Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RelE(toxin) |
| Location | 971934..972435 | Replicon | chromosome |
| Accession | NZ_CP100418 | ||
| Organism | Streptococcus suis strain STC104 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A0A0M9FF45 |
| Locus tag | NLY35_RS04945 | Protein ID | WP_024405694.1 |
| Coordinates | 971934..972200 (-) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | NLY35_RS04950 | Protein ID | WP_024417206.1 |
| Coordinates | 972184..972435 (-) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY35_RS04925 (NLY35_04925) | 967565..968635 | + | 1071 | WP_014636926.1 | tyrosine recombinase XerS | - |
| NLY35_RS04930 (NLY35_04930) | 968705..970213 | - | 1509 | WP_172001163.1 | phosphomannomutase/phosphoglucomutase | - |
| NLY35_RS04935 (NLY35_04935) | 970289..971230 | - | 942 | WP_024417207.1 | sensor histidine kinase | - |
| NLY35_RS04940 (NLY35_04940) | 971227..971892 | - | 666 | WP_024405695.1 | response regulator transcription factor | - |
| NLY35_RS04945 (NLY35_04945) | 971934..972200 | - | 267 | WP_024405694.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| NLY35_RS04950 (NLY35_04950) | 972184..972435 | - | 252 | WP_024417206.1 | DUF6290 family protein | Antitoxin |
| NLY35_RS04955 (NLY35_04955) | 972527..974497 | - | 1971 | WP_024417205.1 | ABC transporter permease | - |
| NLY35_RS04960 (NLY35_04960) | 974498..975250 | - | 753 | WP_015646831.1 | ATP-binding cassette domain-containing protein | - |
| NLY35_RS04965 (NLY35_04965) | 975271..975648 | - | 378 | WP_011922413.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NLY35_RS04970 (NLY35_04970) | 975661..975801 | - | 141 | WP_012775106.1 | hypothetical protein | - |
| NLY35_RS04975 (NLY35_04975) | 975941..977107 | - | 1167 | WP_024417204.1 | ATP-grasp domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Integrative and Conjugative Element | - | - | 909360..1060600 | 151240 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|