MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152564 bp
Accession: NZ_CP100294 Location: 1..152564 Organism: Burkholderia glumae strain R2 Replicon: plasmid pr22p
Accession: NZ_CP100294 Location: 1..152564 Organism: Burkholderia glumae strain R2 Replicon: plasmid pr22p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIX97_RS29420 | 101..772 | + | 672 | WP_012734035.1 | AAA family ATPase | - |
| NIX97_RS29425 | 772..1737 | + | 966 | WP_012734036.1 | ParB/RepB/Spo0J family partition protein | - |
| NIX97_RS29430 | 2492..3349 | + | 858 | WP_012734037.1 | plasmid replication initiator TrfA | - |
| NIX97_RS29435 | 5030..5929 | - | 900 | WP_017432353.1 | Crp/Fnr family transcriptional regulator | - |
| NIX97_RS29440 | 6347..6967 | - | 621 | WP_257804691.1 | DUF1173 domain-containing protein | - |
| NIX97_RS29445 | 7002..8087 | - | 1086 | Protein_5 | type IV secretion system DNA-binding domain-containing protein | - |
| NIX97_RS29450 | 8020..8448 | - | 429 | WP_257804717.1 | DUF3560 domain-containing protein | - |
| NIX97_RS29455 | 9055..9753 | + | 699 | WP_251119199.1 | hypothetical protein | - |
| NIX97_RS29460 | 9753..10139 | + | 387 | WP_251119200.1 | hypothetical protein | - |
| NIX97_RS29465 | 10408..11223 | + | 816 | WP_257804695.1 | IS5 family transposase ISBugl2 | Transposase |
| NIX97_RS29470 | 11486..12277 | - | 792 | WP_257804696.1 | winged helix-turn-helix domain-containing protein | - |
| NIX97_RS29475 | 12302..12664 | - | 363 | WP_169511683.1 | antibiotic biosynthesis monooxygenase | - |
| NIX97_RS29480 | 12661..12990 | - | 330 | WP_251119215.1 | NIPSNAP family protein | - |
| NIX97_RS29485 | 13284..13799 | + | 516 | WP_232483995.1 | GNAT family N-acetyltransferase | - |
| NIX97_RS29490 | 14057..14320 | - | 264 | WP_017432678.1 | hypothetical protein | - |
| NIX97_RS29495 | 14329..14652 | - | 324 | WP_080630273.1 | DNA-binding protein Bv3F | VF |
| NIX97_RS29500 | 14788..16152 | + | 1365 | Protein_16 | error-prone DNA polymerase | - |
| NIX97_RS29505 | 16177..16314 | + | 138 | WP_155297067.1 | hypothetical protein | - |
| NIX97_RS29515 | 17501..18967 | + | 1467 | WP_039203994.1 | 3'-5' exonuclease | - |
| NIX97_RS29520 | 19025..19492 | + | 468 | Protein_20 | IS5 family transposase IS1421 | Transposase |
| NIX97_RS29525 | 19499..21964 | - | 2466 | WP_012732758.1 | Acetyl esterase | VF |
| NIX97_RS29530 | 21951..23651 | - | 1701 | WP_251119220.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| NIX97_RS29535 | 23678..25099 | - | 1422 | WP_012732756.1 | coniferyl aldehyde dehydrogenase | - |
| NIX97_RS29540 | 25244..26296 | + | 1053 | WP_012732755.1 | AraC family transcriptional regulator | - |
| NIX97_RS29545 | 26525..27001 | + | 477 | WP_153479231.1 | IS66 family transposase ISRm2 | Transposase |
| NIX97_RS29550 | 27090..27326 | + | 237 | WP_080763709.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX97_RS29555 | 27358..28914 | + | 1557 | WP_257804705.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX97_RS29560 | 28836..29174 | + | 339 | Protein_28 | IS6 family transposase ISApr5 | Transposase |
| NIX97_RS29565 | 29305..29556 | - | 252 | WP_012735336.1 | hypothetical protein | VF |
| NIX97_RS29570 | 29569..30105 | - | 537 | WP_017924909.1 | hypothetical protein | - |
| NIX97_RS29575 | 30113..33016 | - | 2904 | WP_039203085.1 | SH3 domain-containing protein | - |
| NIX97_RS29580 | 33069..35576 | - | 2508 | WP_039203083.1 | type VI secretion system Vgr family protein | - |
| NIX97_RS29585 | 35983..36666 | - | 684 | WP_169511702.1 | IS6 family transposase ISDge13 | Transposase |
| NIX97_RS29590 | 36882..37091 | - | 210 | WP_017925019.1 | hypothetical protein | - |
| NIX97_RS29595 | 37134..38957 | - | 1824 | WP_039203972.1 | site-specific integrase | - |
| NIX97_RS29600 | 38954..39334 | - | 381 | WP_080763664.1 | hypothetical protein | - |
| NIX97_RS29605 | 39369..39686 | - | 318 | WP_017925051.1 | hypothetical protein | - |
| NIX97_RS29610 | 39749..40159 | - | 411 | WP_039203971.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIX97_RS29615 | 40150..40404 | - | 255 | WP_012734091.1 | antitoxin | - |
| NIX97_RS29620 | 41270..42075 | + | 806 | WP_085962450.1 | IS5 family transposase IS1421 | Transposase |
| NIX97_RS29625 | 42222..43004 | - | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| NIX97_RS29630 | 43107..43766 | + | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| NIX97_RS29635 | 43902..44523 | + | 622 | Protein_43 | DDE-type integrase/transposase/recombinase | - |
| NIX97_RS29640 | 44828..46375 | + | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| NIX97_RS29645 | 46735..47235 | + | 501 | WP_012734085.1 | hypothetical protein | VF |
| NIX97_RS29650 | 47433..47720 | + | 288 | WP_017924497.1 | hypothetical protein | - |
| NIX97_RS29655 | 47913..48203 | + | 291 | WP_230674603.1 | DDE-type integrase/transposase/recombinase | - |
| NIX97_RS29660 | 48462..48602 | - | 141 | WP_080569432.1 | integrase | - |
| NIX97_RS29665 | 48665..49196 | - | 532 | Protein_49 | IS3 family transposase ISBvi3 | Transposase |
| NIX97_RS29670 | 49318..49497 | + | 180 | Protein_50 | hypothetical protein | - |
| NIX97_RS29680 | 50456..52303 | - | 1848 | WP_012734082.1 | clostripain-related cysteine peptidase | - |
| NIX97_RS29685 | 52399..53886 | - | 1488 | WP_124837819.1 | hypothetical protein | - |
| NIX97_RS29690 | 54560..55363 | - | 804 | Protein_54 | IS5 family transposase | - |
| NIX97_RS29695 | 55578..56315 | + | 738 | WP_257804719.1 | Regulator of RpoS | VF |
| NIX97_RS29700 | 56535..57314 | + | 780 | WP_012734079.1 | Sensor histidine kinase RcsC | VF |
| NIX97_RS29705 | 57464..59998 | + | 2535 | WP_257804714.1 | Sensor histidine kinase RcsC | VF |
| NIX97_RS29710 | 60030..60362 | - | 333 | Protein_58 | IS3 family transposase IS1416 | Transposase |
| NIX97_RS29720 | 61306..62862 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX97_RS29725 | 62894..63244 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX97_RS29730 | 63220..63696 | - | 477 | WP_039203908.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX97_RS29735 | 63786..64485 | - | 700 | Protein_63 | IS3 family transposase | - |
| NIX97_RS30955 | 64585..66144 | - | 1560 | WP_276585515.1 | Aerotaxis receptor | VF |
| NIX97_RS29750 | 66993..67374 | + | 382 | Protein_65 | transposase | - |
| NIX97_RS29755 | 67701..68189 | - | 489 | WP_080569430.1 | hypothetical protein | - |
| NIX97_RS29760 | 68408..70132 | - | 1725 | WP_039204250.1 | Methyl-accepting chemotaxis protein I | VF |
| NIX97_RS29765 | 70308..72005 | - | 1698 | WP_012732723.1 | hypothetical protein | VF |
| NIX97_RS29770 | 72045..72389 | - | 345 | WP_017432531.1 | hypothetical protein | - |
| NIX97_RS29775 | 72872..74455 | + | 1584 | WP_012732724.1 | hypothetical protein | VF |
| NIX97_RS29780 | 74579..75677 | - | 1099 | Protein_71 | tyrosine-type recombinase/integrase | - |
| NIX97_RS29785 | 75973..76569 | - | 597 | WP_236577948.1 | HD-GYP domain-containing protein | - |
| NIX97_RS29795 | 77889..78749 | + | 861 | Protein_74 | IS110 family transposase IS884 | Transposase |
| NIX97_RS29800 | 78783..80019 | - | 1237 | Protein_75 | IS3-like element IS1416 family transposase | - |
| NIX97_RS29805 | 80071..80232 | + | 162 | Protein_76 | IS110 family transposase | - |
| NIX97_RS29810 | 80591..81886 | - | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NIX97_RS29815 | 82036..82302 | + | 267 | Protein_78 | IS1182 family transposase ISThsp18 | Transposase |
| NIX97_RS29820 | 82418..83233 | - | 816 | WP_035976812.1 | sulfotransferase | - |
| NIX97_RS29825 | 83306..83989 | - | 684 | WP_012734068.1 | Adenylyl-sulfate kinase | VF |
| NIX97_RS29830 | 84986..85198 | + | 213 | Protein_81 | phage integrase family protein | - |
| NIX97_RS29835 | 85698..86360 | + | 663 | Protein_82 | IS91 family transposase ISAzo26 | Transposase |
| NIX97_RS29840 | 86412..87736 | - | 1325 | Protein_83 | IS21 family transposase | - |
| NIX97_RS29845 | 87851..88021 | + | 171 | Protein_84 | ATP-binding protein | - |
| NIX97_RS29850 | 88647..88841 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIX97_RS29855 | 88911..89213 | - | 303 | WP_124837730.1 | hypothetical protein | - |
| NIX97_RS29860 | 89277..89519 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| NIX97_RS29865 | 89532..89795 | - | 264 | WP_017433216.1 | hypothetical protein | - |
| NIX97_RS29870 | 89807..90127 | - | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NIX97_RS29875 | 90121..90369 | - | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NIX97_RS29880 | 90481..91152 | - | 672 | WP_012734065.1 | site-specific integrase | - |
| NIX97_RS29885 | 91277..91567 | - | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIX97_RS29890 | 91715..91909 | + | 195 | Protein_93 | IS21 family transposase | - |
| NIX97_RS29895 | 92567..92794 | - | 228 | WP_020379863.1 | tyrosine-type recombinase/integrase | - |
| NIX97_RS29900 | 93187..94302 | - | 1116 | WP_017923789.1 | Sigma54-dependent transcriptional activator SfnR | VF |
| NIX97_RS29905 | 95141..95764 | + | 624 | WP_045678665.1 | FMN reductase | - |
| NIX97_RS29910 | 95794..96909 | + | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| NIX97_RS29915 | 97065..97433 | - | 369 | Protein_98 | IS6 family transposase | - |
| NIX97_RS29920 | 97731..98969 | - | 1239 | WP_100556612.1 | thioredoxin | - |
| NIX97_RS29925 | 99051..100712 | - | 1662 | WP_232734634.1 | ABC transporter ATP-binding protein/permease | - |
| NIX97_RS29930 | 100820..101242 | - | 423 | WP_257804666.1 | biopolymer transporter ExbD | - |
| NIX97_RS29935 | 101257..101991 | - | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| NIX97_RS29940 | 102015..102761 | - | 747 | WP_232252306.1 | hypothetical protein | VF |
| NIX97_RS29945 | 102793..105168 | - | 2376 | WP_232252305.1 | TonB-dependent receptor | - |
| NIX97_RS29950 | 105482..105946 | - | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| NIX97_RS29955 | 106169..106390 | - | 222 | WP_017433768.1 | hypothetical protein | - |
| NIX97_RS29960 | 106505..107799 | + | 1295 | Protein_107 | IS701 family transposase ISBfun4 | Transposase |
| NIX97_RS29970 | 108741..109469 | - | 729 | WP_257804669.1 | IS6 family transposase ISDge13 | Transposase |
| NIX97_RS29975 | 109510..109869 | + | 360 | Protein_110 | OB-fold nucleic acid binding domain-containing protein | - |
| NIX97_RS29980 | 109882..110169 | + | 288 | WP_176359098.1 | hypothetical protein | - |
| NIX97_RS29985 | 110435..110629 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIX97_RS29990 | 110990..111232 | - | 243 | WP_039205039.1 | hypothetical protein | - |
| NIX97_RS29995 | 111250..111579 | - | 330 | WP_155297075.1 | hypothetical protein | - |
| NIX97_RS30000 | 111828..112229 | - | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIX97_RS30005 | 112229..112465 | - | 237 | WP_017924531.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIX97_RS30010 | 113024..114528 | - | 1505 | Protein_117 | IS21 family transposase ISLisp1 | Transposase |
| NIX97_RS30015 | 114620..116371 | - | 1752 | WP_257804676.1 | S8 family peptidase | - |
| NIX97_RS30020 | 116381..117364 | - | 984 | WP_012732876.1 | ATP-binding protein | - |
| NIX97_RS30025 | 117539..117829 | - | 291 | WP_043308531.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIX97_RS30030 | 117869..118567 | - | 699 | WP_251119232.1 | IS91 family transposase ISAzo26 | Transposase |
| NIX97_RS30035 | 118580..119161 | - | 582 | WP_251119233.1 | hypothetical protein | - |
| NIX97_RS30040 | 119689..120279 | + | 591 | WP_050811476.1 | phage integrase family protein | - |
| NIX97_RS30045 | 120586..122424 | - | 1839 | WP_012732877.1 | hypothetical protein | - |
| NIX97_RS30050 | 122543..122986 | - | 444 | Protein_125 | IS110 family transposase IS1663 | Transposase |
| NIX97_RS30055 | 123049..123476 | + | 428 | Protein_126 | IS5 family transposase IS1421 | Transposase |
| NIX97_RS30065 | 124770..125192 | + | 423 | Protein_128 | transposase | - |
| NIX97_RS30070 | 125314..126510 | - | 1197 | WP_012732881.1 | MFS transporter | - |
| NIX97_RS30075 | 126625..127815 | - | 1191 | WP_012732882.1 | ATP-grasp domain-containing protein | - |
| NIX97_RS30080 | 127996..128793 | - | 798 | WP_012732883.1 | hypothetical protein | - |
| NIX97_RS30085 | 128852..130090 | - | 1239 | WP_012732884.1 | MFS transporter | - |
| NIX97_RS30090 | 130325..131035 | - | 711 | WP_012732885.1 | hypothetical protein | - |
| NIX97_RS30095 | 131099..132328 | - | 1230 | WP_012732886.1 | coenzyme F390 synthetase-like protein | - |
| NIX97_RS30100 | 132347..133147 | - | 801 | WP_012732887.1 | Dihydroanticapsin 7-dehydrogenase | VF |
| NIX97_RS30105 | 133140..133913 | - | 774 | WP_148271078.1 | hypothetical protein | - |
| NIX97_RS30110 | 133932..134708 | - | 777 | WP_012732889.1 | DUF3050 domain-containing protein | - |
| NIX97_RS30115 | 135182..135364 | - | 183 | Protein_138 | integrase core domain-containing protein | - |
| NIX97_RS30120 | 135466..136311 | - | 846 | WP_251118845.1 | hypothetical protein | - |
| NIX97_RS30130 | 137115..140717 | - | 3603 | WP_257804680.1 | hypothetical protein | - |
| NIX97_RS30135 | 140802..141008 | - | 207 | WP_043308546.1 | hypothetical protein | - |
| NIX97_RS30140 | 141089..141298 | - | 210 | WP_043308547.1 | hypothetical protein | - |
| NIX97_RS30145 | 141443..142171 | - | 729 | WP_257804681.1 | IS6 family transposase ISDge13 | Transposase |
| NIX97_RS30150 | 142217..142702 | - | 486 | WP_234038078.1 | hypothetical protein | VF |
| NIX97_RS30155 | 142812..143489 | - | 678 | WP_012732715.1 | hypothetical protein | - |
| NIX97_RS30160 | 143877..144681 | - | 805 | Protein_147 | IS5 family transposase IS1421 | Transposase |
| NIX97_RS30165 | 144862..145269 | - | 408 | WP_232252319.1 | hypothetical protein | - |
| NIX97_RS30170 | 145462..146279 | + | 818 | WP_085962346.1 | IS5 family transposase ISBugl2 | Transposase |
| NIX97_RS30175 | 146289..148123 | - | 1835 | Protein_150 | site-specific integrase | - |
| NIX97_RS30180 | 148126..148467 | - | 342 | WP_257804684.1 | hypothetical protein | - |
| NIX97_RS30185 | 148524..148769 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| NIX97_RS30190 | 148766..149008 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| NIX97_RS30195 | 149022..149306 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| NIX97_RS30200 | 149699..149896 | - | 198 | WP_127840952.1 | hypothetical protein | - |
| NIX97_RS30205 | 150057..150590 | - | 534 | WP_017924249.1 | RES family NAD+ phosphorylase | - |
| NIX97_RS30210 | 150587..151012 | - | 426 | WP_017924250.1 | DUF2384 domain-containing protein | - |
| NIX97_RS30215 | 151159..151344 | - | 186 | WP_171467077.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|