NZ_CP100418909360..1060600

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 151241 bp
Accession: NZ_CP100418        Location: 909360..1060600         Organism: Streptococcus suis strain STC104       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NLY35_RS04605 (NLY35_04605) 907779..908630 - 852 WP_024417221.1 NAD(P)H-hydrate dehydratase -
NLY35_RS04610 (NLY35_04610) 908728..909351 + 624 WP_012775083.1 endonuclease III -
NLY35_RS04615 (NLY35_04615) 909637..910620 + 984 WP_012775084.1 GMP reductase -
NLY35_RS04620 (NLY35_04620) 910690..912039 + 1350 Protein_863 MATE family efflux transporter -
NLY35_RS04625 (NLY35_04625) 912137..912655 + 519 WP_002934950.1 ribosome maturation factor RimM -
NLY35_RS04630 (NLY35_04630) 912645..913370 + 726 WP_002934953.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
NLY35_RS04635 (NLY35_04635) 913401..914456 + 1056 WP_002934954.1 histidinol-phosphate transaminase -
NLY35_RS04640 (NLY35_04640) 914560..915309 + 750 WP_009909780.1 DeoR/GlpR family DNA-binding transcription regulator -
NLY35_RS04645 (NLY35_04645) 915306..916217 + 912 WP_002934956.1 1-phosphofructokinase -
NLY35_RS04650 (NLY35_04650) 916214..918169 + 1956 WP_002934957.1 fructose-specific PTS transporter subunit EIIC -
NLY35_RS04655 (NLY35_04655) 918265..918639 + 375 WP_002934959.1 DUF1149 family protein -
NLY35_RS04660 (NLY35_04660) 918641..919492 + 852 WP_015646868.1 DegV family protein -
NLY35_RS04665 (NLY35_04665) 919501..920268 + 768 WP_024381818.1 4-hydroxy-tetrahydrodipicolinate reductase -
NLY35_RS04670 (NLY35_04670) 920265..921476 + 1212 WP_202847695.1 CCA tRNA nucleotidyltransferase -
NLY35_RS04675 (NLY35_04675) 921469..923337 + 1869 WP_105179850.1 ABC-F family ATP-binding cassette domain-containing protein -
NLY35_RS04680 (NLY35_04680) 923338..923673 + 336 WP_002934966.1 hypothetical protein -
NLY35_RS04685 (NLY35_04685) 923769..924728 + 960 WP_023370402.1 ROK family glucokinase -
NLY35_RS04690 (NLY35_04690) 924854..925132 + 279 WP_012775087.1 hypothetical protein -
NLY35_RS04695 (NLY35_04695) 925144..925446 + 303 WP_202847696.1 hypothetical protein -
NLY35_RS04700 (NLY35_04700) 925499..926338 + 840 WP_202847697.1 thymidylate synthase -
NLY35_RS04705 (NLY35_04705) 926680..927192 + 513 WP_044683343.1 dihydrofolate reductase -
NLY35_RS04710 (NLY35_04710) 927390..928616 + 1227 WP_002934974.1 ATP-dependent Clp protease ATP-binding subunit ClpX -
NLY35_RS04715 (NLY35_04715) 928670..929257 + 588 WP_002934975.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
NLY35_RS04720 (NLY35_04720) 929280..929693 + 414 WP_002934976.1 nucleoside-diphosphate kinase -
NLY35_RS04725 (NLY35_04725) 929789..931621 + 1833 WP_002934977.1 translation elongation factor 4 -
NLY35_RS04730 (NLY35_04730) 931671..931853 - 183 WP_002934978.1 4-oxalocrotonate tautomerase -
NLY35_RS04735 (NLY35_04735) 931988..933295 + 1308 WP_002934980.1 excalibur calcium-binding domain-containing protein -
NLY35_RS04740 (NLY35_04740) 933357..933581 + 225 WP_002934981.1 hypothetical protein -
NLY35_RS04745 (NLY35_04745) 933680..934261 + 582 WP_002934983.1 thymidine kinase -
NLY35_RS04750 (NLY35_04750) 934542..935621 + 1080 WP_002934984.1 peptide chain release factor 1 -
NLY35_RS04755 (NLY35_04755) 935621..936454 + 834 WP_024417216.1 peptide chain release factor N(5)-glutamine methyltransferase -
NLY35_RS04760 (NLY35_04760) 936441..937049 + 609 WP_009909811.1 L-threonylcarbamoyladenylate synthase -
NLY35_RS04765 (NLY35_04765) 937046..937477 + 432 WP_009909813.1 GNAT family N-acetyltransferase -
NLY35_RS04770 (NLY35_04770) 937501..938760 + 1260 WP_024417215.1 serine hydroxymethyltransferase -
NLY35_RS04775 (NLY35_04775) 938760..939734 + 975 WP_204101711.1 nucleoid-associated protein -
NLY35_RS04780 (NLY35_04780) 939735..940334 + 600 WP_002934990.1 lysozyme family protein -
NLY35_RS04785 (NLY35_04785) 940435..941193 + 759 WP_172057882.1 SDR family NAD(P)-dependent oxidoreductase -
NLY35_RS04790 (NLY35_04790) 941210..941962 + 753 WP_172001154.1 DUF6287 domain-containing protein -
NLY35_RS04795 (NLY35_04795) 941959..942291 + 333 WP_002934993.1 HIRAN domain-containing protein -
NLY35_RS04800 (NLY35_04800) 942312..943169 - 858 WP_074390708.1 hypothetical protein -
NLY35_RS04805 (NLY35_04805) 943287..944075 - 789 WP_172001155.1 hypothetical protein -
NLY35_RS04810 (NLY35_04810) 944276..945961 + 1686 WP_254369419.1 AAA family ATPase -
NLY35_RS04815 (NLY35_04815) 945958..947007 + 1050 WP_254369420.1 5-methylcytosine-specific restriction endonuclease system specificity protein McrC -
NLY35_RS04820 (NLY35_04820) 947251..948561 - 1311 WP_172001157.1 Tyrosine recombinase XerC ; Integrase Integrase
NLY35_RS04825 (NLY35_04825) 948533..948766 - 234 WP_105125817.1 DUF3173 domain-containing protein -
NLY35_RS04830 (NLY35_04830) 948744..949982 - 1239 WP_172001158.1 Rep family protein -
NLY35_RS04835 (NLY35_04835) 950491..951015 - 525 WP_105125815.1 hypothetical protein -
NLY35_RS04840 (NLY35_04840) 951041..951346 - 306 WP_172001159.1 hypothetical protein -
NLY35_RS04845 (NLY35_04845) 951599..952900 + 1302 WP_172001160.1 hypothetical protein -
NLY35_RS04850 (NLY35_04850) 952925..953131 - 207 WP_044686483.1 helix-turn-helix domain-containing protein -
NLY35_RS04855 (NLY35_04855) 953248..954225 + 978 WP_201343698.1 hypothetical protein -
NLY35_RS04860 (NLY35_04860) 954241..955080 + 840 WP_105125811.1 hypothetical protein -
NLY35_RS04865 (NLY35_04865) 955097..955501 + 405 WP_105125810.1 hypothetical protein -
NLY35_RS04870 (NLY35_04870) 955656..956678 + 1023 WP_172001162.1 hypothetical protein -
NLY35_RS04875 (NLY35_04875) 956668..956937 + 270 WP_226313379.1 hypothetical protein -
NLY35_RS04880 (NLY35_04880) 957010..958266 + 1257 WP_254379780.1 hypothetical protein -
NLY35_RS04885 (NLY35_04885) 958496..960046 - 1551 WP_002934999.1 glutamine-hydrolyzing GMP synthase -
NLY35_RS04890 (NLY35_04890) 960322..961020 + 699 WP_002943214.1 GntR family transcriptional regulator -
NLY35_RS04895 (NLY35_04895) 961124..961456 + 333 WP_002935001.1 putative DNA-binding protein -
NLY35_RS04900 (NLY35_04900) 961469..963043 + 1575 WP_024417212.1 signal recognition particle protein -
NLY35_RS04905 (NLY35_04905) 963236..963904 + 669 WP_024387747.1 SatD family protein -
NLY35_RS04910 (NLY35_04910) 963908..964648 + 741 WP_024417211.1 DUF3307 domain-containing protein -
NLY35_RS04915 (NLY35_04915) 964841..966190 + 1350 WP_204101623.1 ATP-binding protein -
NLY35_RS04920 (NLY35_04920) 966192..967433 + 1242 WP_024417209.1 serine/threonine-protein kinase -
NLY35_RS04925 (NLY35_04925) 967565..968635 + 1071 WP_014636926.1 Tyrosine recombinase XerS ; Integrase Integrase
NLY35_RS04930 (NLY35_04930) 968705..970213 - 1509 WP_172001163.1 Phosphomannomutase/phosphoglucomutase VF
NLY35_RS04935 (NLY35_04935) 970289..971230 - 942 WP_024417207.1 sensor histidine kinase -
NLY35_RS04940 (NLY35_04940) 971227..971892 - 666 WP_024405695.1 Response regulator protein GraR VF
NLY35_RS04945 (NLY35_04945) 971934..972200 - 267 WP_024405694.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
NLY35_RS04950 (NLY35_04950) 972184..972435 - 252 WP_024417206.1 DUF6290 family protein Antitoxin Detail
NLY35_RS04955 (NLY35_04955) 972527..974497 - 1971 WP_024417205.1 ABC transporter permease -
NLY35_RS04960 (NLY35_04960) 974498..975250 - 753 WP_015646831.1 ABC transporter ATP-binding protein YxdL VF
NLY35_RS04965 (NLY35_04965) 975271..975648 - 378 WP_011922413.1 NisI/SpaI family lantibiotic immunity lipoprotein -
NLY35_RS04970 (NLY35_04970) 975661..975801 - 141 WP_012775106.1 hypothetical protein -
NLY35_RS04975 (NLY35_04975) 975941..977107 - 1167 WP_024417204.1 ATP-grasp domain-containing protein -
NLY35_RS04980 (NLY35_04980) 977125..977871 - 747 WP_204101622.1 alpha/beta hydrolase-fold protein -
NLY35_RS04985 (NLY35_04985) 977902..978729 - 828 WP_024417203.1 alpha/beta hydrolase -
NLY35_RS04990 (NLY35_04990) 978843..979163 - 321 WP_226320097.1 crosslink repair DNA glycosylase YcaQ family protein -
NLY35_RS04995 (NLY35_04995) 979120..979665 - 546 WP_226313383.1 crosslink repair DNA glycosylase YcaQ family protein -
NLY35_RS05000 (NLY35_05000) 979730..980566 - 837 Protein_939 AraC family transcriptional regulator -
NLY35_RS05005 (NLY35_05005) 980643..981977 - 1335 WP_204101621.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -
NLY35_RS05010 (NLY35_05010) 982173..982334 - 162 WP_230334428.1 HAD hydrolase-like protein -
NLY35_RS05015 (NLY35_05015) 982324..982926 - 603 WP_226317526.1 HAD family hydrolase -
NLY35_RS05020 (NLY35_05020) 983051..983416 - 366 WP_002936483.1 50S ribosomal protein L7/L12 -
NLY35_RS05025 (NLY35_05025) 983482..983976 - 495 WP_002936486.1 50S ribosomal protein L10 -
NLY35_RS05030 (NLY35_05030) 984474..985427 + 954 WP_024376800.1 IS30 family transposase ISSpn8 Transposase
NLY35_RS05035 (NLY35_05035) 985798..987891 - 2094 WP_201343695.1 type I DNA topoisomerase -
NLY35_RS05040 (NLY35_05040) 987984..988826 - 843 WP_024417184.1 DNA-processing protein DprA -
NLY35_RS05045 (NLY35_05045) 988887..989444 - 558 WP_024417183.1 Maltose O-acetyltransferase VF
NLY35_RS05050 (NLY35_05050) 989455..989715 - 261 WP_009909865.1 metal-sensitive transcriptional regulator -
NLY35_RS05055 (NLY35_05055) 989822..990145 + 324 WP_024417182.1 rhodanese-like domain-containing protein -
NLY35_RS05060 (NLY35_05060) 990142..991794 + 1653 WP_204101680.1 FAD-dependent oxidoreductase -
NLY35_RS05065 (NLY35_05065) 991902..992453 + 552 WP_204101714.1 DUF1836 domain-containing protein -
NLY35_RS05070 (NLY35_05070) 992443..993093 + 651 WP_002936498.1 hypothetical protein VF
NLY35_RS05075 (NLY35_05075) 993126..994136 - 1011 WP_024417179.1 YdcF family protein -
NLY35_RS05080 (NLY35_05080) 994139..994912 - 774 WP_024417178.1 ribonuclease HII -
NLY35_RS05085 (NLY35_05085) 994899..995750 - 852 WP_014638943.1 Ribosome biogenesis GTPase A VF
NLY35_RS05090 (NLY35_05090) 995927..996394 - 468 WP_014638944.1 hypothetical protein -
NLY35_RS05095 (NLY35_05095) 996476..996613 - 138 Protein_958 DNA-binding protein -
NLY35_RS05100 (NLY35_05100) 996821..999760 - 2940 WP_204101681.1 glycoside hydrolase family 98 domain-containing protein -
NLY35_RS05105 (NLY35_05105) 999902..1000795 - 894 WP_204101682.1 ROK family protein -
NLY35_RS05110 (NLY35_05110) 1000797..1002674 - 1878 WP_044666650.1 alpha-N-acetylgalactosaminidase -
NLY35_RS05115 (NLY35_05115) 1002664..1003998 - 1335 WP_254369421.1 alpha-L-fucosidase -
NLY35_RS05120 (NLY35_05120) 1003995..1004834 - 840 WP_172001168.1 carbohydrate ABC transporter permease -
NLY35_RS05125 (NLY35_05125) 1004845..1005765 - 921 WP_004195666.1 sugar ABC transporter permease -
NLY35_RS05130 (NLY35_05130) 1005820..1007118 - 1299 WP_172001169.1 ABC transporter substrate-binding protein -
NLY35_RS05135 (NLY35_05135) 1007135..1007773 - 639 WP_024417171.1 L-fuculose-phosphate aldolase -
NLY35_RS05140 (NLY35_05140) 1007794..1009581 - 1788 WP_029173302.1 L-fucose isomerase -
NLY35_RS05145 (NLY35_05145) 1009565..1010992 - 1428 WP_172001171.1 rhamnulokinase family protein -
NLY35_RS05150 (NLY35_05150) 1011151..1011918 + 768 WP_172001172.1 DeoR/GlpR family DNA-binding transcription regulator -
NLY35_RS05155 (NLY35_05155) 1012887..1013375 - 489 WP_024417166.1 YkgJ family cysteine cluster protein -
NLY35_RS05160 (NLY35_05160) 1013427..1014074 - 648 WP_024417165.1 Maf family protein -
NLY35_RS05165 (NLY35_05165) 1014126..1016210 - 2085 WP_032499130.1 hypothetical protein VF
NLY35_RS05170 (NLY35_05170) 1016530..1017786 + 1257 WP_225533399.1 IS110 family transposase ISSsu7 Transposase
NLY35_RS05175 (NLY35_05175) 1018221..1019492 - 1272 WP_044666688.1 dihydroorotase -
NLY35_RS05180 (NLY35_05180) 1019532..1020185 - 654 WP_024417311.1 uracil-DNA glycosylase -
NLY35_RS05185 (NLY35_05185) 1020195..1021121 - 927 WP_204101652.1 Prophage bactoprenol glucosyl transferase VF
NLY35_RS05190 (NLY35_05190) 1021230..1021862 - 633 WP_202847708.1 orotate phosphoribosyltransferase -
NLY35_RS05195 (NLY35_05195) 1022000..1022327 - 328 Protein_978 inorganic diphosphatase -
NLY35_RS05200 (NLY35_05200) 1022320..1023015 - 696 WP_013730369.1 orotidine-5'-phosphate decarboxylase -
NLY35_RS05205 (NLY35_05205) 1023207..1024121 - 915 WP_029743793.1 dihydroorotate dehydrogenase -
NLY35_RS05210 (NLY35_05210) 1024131..1024904 - 774 WP_024417314.1 dihydroorotate dehydrogenase electron transfer subunit -
NLY35_RS05215 (NLY35_05215) 1025119..1026030 + 912 WP_012775137.1 hypothetical protein VF
NLY35_RS05220 (NLY35_05220) 1026193..1027320 + 1128 WP_002935156.1 glucose-1-phosphate adenylyltransferase -
NLY35_RS05225 (NLY35_05225) 1027333..1028448 + 1116 WP_011922501.1 glucose-1-phosphate adenylyltransferase subunit GlgD -
NLY35_RS05230 (NLY35_05230) 1028457..1029902 + 1446 WP_002939565.1 glycogen synthase GlgA -
NLY35_RS05235 (NLY35_05235) 1029975..1031813 + 1839 WP_172041562.1 1,4-alpha-glucan branching protein GlgB -
NLY35_RS05240 (NLY35_05240) 1031941..1032741 - 801 WP_172041561.1 transporter substrate-binding domain-containing protein -
NLY35_RS05245 (NLY35_05245) 1032913..1033725 - 813 WP_162636985.1 Arginine-binding extracellular protein ArtP VF
NLY35_RS05250 (NLY35_05250) 1033923..1034390 - 468 WP_013730375.1 8-oxo-dGTP diphosphatase -
NLY35_RS05255 (NLY35_05255) 1034383..1034886 - 504 WP_013730376.1 GNAT family N-acetyltransferase -
NLY35_RS05260 (NLY35_05260) 1034960..1039753 - 4794 WP_230334431.1 hypothetical protein VF
NLY35_RS05265 (NLY35_05265) 1039977..1040981 - 1005 WP_254369422.1 Immunoglobulin A1 protease VF
NLY35_RS05270 (NLY35_05270) 1041383..1043119 - 1737 WP_226313418.1 DUF2971 domain-containing protein -
NLY35_RS05275 (NLY35_05275) 1043134..1045119 - 1986 WP_172001255.1 excinuclease ABC subunit UvrB -
NLY35_RS05280 (NLY35_05280) 1045116..1045775 - 660 WP_002935168.1 hypothetical protein -
NLY35_RS05285 (NLY35_05285) 1045976..1048174 + 2199 WP_013730378.1 ABC transporter substrate-binding protein/permease -
NLY35_RS05290 (NLY35_05290) 1048174..1048914 + 741 WP_013730379.1 Arginine transport ATP-binding protein ArtM VF
NLY35_RS05295 (NLY35_05295) 1048970..1049461 - 492 WP_013730380.1 GNAT family N-acetyltransferase -
NLY35_RS05300 (NLY35_05300) 1049761..1051293 + 1533 WP_009909906.1 ATP-binding cassette domain-containing protein -
NLY35_RS05305 (NLY35_05305) 1051371..1052651 - 1281 WP_009909907.1 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase -
NLY35_RS05310 (NLY35_05310) 1053011..1053151 + 141 WP_014635984.1 hypothetical protein -
NLY35_RS05315 (NLY35_05315) 1053448..1053726 - 279 WP_230334430.1 hypothetical protein -
NLY35_RS05320 (NLY35_05320) 1053762..1054067 - 306 WP_226313420.1 hypothetical protein -
NLY35_RS05325 (NLY35_05325) 1054403..1055296 - 894 WP_024381337.1 aldose 1-epimerase family protein -
NLY35_RS05330 (NLY35_05330) 1055361..1056767 - 1407 WP_024383434.1 6-phospho-beta-galactosidase -
NLY35_RS05335 (NLY35_05335) 1056838..1058517 - 1680 WP_172001252.1 lactose-specific PTS transporter subunit EIIC -
NLY35_RS05340 (NLY35_05340) 1058517..1058834 - 318 WP_172001251.1 PTS lactose/cellobiose transporter subunit IIA -
NLY35_RS05345 (NLY35_05345) 1059016..1059849 - 834 WP_024381340.1 PRD domain-containing protein -
NLY35_RS05350 (NLY35_05350) 1060037..1061014 - 978 WP_002935222.1 tagatose-bisphosphate aldolase -
NLY35_RS05355 (NLY35_05355) 1061016..1061948 - 933 WP_204101651.1 tagatose-6-phosphate kinase -
NLY35_RS05360 (NLY35_05360) 1061958..1062473 - 516 WP_024381342.1 galactose-6-phosphate isomerase subunit LacB -
NLY35_RS05365 (NLY35_05365) 1062500..1062922 - 423 WP_024381343.1 galactose-6-phosphate isomerase subunit LacA -
NLY35_RS05370 (NLY35_05370) 1063128..1063895 - 768 WP_024381344.1 DeoR/GlpR family DNA-binding transcription regulator -
NLY35_RS05375 (NLY35_05375) 1064172..1064927 + 756 WP_024394622.1 hypothetical protein -
NLY35_RS05380 (NLY35_05380) 1065016..1065204 + 189 WP_002935229.1 helix-turn-helix domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance