MGE detailed information
MGE type: Genomic_island MGE length: 32101 bp
Accession: NZ_CP100418 Location: 1271890..1303990 Organism: Streptococcus suis strain STC104 Replicon: chromosome
Accession: NZ_CP100418 Location: 1271890..1303990 Organism: Streptococcus suis strain STC104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY35_RS06320 (NLY35_06320) | 1267050..1268231 | - | 1182 | WP_024417253.1 | pyridoxal phosphate-dependent aminotransferase | - |
| NLY35_RS06325 (NLY35_06325) | 1268228..1268725 | - | 498 | WP_024417252.1 | DUF5590 domain-containing protein | - |
| NLY35_RS06330 (NLY35_06330) | 1269027..1269476 | + | 450 | WP_024383028.1 | MarR family transcriptional regulator | - |
| NLY35_RS06335 (NLY35_06335) | 1269539..1270084 | + | 546 | WP_002941732.1 | NADPH-dependent FMN reductase | - |
| NLY35_RS06340 (NLY35_06340) | 1270154..1271296 | - | 1143 | WP_172001209.1 | UDP-galactopyranose mutase | - |
| NLY35_RS06345 (NLY35_06345) | 1271522..1271784 | + | 263 | Protein_1205 | transposase family protein | - |
| NLY35_RS06350 (NLY35_06350) | 1271890..1273644 | - | 1755 | WP_105152463.1 | hypothetical protein ; Integrase | Integrase |
| NLY35_RS06355 (NLY35_06355) | 1274149..1274553 | - | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
| NLY35_RS06360 (NLY35_06360) | 1274821..1275537 | - | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| NLY35_RS06365 (NLY35_06365) | 1275660..1276346 | - | 687 | WP_001033677.1 | hypothetical protein | - |
| NLY35_RS06370 (NLY35_06370) | 1276324..1277061 | - | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
| NLY35_RS06375 (NLY35_06375) | 1277054..1277755 | - | 702 | WP_000452012.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| NLY35_RS06380 (NLY35_06380) | 1277945..1279288 | - | 1344 | WP_000977993.1 | HAMP domain-containing sensor histidine kinase | - |
| NLY35_RS06385 (NLY35_06385) | 1279266..1279964 | - | 699 | WP_000276751.1 | Sensory transduction protein regX3 | VF |
| NLY35_RS06390 (NLY35_06390) | 1280005..1281378 | - | 1374 | WP_204101665.1 | S8 family serine peptidase | - |
| NLY35_RS06395 (NLY35_06395) | 1281475..1283358 | - | 1884 | WP_000261812.1 | SAG1250 family conjugative relaxase | - |
| NLY35_RS06400 (NLY35_06400) | 1283345..1283710 | - | 366 | WP_000431640.1 | MobC family plasmid mobilization relaxosome protein | - |
| NLY35_RS06405 (NLY35_06405) | 1283713..1284075 | - | 363 | WP_000140674.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| NLY35_RS06410 (NLY35_06410) | 1284413..1286956 | - | 2544 | WP_254379776.1 | AAA family ATPase | - |
| NLY35_RS06415 (NLY35_06415) | 1286957..1287724 | - | 768 | WP_001235242.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| NLY35_RS06420 (NLY35_06420) | 1287724..1288200 | - | 477 | WP_000578719.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| NLY35_RS06425 (NLY35_06425) | 1288270..1288560 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| NLY35_RS06430 (NLY35_06430) | 1288611..1289000 | - | 390 | WP_000048066.1 | DUF5945 family protein | - |
| NLY35_RS06435 (NLY35_06435) | 1288997..1289224 | - | 228 | WP_000110922.1 | DUF5965 family protein | - |
| NLY35_RS06440 (NLY35_06440) | 1289252..1290352 | - | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
| NLY35_RS06445 (NLY35_06445) | 1290416..1292059 | - | 1644 | WP_004607528.1 | hypothetical protein ; Integrase | Integrase |
| NLY35_RS06450 (NLY35_06450) | 1292150..1293046 | + | 897 | WP_001809760.1 | ParA family protein | - |
| NLY35_RS06455 (NLY35_06455) | 1293117..1293332 | + | 216 | WP_002321610.1 | peptide-binding protein | - |
| NLY35_RS06460 (NLY35_06460) | 1293349..1293504 | + | 156 | Protein_1228 | antitoxin | - |
| NLY35_RS06465 (NLY35_06465) | 1293542..1294279 | + | 738 | WP_002321849.1 | rRNA adenine N-6-methyltransferase | ARG |
| NLY35_RS06470 (NLY35_06470) | 1294449..1294709 | + | 261 | Protein_1230 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| NLY35_RS06475 (NLY35_06475) | 1294723..1294899 | - | 177 | WP_002935078.1 | hypothetical protein | - |
| NLY35_RS06480 (NLY35_06480) | 1294954..1295217 | - | 264 | WP_000253176.1 | hypothetical protein | - |
| NLY35_RS06485 (NLY35_06485) | 1295217..1295447 | - | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| NLY35_RS06490 (NLY35_06490) | 1295493..1296347 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| NLY35_RS06495 (NLY35_06495) | 1296356..1297321 | - | 966 | WP_001820668.1 | MobV family relaxase | - |
| NLY35_RS06500 (NLY35_06500) | 1297846..1298871 | - | 1026 | WP_014636623.1 | AAA family ATPase | - |
| NLY35_RS06505 (NLY35_06505) | 1299123..1299239 | - | 117 | Protein_1237 | RNA polymerase subunit sigma | - |
| NLY35_RS06510 (NLY35_06510) | 1299330..1299500 | - | 171 | WP_000331638.1 | hypothetical protein | - |
| NLY35_RS06515 (NLY35_06515) | 1299584..1300009 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| NLY35_RS06520 (NLY35_06520) | 1300104..1300616 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| NLY35_RS06525 (NLY35_06525) | 1301105..1301275 | - | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| NLY35_RS06530 (NLY35_06530) | 1301330..1303249 | - | 1920 | WP_201308469.1 | tetracycline resistance ribosomal protection protein Tet(O) | VF |
| NLY35_RS06535 (NLY35_06535) | 1303616..1303990 | - | 375 | WP_001129922.1 | TnpV protein | - |
| NLY35_RS06540 (NLY35_06540) | 1303930..1304661 | - | 732 | WP_000933067.1 | hypothetical protein | - |
| NLY35_RS06545 (NLY35_06545) | 1304756..1305046 | - | 291 | WP_000893083.1 | DUF5966 family protein | - |
| NLY35_RS06550 (NLY35_06550) | 1305060..1305359 | - | 300 | WP_000169469.1 | DUF5962 family protein | - |
| NLY35_RS06555 (NLY35_06555) | 1305430..1306377 | - | 948 | Protein_1247 | helicase | - |
| NLY35_RS06560 (NLY35_06560) | 1306482..1308293 | - | 1812 | WP_204101699.1 | group II intron reverse transcriptase/maturase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|