MGE detailed information
MGE type: Prophage MGE length: 103385 bp
Accession: NZ_CP100300 Location: 5606145..5709529 Organism: Burkholderia glumae strain BGR81S Replicon: chromosome
Accession: NZ_CP100300 Location: 5606145..5709529 Organism: Burkholderia glumae strain BGR81S Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY08_RS24745 | 5601498..5603867 | + | 2370 | WP_015876630.1 | EAL domain-containing protein | - |
| NIY08_RS24750 | 5604137..5605339 | + | 1203 | WP_015876631.1 | chromate transporter | - |
| NIY08_RS24755 | 5605425..5605883 | - | 459 | WP_015876632.1 | CopD family protein | - |
| NIY08_RS24760 | 5606145..5608469 | - | 2325 | WP_015876633.1 | DNA topoisomerase IV subunit A | - |
| NIY08_RS24765 | 5608543..5610525 | - | 1983 | WP_015876634.1 | DNA topoisomerase IV subunit B | - |
| NIY08_RS24770 | 5610727..5612694 | - | 1968 | WP_015876635.1 | ATP-binding cassette domain-containing protein | - |
| NIY08_RS24775 | 5612900..5613310 | - | 411 | WP_015876636.1 | DUF4399 domain-containing protein | - |
| NIY08_RS24780 | 5614858..5615781 | + | 924 | WP_015876637.1 | hypothetical protein | - |
| NIY08_RS24785 | 5615969..5617474 | + | 1506 | WP_012732721.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIY08_RS24790 | 5617467..5618264 | + | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIY08_RS24795 | 5618340..5618744 | + | 405 | WP_015876638.1 | PAAR domain-containing protein | - |
| NIY08_RS24800 | 5618749..5619252 | + | 504 | WP_042967740.1 | DUF4123 domain-containing protein | - |
| NIY08_RS24805 | 5619245..5619724 | + | 480 | WP_015876640.1 | hypothetical protein | - |
| NIY08_RS24810 | 5619609..5620202 | + | 594 | WP_232252298.1 | restriction endonuclease fold toxin 5 domain-containing protein | - |
| NIY08_RS24815 | 5620205..5620912 | + | 708 | WP_015876642.1 | immunity 52 family protein | - |
| NIY08_RS24820 | 5621363..5622148 | - | 786 | WP_015876644.1 | DNA adenine methylase | - |
| NIY08_RS24825 | 5622310..5622933 | - | 624 | WP_042967285.1 | hypothetical protein | - |
| NIY08_RS24830 | 5622936..5623502 | - | 567 | WP_015876646.1 | glycosyl hydrolase 108 family protein | - |
| NIY08_RS24835 | 5623499..5623948 | - | 450 | WP_017432368.1 | hypothetical protein | - |
| NIY08_RS24840 | 5624021..5625070 | - | 1050 | WP_015876647.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| NIY08_RS24845 | 5625080..5625286 | - | 207 | WP_015876648.1 | tail protein X | - |
| NIY08_RS24850 | 5625261..5626139 | - | 879 | WP_015876649.1 | phage tail protein | - |
| NIY08_RS24855 | 5626149..5626280 | - | 132 | WP_257739405.1 | hypothetical protein | - |
| NIY08_RS24860 | 5626470..5627275 | + | 806 | WP_085962370.1 | IS5 family transposase | - |
| NIY08_RS24865 | 5627272..5629446 | - | 2175 | WP_015876650.1 | phage tail tape measure protein | - |
| NIY08_RS24870 | 5629528..5629830 | - | 303 | WP_015876651.1 | phage tail assembly protein | - |
| NIY08_RS24875 | 5629912..5630415 | - | 504 | WP_015876652.1 | phage major tail tube protein | - |
| NIY08_RS24880 | 5630425..5631594 | - | 1170 | WP_015876653.1 | phage tail sheath family protein | - |
| NIY08_RS24885 | 5631666..5632388 | - | 723 | WP_015876654.1 | tail assembly chaperone | - |
| NIY08_RS24890 | 5632402..5634414 | - | 2013 | WP_015876655.1 | phage tail protein | - |
| NIY08_RS24895 | 5634402..5634980 | - | 579 | WP_015876656.1 | phage tail protein I | - |
| NIY08_RS24900 | 5634970..5635866 | - | 897 | WP_015876657.1 | baseplate J/gp47 family protein | - |
| NIY08_RS24905 | 5635863..5636195 | - | 333 | WP_015876658.1 | GPW/gp25 family protein | - |
| NIY08_RS24910 | 5636192..5636389 | - | 198 | WP_015876659.1 | hypothetical protein | - |
| NIY08_RS24915 | 5636457..5637194 | - | 738 | WP_015876660.1 | hypothetical protein | - |
| NIY08_RS24920 | 5637300..5637980 | - | 681 | WP_015876661.1 | phage baseplate assembly protein V | - |
| NIY08_RS24925 | 5637977..5638507 | - | 531 | WP_015876662.1 | hypothetical protein | - |
| NIY08_RS24930 | 5638497..5639027 | - | 531 | WP_015876663.1 | phage tail protein | - |
| NIY08_RS24935 | 5639031..5639321 | - | 291 | WP_015876664.1 | hypothetical protein | - |
| NIY08_RS24940 | 5639323..5640318 | - | 996 | Protein_4910 | major capsid protein | - |
| NIY08_RS24945 | 5640395..5640739 | - | 345 | WP_015876665.1 | head decoration protein | - |
| NIY08_RS24950 | 5640769..5641869 | - | 1101 | WP_015876666.1 | Clp protease ClpP | - |
| NIY08_RS24955 | 5641866..5643356 | - | 1491 | WP_015876667.1 | phage portal protein | - |
| NIY08_RS24960 | 5643353..5643559 | - | 207 | WP_013698685.1 | hypothetical protein | - |
| NIY08_RS24965 | 5643570..5645588 | - | 2019 | WP_080569335.1 | phage terminase large subunit family protein | - |
| NIY08_RS24970 | 5645551..5646120 | - | 570 | WP_015876669.1 | hypothetical protein | - |
| NIY08_RS24975 | 5646675..5647448 | - | 774 | WP_015876670.1 | zinc finger-like domain-containing protein | - |
| NIY08_RS24980 | 5647667..5650168 | - | 2502 | WP_015876671.1 | VapE family protein | - |
| NIY08_RS24985 | 5650327..5650710 | - | 384 | WP_013698691.1 | hypothetical protein | - |
| NIY08_RS24990 | 5650697..5651239 | - | 543 | WP_193373179.1 | hypothetical protein | - |
| NIY08_RS24995 | 5651665..5652168 | + | 504 | WP_015876673.1 | helix-turn-helix transcriptional regulator | - |
| NIY08_RS25000 | 5652122..5652637 | + | 516 | WP_050811421.1 | hypothetical protein | - |
| NIY08_RS25005 | 5652742..5652960 | + | 219 | WP_080569337.1 | hypothetical protein | - |
| NIY08_RS25010 | 5653010..5653372 | + | 363 | WP_042967260.1 | hypothetical protein | - |
| NIY08_RS25015 | 5653372..5654748 | + | 1377 | WP_015876675.1 | hypothetical protein | - |
| NIY08_RS25020 | 5654745..5655116 | + | 372 | WP_015876676.1 | hypothetical protein | - |
| NIY08_RS25025 | 5655202..5655693 | + | 492 | WP_017432301.1 | hypothetical protein | - |
| NIY08_RS25030 | 5655738..5655920 | + | 183 | WP_237711011.1 | hypothetical protein | - |
| NIY08_RS25035 | 5656093..5656269 | - | 177 | WP_017432303.1 | hypothetical protein | - |
| NIY08_RS25040 | 5656494..5657354 | + | 861 | WP_015876678.1 | conjugal transfer protein TraN | - |
| NIY08_RS25045 | 5657364..5658464 | - | 1101 | WP_015876679.1 | hypothetical protein ; Integrase | Integrase |
| NIY08_RS25055 | 5658937..5660136 | + | 1200 | WP_153477297.1 | Prophage integrase IntA ; Integrase | Integrase |
| NIY08_RS25060 | 5660570..5661175 | - | 606 | WP_124837013.1 | thioesterase domain-containing protein | - |
| NIY08_RS25065 | 5661172..5661648 | - | 477 | WP_257834614.1 | hypothetical protein | - |
| NIY08_RS25070 | 5661719..5662090 | - | 372 | WP_251118894.1 | hypothetical protein | - |
| NIY08_RS25075 | 5662094..5662618 | - | 525 | WP_251118895.1 | hypothetical protein | - |
| NIY08_RS25080 | 5662720..5663793 | + | 1074 | WP_251118896.1 | DUF4325 domain-containing protein | - |
| NIY08_RS25085 | 5663814..5664380 | - | 567 | WP_254983842.1 | lysozyme | - |
| NIY08_RS25090 | 5664377..5664874 | - | 498 | WP_155297007.1 | hypothetical protein | - |
| NIY08_RS25095 | 5664935..5666890 | - | 1956 | WP_257803393.1 | glycoside hydrolase family 55 protein | - |
| NIY08_RS25100 | 5666903..5667127 | - | 225 | WP_257803395.1 | hypothetical protein | - |
| NIY08_RS25105 | 5667140..5668036 | - | 897 | WP_257818515.1 | hypothetical protein | - |
| NIY08_RS25110 | 5668055..5668696 | - | 642 | WP_017922279.1 | DUF2313 domain-containing protein | - |
| NIY08_RS25115 | 5668697..5669854 | - | 1158 | WP_039202772.1 | baseplate J/gp47 family protein | - |
| NIY08_RS25120 | 5669854..5670243 | - | 390 | WP_257818517.1 | phage GP46 family protein | - |
| NIY08_RS25125 | 5670358..5670981 | - | 624 | WP_017922276.1 | phage baseplate assembly protein V | - |
| NIY08_RS25130 | 5670978..5672132 | - | 1155 | WP_257834618.1 | Mu P family protein | - |
| NIY08_RS25135 | 5672129..5673559 | - | 1431 | WP_039202778.1 | DNA circularization N-terminal domain-containing protein | - |
| NIY08_RS25140 | 5673570..5675465 | - | 1896 | WP_039202780.1 | hypothetical protein | - |
| NIY08_RS25145 | 5675610..5675948 | - | 339 | WP_039202781.1 | phage tail assembly protein | - |
| NIY08_RS25150 | 5675959..5676330 | - | 372 | WP_017922270.1 | phage tail tube protein | - |
| NIY08_RS25155 | 5676394..5677878 | - | 1485 | WP_257755352.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NIY08_RS25160 | 5677875..5678075 | - | 201 | WP_017922268.1 | DUF2635 domain-containing protein | - |
| NIY08_RS25165 | 5678085..5678648 | - | 564 | WP_155296963.1 | ATP-binding protein | - |
| NIY08_RS25170 | 5678648..5678968 | - | 321 | WP_017922266.1 | hypothetical protein | - |
| NIY08_RS25175 | 5678970..5679233 | - | 264 | WP_039201369.1 | hypothetical protein | - |
| NIY08_RS25180 | 5679233..5680300 | - | 1068 | WP_017922264.1 | major capsid protein | - |
| NIY08_RS25185 | 5680382..5681059 | - | 678 | WP_052231206.1 | head decoration protein | - |
| NIY08_RS25190 | 5681099..5681716 | - | 618 | WP_155296964.1 | hypothetical protein | - |
| NIY08_RS25195 | 5681735..5682625 | - | 891 | WP_017922261.1 | S49 family peptidase | - |
| NIY08_RS25200 | 5682625..5684256 | - | 1632 | WP_017922260.1 | phage portal protein | - |
| NIY08_RS25205 | 5684256..5684504 | - | 249 | WP_039201402.1 | gpW family head-tail joining protein | - |
| NIY08_RS25210 | 5684521..5686593 | - | 2073 | WP_257755350.1 | phage terminase large subunit family protein | - |
| NIY08_RS25215 | 5686646..5687350 | - | 705 | WP_251107513.1 | hypothetical protein | - |
| NIY08_RS25220 | 5687400..5687675 | - | 276 | WP_257834622.1 | DUF2591 domain-containing protein | - |
| NIY08_RS25225 | 5687681..5688379 | - | 699 | WP_257834624.1 | hypothetical protein | - |
| NIY08_RS25230 | 5688452..5688634 | + | 183 | WP_017922254.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NIY08_RS25235 | 5688661..5689056 | + | 396 | WP_017922253.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NIY08_RS25240 | 5689353..5689784 | - | 432 | WP_157384052.1 | hypothetical protein | - |
| NIY08_RS25245 | 5689777..5690340 | - | 564 | WP_257834627.1 | hypothetical protein | - |
| NIY08_RS25250 | 5690508..5690828 | - | 321 | WP_124837795.1 | hypothetical protein | - |
| NIY08_RS25255 | 5690856..5692655 | - | 1800 | WP_124837793.1 | toprim domain-containing protein | - |
| NIY08_RS25260 | 5692652..5693104 | - | 453 | WP_051415274.1 | HNH endonuclease signature motif containing protein | - |
| NIY08_RS25265 | 5693101..5693982 | - | 882 | WP_257756926.1 | hypothetical protein | - |
| NIY08_RS25270 | 5694344..5694541 | - | 198 | WP_257756927.1 | hypothetical protein | - |
| NIY08_RS25275 | 5694816..5695073 | - | 258 | WP_257818538.1 | transcriptional regulator | - |
| NIY08_RS25280 | 5695425..5695976 | - | 552 | WP_257834630.1 | hypothetical protein | - |
| NIY08_RS25285 | 5696467..5696988 | - | 522 | WP_257818542.1 | hypothetical protein | - |
| NIY08_RS25290 | 5696981..5697343 | - | 363 | WP_254983879.1 | hypothetical protein | - |
| NIY08_RS25295 | 5697646..5698254 | - | 609 | WP_257818545.1 | hypothetical protein | - |
| NIY08_RS25300 | 5698637..5699110 | - | 474 | WP_257834632.1 | AlpA family phage regulatory protein | - |
| NIY08_RS25305 | 5699273..5700871 | + | 1599 | WP_257834633.1 | anti-phage dCTP deaminase | - |
| NIY08_RS25310 | 5700816..5701013 | + | 198 | WP_257834634.1 | hypothetical protein | - |
| NIY08_RS25315 | 5701514..5702770 | + | 1257 | WP_017423782.1 | IS21 family transposase ISBcen28 | Transposase |
| NIY08_RS25320 | 5702767..5703633 | + | 867 | WP_257813470.1 | IS21 family transposase ISBcen28 | Transposase |
| NIY08_RS25325 | 5704267..5704818 | - | 552 | WP_257818554.1 | hypothetical protein | - |
| NIY08_RS25330 | 5706102..5706499 | + | 398 | Protein_4987 | hypothetical protein ; Integrase | Integrase |
| NIY08_RS25335 | 5707009..5707848 | + | 840 | WP_015876680.1 | hypothetical protein | - |
| NIY08_RS25340 | 5707852..5708145 | + | 294 | WP_015876681.1 | contact-dependent growth inhibition system immunity protein | - |
| NIY08_RS25345 | 5708486..5709529 | + | 1044 | Protein_4990 | IS3 family transposase | - |
| NIY08_RS25350 | 5710110..5711735 | + | 1626 | WP_186279026.1 | hypothetical protein | - |
| NIY08_RS25355 | 5712256..5713821 | + | 1566 | WP_230674428.1 | ABC transporter substrate-binding protein | - |
| NIY08_RS25360 | 5713919..5714359 | - | 441 | WP_017433130.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|