MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100711 bp
Accession: NZ_CP100290 Location: 1..100711 Organism: Burkholderia glumae strain BGR48S Replicon: plasmid p48s4p
Accession: NZ_CP100290 Location: 1..100711 Organism: Burkholderia glumae strain BGR48S Replicon: plasmid p48s4p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIX85_RS30310 | 50..1234 | + | 1185 | WP_257820651.1 | hypothetical protein | VF |
| NIX85_RS30315 | 1251..2225 | + | 975 | WP_257806992.1 | ParB/RepB/Spo0J family partition protein | - |
| NIX85_RS30320 | 2555..3886 | + | 1332 | WP_257820652.1 | helix-turn-helix domain-containing protein | - |
| NIX85_RS30325 | 4876..5061 | + | 186 | WP_153479281.1 | hypothetical protein | - |
| NIX85_RS30330 | 5208..5624 | + | 417 | WP_012732708.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| NIX85_RS30335 | 5621..6154 | + | 534 | WP_257820654.1 | RES family NAD+ phosphorylase | Toxin Detail |
| NIX85_RS30340 | 6324..6512 | + | 189 | WP_257820656.1 | hypothetical protein | - |
| NIX85_RS30345 | 6599..7537 | - | 939 | WP_257820657.1 | hypothetical protein | - |
| NIX85_RS30350 | 7948..8220 | + | 273 | WP_257820659.1 | integrase | - |
| NIX85_RS30355 | 8234..8557 | + | 324 | WP_257820661.1 | hypothetical protein | - |
| NIX85_RS30360 | 8790..9878 | + | 1089 | WP_257820732.1 | hypothetical protein | - |
| NIX85_RS30365 | 9930..10085 | + | 156 | WP_257807019.1 | hypothetical protein | - |
| NIX85_RS30370 | 10245..10625 | + | 381 | WP_257807021.1 | hypothetical protein | - |
| NIX85_RS30375 | 10622..12445 | + | 1824 | WP_257820663.1 | site-specific integrase | - |
| NIX85_RS30380 | 12486..12695 | + | 210 | WP_257807025.1 | hypothetical protein | - |
| NIX85_RS30385 | 12776..12982 | + | 207 | WP_257807027.1 | hypothetical protein | - |
| NIX85_RS30390 | 13223..16201 | + | 2979 | WP_257820665.1 | KAP family NTPase | - |
| NIX85_RS30395 | 16377..16664 | - | 288 | WP_257807031.1 | hypothetical protein | - |
| NIX85_RS30400 | 16680..19828 | - | 3149 | Protein_18 | error-prone DNA polymerase | - |
| NIX85_RS30405 | 19835..21312 | - | 1478 | Protein_19 | DNA polymerase Y family protein | - |
| NIX85_RS30410 | 21230..21934 | - | 705 | WP_257820734.1 | translesion DNA synthesis-associated protein ImuA | - |
| NIX85_RS30415 | 22210..22542 | + | 333 | WP_012735327.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NIX85_RS30420 | 22700..23221 | + | 522 | WP_153479259.1 | arsenate reductase ArsC | - |
| NIX85_RS30425 | 23208..24269 | + | 1062 | WP_012735325.1 | ACR3 family arsenite efflux transporter | - |
| NIX85_RS30430 | 24279..25106 | + | 828 | WP_012735324.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| NIX85_RS30435 | 25120..25884 | + | 765 | WP_012735323.1 | arsenical resistance protein ArsH | - |
| NIX85_RS30440 | 25835..27097 | + | 1263 | WP_193373184.1 | MFS transporter | - |
| NIX85_RS30445 | 27182..28573 | + | 1392 | WP_257820675.1 | gamma-mobile-trio recombinase GmtY | - |
| NIX85_RS30450 | 28631..29134 | + | 504 | WP_012732754.1 | IS66 family transposase ISRtr5 | Transposase |
| NIX85_RS30455 | 29110..29460 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIX85_RS30460 | 29492..31048 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIX85_RS30465 | 31214..31489 | - | 276 | WP_257820676.1 | hypothetical protein | - |
| NIX85_RS30470 | 31610..31999 | - | 390 | WP_257820682.1 | hypothetical protein | - |
| NIX85_RS30475 | 32278..32691 | + | 414 | WP_194290244.1 | PAAR domain-containing protein | - |
| NIX85_RS30480 | 32696..33193 | + | 498 | WP_254983512.1 | DUF4123 domain-containing protein | - |
| NIX85_RS30485 | 33186..33653 | + | 468 | WP_257820685.1 | hypothetical protein | - |
| NIX85_RS30490 | 33541..34134 | + | 594 | WP_257820686.1 | restriction endonuclease fold toxin 5 domain-containing protein | - |
| NIX85_RS30495 | 34144..34854 | + | 711 | WP_254983516.1 | Imm52 family immunity protein | - |
| NIX85_RS30500 | 34891..35433 | - | 543 | WP_257820688.1 | sugar phosphate isomerase/epimerase | - |
| NIX85_RS30505 | 35631..36119 | - | 489 | WP_254983520.1 | hypothetical protein | - |
| NIX85_RS30510 | 36194..36661 | - | 468 | WP_254983646.1 | hypothetical protein | - |
| NIX85_RS30515 | 36840..37268 | - | 429 | WP_254983522.1 | antirestriction protein | - |
| NIX85_RS30520 | 37285..37704 | - | 420 | WP_254983524.1 | antirestriction protein | - |
| NIX85_RS30525 | 37837..38136 | - | 300 | WP_257807071.1 | hypothetical protein | - |
| NIX85_RS30530 | 38251..39006 | - | 756 | WP_257807073.1 | N-6 DNA methylase | - |
| NIX85_RS30535 | 39202..39720 | - | 519 | WP_254983530.1 | hypothetical protein | - |
| NIX85_RS30540 | 39848..40048 | + | 201 | WP_254983532.1 | hypothetical protein | - |
| NIX85_RS30545 | 40196..40624 | - | 429 | WP_257807075.1 | hypothetical protein | - |
| NIX85_RS30550 | 41453..41680 | - | 228 | WP_251108962.1 | hypothetical protein | - |
| NIX85_RS30555 | 41751..42314 | - | 564 | WP_254983536.1 | DUF3577 domain-containing protein | - |
| NIX85_RS30560 | 42677..44323 | - | 1647 | WP_257807076.1 | UvrD-helicase domain-containing protein | - |
| NIX85_RS30565 | 44607..44900 | - | 294 | WP_257807078.1 | hypothetical protein | - |
| NIX85_RS30570 | 44912..45214 | - | 303 | WP_257820715.1 | DNA-binding protein Bv3F | VF |
| NIX85_RS30575 | 45211..45747 | - | 537 | WP_257820716.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| NIX85_RS30580 | 45779..48115 | - | 2337 | WP_257820724.1 | DNA topoisomerase | - |
| NIX85_RS30585 | 48112..48627 | - | 516 | WP_257820725.1 | hypothetical protein | - |
| NIX85_RS30590 | 48630..49070 | - | 441 | WP_257820727.1 | single-stranded DNA-binding protein | - |
| NIX85_RS30595 | 49228..50361 | - | 1134 | WP_257820729.1 | hypothetical protein | - |
| NIX85_RS30600 | 50749..51744 | + | 996 | WP_251108953.1 | CAP domain-containing protein | - |
| NIX85_RS30605 | 51769..52347 | - | 579 | WP_251108952.1 | hypothetical protein | - |
| NIX85_RS30610 | 52355..53641 | - | 1287 | WP_257814184.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| NIX85_RS30615 | 53667..54158 | - | 492 | WP_254983560.1 | hypothetical protein | - |
| NIX85_RS30620 | 54158..55165 | - | 1008 | WP_254983562.1 | ATPase, T2SS/T4P/T4SS family | - |
| NIX85_RS30625 | 55200..55691 | - | 492 | WP_251108948.1 | type 4 pilus major pilin | - |
| NIX85_RS30630 | 55783..56901 | - | 1119 | WP_257441919.1 | type II secretion system F family protein | - |
| NIX85_RS30635 | 56898..58625 | - | 1728 | WP_257820596.1 | ATPase, T2SS/T4P/T4SS family | - |
| NIX85_RS30640 | 58622..59890 | - | 1269 | WP_257441923.1 | type 4b pilus protein PilO2 | - |
| NIX85_RS30645 | 59887..60561 | - | 675 | WP_257441925.1 | type IV pilus biogenesis protein PilP | - |
| NIX85_RS30650 | 60573..62279 | - | 1707 | WP_257441927.1 | pilus assembly protein PilN | - |
| NIX85_RS30655 | 62279..62962 | - | 684 | WP_257441929.1 | TcpQ domain-containing protein | - |
| NIX85_RS30660 | 62959..63402 | - | 444 | WP_257806953.1 | hypothetical protein | VF |
| NIX85_RS30665 | 63402..64457 | - | 1056 | WP_257441932.1 | hypothetical protein | VF |
| NIX85_RS30670 | 64454..65773 | - | 1320 | WP_257820599.1 | TrbI/VirB10 family protein | - |
| NIX85_RS30675 | 65780..66592 | - | 813 | WP_254983576.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NIX85_RS30680 | 66589..67191 | - | 603 | WP_254983577.1 | VirB8/TrbF family protein | - |
| NIX85_RS30685 | 67614..67802 | + | 189 | WP_254983578.1 | hypothetical protein | - |
| NIX85_RS30690 | 67799..68758 | - | 960 | WP_254983579.1 | type IV secretion system protein | - |
| NIX85_RS30695 | 68751..69086 | - | 336 | WP_257441940.1 | hypothetical protein | - |
| NIX85_RS30700 | 69086..69349 | - | 264 | WP_257441941.1 | hypothetical protein | - |
| NIX85_RS30705 | 69357..70124 | - | 768 | WP_257811942.1 | conjugal transfer protein TrbJ | - |
| NIX85_RS30710 | 70121..70756 | - | 636 | WP_257441943.1 | hypothetical protein | - |
| NIX85_RS30715 | 70753..73395 | - | 2643 | WP_257441944.1 | hypothetical protein | - |
| NIX85_RS30720 | 73403..73771 | - | 369 | WP_254983587.1 | hypothetical protein | - |
| NIX85_RS30725 | 73765..73989 | - | 225 | WP_251108934.1 | hypothetical protein | - |
| NIX85_RS30730 | 73993..74394 | - | 402 | WP_257820603.1 | Putative conjugal transfer protein | VF |
| NIX85_RS30735 | 74282..75022 | - | 741 | WP_257820605.1 | Type IV secretion system protein VirB11 | VF |
| NIX85_RS30740 | 75006..75797 | - | 792 | WP_257820606.1 | Type IV secretion system protein virB1 | VF |
| NIX85_RS30745 | 76434..76919 | + | 486 | WP_257820608.1 | hypothetical protein | - |
| NIX85_RS30750 | 76931..79063 | + | 2133 | WP_257820617.1 | hypothetical protein | Relaxase |
| NIX85_RS30755 | 79095..79283 | + | 189 | WP_257820619.1 | hypothetical protein | - |
| NIX85_RS30760 | 79397..81499 | + | 2103 | WP_257820621.1 | type IV conjugative transfer system coupling protein TraD | - |
| NIX85_RS30765 | 81486..82247 | + | 762 | WP_257820622.1 | DUF4400 domain-containing protein | - |
| NIX85_RS30770 | 82309..83208 | + | 900 | WP_257820735.1 | LysR substrate-binding domain-containing protein | - |
| NIX85_RS30775 | 83418..84680 | + | 1263 | WP_257820744.1 | MFS transporter | - |
| NIX85_RS30780 | 84805..85086 | + | 282 | WP_254983605.1 | hypothetical protein | - |
| NIX85_RS30785 | 85520..86467 | + | 948 | WP_275990967.1 | ParA family protein | - |
| NIX85_RS30790 | 86464..88152 | + | 1689 | WP_257820623.1 | hypothetical protein | - |
| NIX85_RS30795 | 88149..88718 | + | 570 | WP_254983609.1 | DUF2857 domain-containing protein | - |
| NIX85_RS30800 | 89087..89479 | + | 393 | WP_257820625.1 | DUF4031 domain-containing protein | - |
| NIX85_RS30805 | 89476..90612 | + | 1137 | WP_257820632.1 | helix-turn-helix transcriptional regulator | - |
| NIX85_RS30810 | 90609..90953 | + | 345 | WP_254983614.1 | hypothetical protein | - |
| NIX85_RS30815 | 90950..91363 | + | 414 | WP_257820634.1 | hypothetical protein | - |
| NIX85_RS30820 | 91475..93376 | + | 1902 | WP_257820642.1 | DNA cytosine methyltransferase | - |
| NIX85_RS30825 | 93419..94012 | + | 594 | WP_254983617.1 | hypothetical protein | - |
| NIX85_RS30830 | 94351..95661 | + | 1311 | WP_257806983.1 | site-specific DNA-methyltransferase | - |
| NIX85_RS30835 | 95658..96014 | + | 357 | WP_254983620.1 | hypothetical protein | - |
| NIX85_RS30840 | 96312..96806 | + | 495 | WP_257441969.1 | hypothetical protein | - |
| NIX85_RS30845 | 96922..98625 | + | 1704 | WP_257820644.1 | hypothetical protein | - |
| NIX85_RS30850 | 98719..99723 | + | 1005 | WP_257441971.1 | TIGR03761 family integrating conjugative element protein | - |
| NIX85_RS30855 | 99720..100205 | + | 486 | WP_257814196.1 | DUF3158 family protein | - |
| NIX85_RS30860 | 100263..100550 | + | 288 | WP_254983631.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|