MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 61432 bp
Accession: NZ_CP100284 Location: 1..61432 Organism: Burkholderia glumae strain YH8 Replicon: plasmid pyh83p
Accession: NZ_CP100284 Location: 1..61432 Organism: Burkholderia glumae strain YH8 Replicon: plasmid pyh83p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY09_RS31340 | 1147..1668 | - | 522 | WP_257827586.1 | plasmid replication initiator TrfA | - |
| NIY09_RS31345 | 2681..3262 | - | 582 | WP_257827588.1 | hypothetical protein | - |
| NIY09_RS31350 | 3306..3563 | - | 258 | WP_257827589.1 | ParB N-terminal domain-containing protein | - |
| NIY09_RS31735 | 4190..4411 | - | 222 | WP_276585563.1 | hypothetical protein | VF |
| NIY09_RS31360 | 5142..5870 | + | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| NIY09_RS31365 | 6471..6656 | + | 186 | WP_148271081.1 | hypothetical protein | - |
| NIY09_RS31370 | 6810..7055 | + | 246 | WP_012734113.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| NIY09_RS31375 | 7045..7347 | + | 303 | WP_012734112.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NIY09_RS31380 | 7507..7749 | + | 243 | WP_043308436.1 | hypothetical protein | - |
| NIY09_RS31385 | 7957..8412 | + | 456 | WP_012734111.1 | hypothetical protein | - |
| NIY09_RS31390 | 8416..8697 | + | 282 | WP_043308454.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIY09_RS31395 | 8881..9198 | + | 318 | WP_148271069.1 | hypothetical protein | - |
| NIY09_RS31400 | 9586..9870 | + | 285 | WP_017432347.1 | hypothetical protein | - |
| NIY09_RS31405 | 9884..10126 | + | 243 | WP_124837682.1 | hypothetical protein | - |
| NIY09_RS31410 | 10123..10368 | + | 246 | WP_127913916.1 | hypothetical protein | - |
| NIY09_RS31415 | 10425..10766 | + | 342 | WP_012732710.1 | hypothetical protein | - |
| NIY09_RS31420 | 10769..12604 | + | 1836 | WP_012732711.1 | site-specific integrase | - |
| NIY09_RS31425 | 12893..13912 | - | 1020 | WP_252836473.1 | IS110 family transposase IS884 | Transposase |
| NIY09_RS31435 | 15047..15454 | + | 408 | WP_232252319.1 | hypothetical protein | - |
| NIY09_RS31440 | 15635..16440 | + | 806 | Protein_20 | IS5 family transposase | - |
| NIY09_RS31445 | 16828..17505 | + | 678 | WP_012732715.1 | hypothetical protein | - |
| NIY09_RS31450 | 17579..18100 | + | 522 | WP_232252320.1 | hypothetical protein | VF |
| NIY09_RS31455 | 18146..18874 | + | 729 | WP_012732717.1 | IS6 family transposase ISDge13 | Transposase |
| NIY09_RS31460 | 19244..20596 | - | 1353 | WP_012732718.1 | Luminescence regulatory protein LuxO | VF |
| NIY09_RS31465 | 20834..21034 | + | 201 | Protein_25 | DUF892 family protein | - |
| NIY09_RS31470 | 20967..21377 | - | 411 | WP_012732719.1 | manganese catalase family protein | - |
| NIY09_RS31475 | 21885..22328 | + | 444 | WP_153479209.1 | Sensor histidine kinase RcsC | VF |
| NIY09_RS31480 | 22614..22892 | + | 279 | Protein_28 | low affinity iron permease family protein | - |
| NIY09_RS31485 | 22965..23762 | - | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIY09_RS31490 | 23755..25260 | - | 1506 | WP_012732721.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIY09_RS31495 | 25444..27024 | - | 1581 | WP_257806134.1 | IS66 family transposase ISAeh1 | Transposase |
| NIY09_RS31500 | 27055..27408 | - | 354 | WP_257804587.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS31505 | 27384..27914 | - | 531 | WP_257806136.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS31510 | 28008..28196 | - | 189 | Protein_34 | IS66 family transposase ISRm2 | Transposase |
| NIY09_RS31515 | 28286..28903 | + | 618 | Protein_35 | IS66 family transposase ISAeh1 | Transposase |
| NIY09_RS31520 | 28939..29817 | - | 879 | Protein_36 | ISNCY family transposase ISRel10 | Transposase |
| NIY09_RS31525 | 30175..30366 | + | 192 | Protein_37 | IS6 family transposase ISApr5 | Transposase |
| NIY09_RS31530 | 30506..31756 | - | 1251 | WP_251118632.1 | transporter | - |
| NIY09_RS31535 | 31760..32869 | - | 1110 | WP_012732866.1 | crosslink repair DNA glycosylase YcaQ family protein | - |
| NIY09_RS31540 | 32966..34015 | - | 1050 | WP_251118631.1 | beta-propeller fold lactonase family protein | - |
| NIY09_RS31545 | 34539..35266 | - | 728 | Protein_41 | IS6 family transposase ISDge13 | Transposase |
| NIY09_RS31550 | 35387..37705 | + | 2319 | WP_257827577.1 | hypothetical protein | - |
| NIY09_RS31555 | 37753..38139 | - | 387 | WP_257827579.1 | hypothetical protein | - |
| NIY09_RS31560 | 38397..39026 | + | 630 | WP_252836651.1 | hypothetical protein | VF |
| NIY09_RS31565 | 39065..39313 | + | 249 | WP_039201920.1 | hypothetical protein | - |
| NIY09_RS31570 | 39325..41423 | + | 2099 | Protein_46 | zeta toxin family protein | - |
| NIY09_RS31575 | 41897..42295 | + | 399 | WP_161522125.1 | outer membrane protein assembly factor BamE | - |
| NIY09_RS31580 | 42410..42658 | + | 249 | WP_257827580.1 | hypothetical protein | - |
| NIY09_RS31585 | 42959..43359 | + | 401 | Protein_49 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| NIY09_RS31590 | 44048..44287 | + | 240 | WP_257827581.1 | hypothetical protein | - |
| NIY09_RS31595 | 44411..44770 | + | 360 | WP_257827582.1 | hypothetical protein | VF |
| NIY09_RS31600 | 44901..45152 | - | 252 | WP_257827592.1 | hypothetical protein | - |
| NIY09_RS31605 | 45283..45824 | + | 542 | Protein_53 | adhesin | - |
| NIY09_RS31610 | 45813..46091 | - | 279 | WP_257827595.1 | hypothetical protein | - |
| NIY09_RS31615 | 46163..47341 | + | 1179 | WP_257827590.1 | hypothetical protein | VF |
| NIY09_RS31620 | 47284..49128 | + | 1845 | WP_257827591.1 | hypothetical protein | VF |
| NIY09_RS31625 | 49145..49798 | + | 654 | WP_012732807.1 | hypothetical protein | - |
| NIY09_RS31630 | 49795..50214 | + | 420 | WP_017432355.1 | hypothetical protein | - |
| NIY09_RS31635 | 50229..51566 | + | 1338 | WP_017432354.1 | DUF1173 domain-containing protein | - |
| NIY09_RS31640 | 51984..52883 | + | 900 | WP_257827583.1 | Crp/Fnr family transcriptional regulator | - |
| NIY09_RS31645 | 54126..54572 | - | 447 | WP_257827584.1 | plasmid replication initiator TrfA | - |
| NIY09_RS31650 | 54580..54783 | + | 204 | WP_035979675.1 | hypothetical protein | - |
| NIY09_RS31655 | 55634..56635 | - | 1002 | WP_167539780.1 | ParB/RepB/Spo0J family partition protein | - |
| NIY09_RS31740 | 56779..57108 | - | 330 | WP_276585562.1 | ParA family protein | - |
| NIY09_RS31745 | 57122..57364 | - | 243 | WP_276585564.1 | hypothetical protein | VF |
| NIY09_RS31665 | 58098..58829 | + | 732 | Protein_66 | IS6 family transposase | - |
| NIY09_RS31670 | 59772..60014 | + | 243 | Protein_67 | type II toxin-antitoxin system ParD family antitoxin | - |
| NIY09_RS31675 | 60004..60304 | + | 301 | Protein_68 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIY09_RS31680 | 60465..60707 | + | 243 | WP_043308436.1 | hypothetical protein | - |
| NIY09_RS31685 | 60915..61370 | + | 456 | WP_012734111.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|