MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 147448 bp
Accession: NZ_CP100282 Location: 1..147448 Organism: Burkholderia glumae strain YH8 Replicon: plasmid pyh81p
Accession: NZ_CP100282 Location: 1..147448 Organism: Burkholderia glumae strain YH8 Replicon: plasmid pyh81p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY09_RS29980 | 607..816 | + | 210 | WP_042968082.1 | hypothetical protein | - |
| NIY09_RS29985 | 1697..2002 | + | 306 | WP_012734095.1 | helix-turn-helix transcriptional regulator | - |
| NIY09_RS29990 | 2079..2954 | + | 876 | WP_222105279.1 | reverse transcriptase family protein | - |
| NIY09_RS29995 | 3218..3997 | + | 780 | WP_043308431.1 | hypothetical protein | - |
| NIY09_RS30000 | 4128..4496 | + | 369 | WP_045678674.1 | hypothetical protein | - |
| NIY09_RS30005 | 4539..4742 | + | 204 | Protein_6 | IS66 family transposase ISRm2 | Transposase |
| NIY09_RS30010 | 4829..5305 | + | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS30015 | 5281..5631 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30020 | 5663..7219 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIY09_RS30025 | 7209..7424 | - | 216 | WP_237711043.1 | IS66 family transposase ISRm2 | Transposase |
| NIY09_RS30030 | 7602..9053 | - | 1452 | WP_012734050.1 | Outer membrane protein TolC | VF |
| NIY09_RS30035 | 9043..10461 | - | 1419 | WP_257806586.1 | Hemolysin secretion protein D, chromosomal | VF |
| NIY09_RS30040 | 10466..12604 | - | 2139 | WP_012734048.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| NIY09_RS30045 | 13078..16512 | - | 3435 | WP_012734047.1 | S-layer family protein | - |
| NIY09_RS30050 | 17183..17988 | + | 806 | WP_085962370.1 | IS5 family transposase IS1421 | Transposase |
| NIY09_RS30055 | 18168..18815 | + | 648 | Protein_16 | IS6 family transposase ISDge13 | Transposase |
| NIY09_RS30060 | 19003..19812 | + | 810 | Protein_17 | IS110 family transposase IS884 | Transposase |
| NIY09_RS30065 | 19926..20972 | - | 1047 | WP_012734099.1 | IS481 family transposase IS1419 | Transposase |
| NIY09_RS30070 | 21357..21890 | + | 534 | WP_148271068.1 | hypothetical protein | - |
| NIY09_RS30075 | 22084..22905 | + | 822 | WP_043308413.1 | hypothetical protein | - |
| NIY09_RS30080 | 22976..25246 | + | 2271 | WP_257739417.1 | IS91 family transposase ISAzo26 | Transposase |
| NIY09_RS30085 | 25339..25596 | + | 258 | WP_012734043.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| NIY09_RS30090 | 25596..26024 | + | 429 | WP_012734042.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIY09_RS30095 | 26541..26924 | + | 384 | WP_257806714.1 | hypothetical protein | - |
| NIY09_RS30100 | 27402..27857 | + | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS30105 | 27857..28210 | + | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30110 | 28310..29896 | + | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30115 | 29877..31379 | - | 1503 | WP_257827572.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIY09_RS30120 | 31447..33132 | + | 1686 | WP_257827563.1 | hypothetical protein | - |
| NIY09_RS30125 | 33177..33563 | - | 387 | WP_257827565.1 | hypothetical protein | - |
| NIY09_RS30130 | 33821..34450 | + | 630 | WP_252836651.1 | hypothetical protein | VF |
| NIY09_RS30135 | 34489..34737 | + | 249 | WP_039201920.1 | hypothetical protein | - |
| NIY09_RS30140 | 34749..36848 | + | 2100 | WP_257827567.1 | zeta toxin family protein | - |
| NIY09_RS30145 | 36859..37278 | + | 420 | WP_161522124.1 | hypothetical protein | - |
| NIY09_RS30150 | 37323..37721 | + | 399 | WP_161522125.1 | outer membrane protein assembly factor BamE | - |
| NIY09_RS30155 | 37878..38309 | + | 432 | WP_017432893.1 | hypothetical protein | - |
| NIY09_RS30160 | 38348..38791 | + | 444 | WP_230674406.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| NIY09_RS30165 | 38788..39105 | + | 318 | WP_012732810.1 | hypothetical protein | - |
| NIY09_RS30170 | 39102..39725 | + | 624 | WP_012732809.1 | hypothetical protein | - |
| NIY09_RS30175 | 39850..44565 | + | 4716 | WP_257827569.1 | Autotransporter adhesin SadA | VF |
| NIY09_RS30180 | 44582..45235 | + | 654 | WP_012732807.1 | hypothetical protein | - |
| NIY09_RS30185 | 45232..45651 | + | 420 | WP_017432355.1 | hypothetical protein | - |
| NIY09_RS30190 | 45666..47003 | + | 1338 | WP_017432354.1 | DUF1173 domain-containing protein | - |
| NIY09_RS30195 | 47421..48320 | + | 900 | WP_039201521.1 | Crp/Fnr family transcriptional regulator | - |
| NIY09_RS30200 | 49849..51153 | + | 1305 | WP_017432352.1 | replication initiation protein | - |
| NIY09_RS30205 | 51238..52275 | - | 1038 | WP_017432351.1 | ParB/RepB/Spo0J family partition protein | - |
| NIY09_RS30210 | 52278..52922 | - | 645 | WP_017432350.1 | AAA family ATPase | - |
| NIY09_RS30215 | 53601..54203 | - | 603 | WP_127913917.1 | hypothetical protein | - |
| NIY09_RS30220 | 54688..54873 | + | 186 | WP_017432348.1 | hypothetical protein | - |
| NIY09_RS30225 | 55080..55349 | + | 270 | WP_012732894.1 | DUF1778 domain-containing protein | - |
| NIY09_RS30230 | 55346..55834 | + | 489 | WP_012732893.1 | GNAT family N-acetyltransferase | - |
| NIY09_RS30235 | 56241..56525 | + | 285 | WP_017432347.1 | hypothetical protein | - |
| NIY09_RS30240 | 56539..56781 | + | 243 | WP_124837682.1 | hypothetical protein | - |
| NIY09_RS30245 | 56778..57023 | + | 246 | WP_127913916.1 | hypothetical protein | - |
| NIY09_RS30250 | 57080..57421 | + | 342 | WP_012732710.1 | hypothetical protein | - |
| NIY09_RS30255 | 57424..59259 | + | 1836 | WP_012732711.1 | site-specific integrase | - |
| NIY09_RS30260 | 59362..59769 | + | 408 | WP_230674618.1 | hypothetical protein | - |
| NIY09_RS30265 | 60032..60283 | + | 252 | WP_012734108.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NIY09_RS30270 | 60277..60627 | + | 351 | WP_012734107.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| NIY09_RS30275 | 60686..60880 | + | 195 | WP_124837685.1 | hypothetical protein | - |
| NIY09_RS30280 | 61030..61251 | + | 222 | WP_017433768.1 | hypothetical protein | - |
| NIY09_RS30285 | 61474..61938 | + | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| NIY09_RS30290 | 62252..64627 | + | 2376 | WP_232252305.1 | TonB-dependent receptor | - |
| NIY09_RS30295 | 64659..65405 | + | 747 | WP_232252306.1 | hypothetical protein | VF |
| NIY09_RS30300 | 65429..66163 | + | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| NIY09_RS30305 | 66178..66600 | + | 423 | WP_012734103.1 | biopolymer transporter ExbD | - |
| NIY09_RS30310 | 66708..68369 | + | 1662 | WP_232252307.1 | ABC transporter ATP-binding protein/permease | - |
| NIY09_RS30315 | 68451..69688 | + | 1238 | Protein_68 | thioredoxin | - |
| NIY09_RS30320 | 69986..70354 | + | 369 | Protein_69 | IS6 family transposase ISDge13 | Transposase |
| NIY09_RS30325 | 70510..71625 | - | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| NIY09_RS30330 | 71655..72278 | - | 624 | WP_045678665.1 | FMN reductase | - |
| NIY09_RS30335 | 73180..73482 | + | 303 | Protein_72 | IS481 family transposase IS1419 | Transposase |
| NIY09_RS30340 | 73541..75127 | - | 1587 | WP_012732733.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30345 | 75227..75580 | - | 354 | WP_012732734.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30350 | 75580..76035 | - | 456 | WP_012732735.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS30355 | 76122..76871 | + | 750 | Protein_76 | IS481 family transposase IS1419 | Transposase |
| NIY09_RS30360 | 76984..78099 | + | 1116 | WP_012734097.1 | Sigma54-dependent transcriptional activator SfnR | VF |
| NIY09_RS30365 | 78492..78719 | + | 228 | WP_020379863.1 | tyrosine-type recombinase/integrase | - |
| NIY09_RS30370 | 79250..80806 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIY09_RS30375 | 80838..81188 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30380 | 81164..81640 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS31725 | 81704..82642 | + | 939 | WP_017433349.1 | hypothetical protein | VF |
| NIY09_RS30390 | 82770..83496 | - | 727 | Protein_83 | IS6 family transposase | - |
| NIY09_RS30395 | 83512..83910 | - | 399 | WP_012734052.1 | nuclear transport factor 2 family protein | - |
| NIY09_RS30400 | 83992..84933 | + | 942 | WP_012734053.1 | Glycine cleavage system transcriptional activator | VF |
| NIY09_RS30405 | 84936..85148 | + | 213 | WP_017424862.1 | hypothetical protein | - |
| NIY09_RS30410 | 85915..86529 | - | 615 | WP_254986641.1 | hypothetical protein | VF |
| NIY09_RS30415 | 86560..87153 | - | 594 | WP_254986640.1 | FAD-dependent monooxygenase | - |
| NIY09_RS30420 | 87881..88732 | - | 852 | WP_012734056.1 | hypothetical protein | VF |
| NIY09_RS30425 | 88959..89378 | + | 420 | WP_012734057.1 | hypothetical protein | - |
| NIY09_RS30430 | 89686..90890 | + | 1205 | WP_085962364.1 | IS3 family transposase ISBugl1 | Transposase |
| NIY09_RS30435 | 90927..91190 | - | 264 | Protein_92 | IS481 family transposase IS1419 | Transposase |
| NIY09_RS30440 | 91285..92489 | + | 1205 | WP_085962358.1 | IS3 family transposase IS1417 | Transposase |
| NIY09_RS30445 | 92598..93835 | + | 1238 | WP_085962446.1 | IS3 family transposase IS1417 | Transposase |
| NIY09_RS30450 | 93867..94154 | + | 288 | Protein_95 | IS21 family transposase ISBmu3 | Transposase |
| NIY09_RS30455 | 94234..95280 | - | 1047 | WP_012734061.1 | IS481 family transposase IS1419 | Transposase |
| NIY09_RS30460 | 95993..96187 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIY09_RS30465 | 96257..96559 | - | 303 | WP_127913981.1 | hypothetical protein | - |
| NIY09_RS30470 | 96623..96865 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| NIY09_RS30475 | 96878..97141 | - | 264 | WP_017433216.1 | hypothetical protein | - |
| NIY09_RS30480 | 97153..97473 | - | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NIY09_RS30485 | 97467..97715 | - | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| NIY09_RS30490 | 97827..98498 | - | 672 | WP_012734065.1 | site-specific integrase | - |
| NIY09_RS30495 | 98623..98913 | - | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIY09_RS30500 | 98953..100506 | - | 1554 | WP_102952664.1 | IS91 family transposase ISAzo26 | Transposase |
| NIY09_RS30505 | 101503..102186 | + | 684 | WP_012734068.1 | Adenylyl-sulfate kinase | VF |
| NIY09_RS30510 | 102259..103074 | + | 816 | WP_035976812.1 | sulfotransferase | - |
| NIY09_RS30515 | 103190..103456 | - | 267 | Protein_108 | IS1182 family transposase ISThsp18 | Transposase |
| NIY09_RS30520 | 103606..104901 | + | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| NIY09_RS30525 | 105260..106279 | - | 1020 | WP_045678676.1 | IS110 family transposase IS884 | Transposase |
| NIY09_RS30530 | 106482..107299 | + | 818 | WP_085962447.1 | IS5-like element ISBugl2 family transposase | - |
| NIY09_RS30535 | 107599..108195 | + | 597 | WP_017432949.1 | HD-GYP domain-containing protein | - |
| NIY09_RS30540 | 108491..109589 | + | 1099 | Protein_113 | tyrosine-type recombinase/integrase | - |
| NIY09_RS30545 | 109713..111296 | - | 1584 | WP_012732724.1 | hypothetical protein | VF |
| NIY09_RS30550 | 111779..112123 | + | 345 | WP_017432531.1 | hypothetical protein | - |
| NIY09_RS30555 | 112163..113860 | + | 1698 | WP_012732723.1 | hypothetical protein | VF |
| NIY09_RS30560 | 114037..115761 | + | 1725 | WP_012734074.1 | hypothetical protein | VF |
| NIY09_RS30565 | 115980..116468 | + | 489 | WP_080569430.1 | hypothetical protein | - |
| NIY09_RS30570 | 116795..117176 | - | 382 | Protein_119 | transposase | - |
| NIY09_RS30575 | 117508..118527 | - | 1020 | WP_252836473.1 | IS110 family transposase IS884 | Transposase |
| NIY09_RS30580 | 118730..119547 | + | 818 | WP_085962346.1 | IS5-like element ISBugl2 family transposase | - |
| NIY09_RS31730 | 120365..121924 | + | 1560 | WP_012734076.1 | Aerotaxis receptor | VF |
| NIY09_RS30595 | 122024..122723 | + | 700 | Protein_123 | IS3 family transposase | - |
| NIY09_RS30600 | 122813..123289 | + | 477 | WP_039203908.1 | IS66 family transposase ISRtr5 | Transposase |
| NIY09_RS30605 | 123265..123615 | + | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIY09_RS30610 | 123647..125203 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIY09_RS30615 | 125230..125562 | + | 333 | Protein_127 | IS3 family transposase IS1416 | Transposase |
| NIY09_RS30620 | 125594..128128 | - | 2535 | WP_158335140.1 | Sensor histidine kinase RcsC | VF |
| NIY09_RS30625 | 128278..129057 | - | 780 | WP_012734079.1 | Sensor histidine kinase RcsC | VF |
| NIY09_RS30630 | 129277..130059 | - | 783 | WP_012734080.1 | Regulator of RpoS | VF |
| NIY09_RS30635 | 130229..131032 | + | 804 | Protein_131 | IS5 family transposase | - |
| NIY09_RS30645 | 132574..134061 | + | 1488 | WP_124837819.1 | hypothetical protein | - |
| NIY09_RS30650 | 134157..136004 | + | 1848 | WP_012734082.1 | clostripain-related cysteine peptidase | - |
| NIY09_RS30655 | 136183..136988 | + | 806 | WP_085962449.1 | IS5 family transposase | - |
| NIY09_RS30660 | 136963..137142 | - | 180 | Protein_136 | hypothetical protein | - |
| NIY09_RS30665 | 137264..137795 | + | 532 | Protein_137 | IS3 family transposase ISBvi3 | Transposase |
| NIY09_RS30670 | 137858..137998 | + | 141 | WP_080569432.1 | integrase | - |
| NIY09_RS30675 | 138257..138547 | - | 291 | WP_230674603.1 | IS6 family transposase ISBj7 | Transposase |
| NIY09_RS30680 | 138740..139027 | - | 288 | WP_017924497.1 | hypothetical protein | - |
| NIY09_RS30685 | 139225..139725 | - | 501 | WP_012734085.1 | hypothetical protein | VF |
| NIY09_RS30690 | 140085..141632 | - | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| NIY09_RS30695 | 141938..142559 | - | 622 | Protein_143 | DDE-type integrase/transposase/recombinase | - |
| NIY09_RS30700 | 142695..143354 | - | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| NIY09_RS30705 | 143457..144239 | + | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| NIY09_RS30715 | 146057..146311 | + | 255 | WP_012734091.1 | antitoxin | - |
| NIY09_RS30720 | 146302..146712 | + | 411 | WP_012734092.1 | type II toxin-antitoxin system VapC family toxin | - |
| NIY09_RS30725 | 146775..147092 | + | 318 | WP_043308427.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|