter subunit EIIC | - |
NLY35_RS05340 (NLY35_05340) | 1058517..1058834 | - | 318 | WP_172001251.1 | PTS lactose/cellobiose transporter subunit IIA | - |
NLY35_RS05345 (NLY35_05345) | 1059016..1059849 | - | 834 | WP_024381340.1 | PRD domain-containing protein | - |
NLY35_RS05350 (NLY35_05350) | 1060037..1061014 | - | 978 | WP_002935222.1 | tagatose-bisphosphate aldolase | - |
NLY35_RS05355 (NLY35_05355) | 1061016..1061948 | - | 933 | WP_204101651.1 | tagatose-6-phosphate kinase | - |
NLY35_RS05360 (NLY35_05360) | 1061958..1062473 | - | 516 | WP_024381342.1 | galactose-6-phosphate isomerase subunit LacB | - |
NLY35_RS05365 (NLY35_05365) | 1062500..1062922 | - | 423 | WP_024381343.1 | galactose-6-phosphate isomerase subunit LacA | - |
NLY35_RS05370 (NLY35_05370) | 1063128..1063895 | - | 768 | WP_024381344.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
NLY35_RS05375 (NLY35_05375) | 1064172..1064927 | + | 756 | WP_024394622.1 | hypothetical protein | - |
NLY35_RS05380 (NLY35_05380) | 1065016..1065204 | + | 189 | WP_002935229.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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