MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 52685 bp
Accession: NZ_CP100185 Location: 1..52685 Organism: Burkholderia glumae strain R5 Replicon: plasmid pR53p
Accession: NZ_CP100185 Location: 1..52685 Organism: Burkholderia glumae strain R5 Replicon: plasmid pR53p
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIW68_RS30930 | 101..772 | + | 672 | WP_012734035.1 | AAA family ATPase | - |
| NIW68_RS30935 | 772..1737 | + | 966 | WP_012734036.1 | ParB/RepB/Spo0J family partition protein | - |
| NIW68_RS30940 | 2492..3349 | + | 858 | WP_012734037.1 | plasmid replication initiator TrfA | - |
| NIW68_RS30945 | 3613..5117 | + | 1505 | Protein_3 | IS21 family transposase ISLisp1 | Transposase |
| NIW68_RS30950 | 5110..5907 | + | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIW68_RS30955 | 5913..6380 | - | 468 | WP_257820185.1 | patatin-like phospholipase family protein | - |
| NIW68_RS30960 | 6600..6851 | - | 252 | WP_257820188.1 | hypothetical protein | VF |
| NIW68_RS30965 | 6864..7400 | - | 537 | WP_257820192.1 | hypothetical protein | - |
| NIW68_RS30970 | 7408..8043 | - | 636 | WP_252836626.1 | hypothetical protein | - |
| NIW68_RS30975 | 8055..8306 | - | 252 | WP_012735338.1 | hypothetical protein | VF |
| NIW68_RS30980 | 8319..8867 | - | 549 | WP_252836627.1 | hypothetical protein | - |
| NIW68_RS30985 | 8978..11821 | - | 2844 | WP_252836628.1 | glycosyl hydrolase 108 family protein | - |
| NIW68_RS30990 | 11874..14381 | - | 2508 | WP_257820195.1 | type VI secretion system Vgr family protein | - |
| NIW68_RS30995 | 14788..15516 | - | 729 | WP_012732865.1 | IS6 family transposase ISDge13 | Transposase |
| NIW68_RS31000 | 15983..16666 | + | 684 | WP_043308718.1 | hypothetical protein | - |
| NIW68_RS31005 | 16663..18174 | + | 1512 | WP_050811485.1 | hypothetical protein | - |
| NIW68_RS31010 | 18260..18529 | + | 270 | WP_012735343.1 | hypothetical protein | - |
| NIW68_RS31015 | 18689..19303 | + | 615 | Protein_17 | error-prone DNA polymerase | - |
| NIW68_RS31020 | 19319..19606 | + | 288 | WP_012735344.1 | hypothetical protein | - |
| NIW68_RS31025 | 20710..20904 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| NIW68_RS31030 | 20959..21201 | - | 243 | WP_012735345.1 | hypothetical protein | - |
| NIW68_RS31035 | 21219..21782 | - | 564 | WP_012735346.1 | hypothetical protein | - |
| NIW68_RS31040 | 21797..22198 | - | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIW68_RS31045 | 22198..22434 | - | 237 | WP_012735348.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIW68_RS31050 | 22771..23460 | - | 690 | WP_257739423.1 | hypothetical protein | - |
| NIW68_RS31055 | 23547..25373 | - | 1827 | WP_012735349.1 | site-specific integrase | - |
| NIW68_RS31060 | 25370..25750 | - | 381 | WP_080569442.1 | hypothetical protein | - |
| NIW68_RS31065 | 25753..26070 | - | 318 | WP_050811486.1 | hypothetical protein | - |
| NIW68_RS31070 | 26121..27209 | - | 1089 | Protein_28 | hypothetical protein | - |
| NIW68_RS31075 | 27220..27483 | - | 264 | WP_148271091.1 | hypothetical protein | - |
| NIW68_RS31080 | 27533..27766 | - | 234 | WP_043308726.1 | hypothetical protein | - |
| NIW68_RS31085 | 27773..28069 | - | 297 | WP_043308728.1 | hypothetical protein | - |
| NIW68_RS31090 | 28919..29724 | + | 806 | WP_085962450.1 | IS5 family transposase IS1421 | Transposase |
| NIW68_RS31095 | 29871..30653 | - | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| NIW68_RS31100 | 30756..31415 | + | 660 | WP_012734087.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| NIW68_RS31105 | 31551..32172 | + | 622 | Protein_35 | DDE-type integrase/transposase/recombinase | - |
| NIW68_RS31110 | 32478..34025 | + | 1548 | WP_012734086.1 | hypothetical protein | VF |
| NIW68_RS31115 | 34586..34903 | + | 318 | Protein_37 | IS21 family transposase ISBcen28 | Transposase |
| NIW68_RS31120 | 35016..36521 | + | 1506 | WP_012732721.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIW68_RS31125 | 36514..37311 | + | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIW68_RS31130 | 37980..38390 | + | 411 | WP_012732719.1 | manganese catalase family protein | - |
| NIW68_RS31135 | 38323..38523 | - | 201 | Protein_41 | DUF892 family protein | - |
| NIW68_RS31140 | 38761..40113 | + | 1353 | WP_012732718.1 | Luminescence regulatory protein LuxO | VF |
| NIW68_RS31145 | 40483..41211 | - | 729 | WP_012732717.1 | IS6 family transposase ISDge13 | Transposase |
| NIW68_RS31150 | 41257..41742 | - | 486 | WP_234038078.1 | hypothetical protein | VF |
| NIW68_RS31155 | 41852..42529 | - | 678 | WP_012732715.1 | hypothetical protein | - |
| NIW68_RS31160 | 42917..43722 | - | 806 | Protein_46 | IS5 family transposase | - |
| NIW68_RS31165 | 43903..44310 | - | 408 | WP_232252319.1 | hypothetical protein | - |
| NIW68_RS31170 | 44503..45320 | + | 818 | WP_085962419.1 | IS5-like element ISBugl2 family transposase | - |
| NIW68_RS31175 | 45330..47194 | - | 1865 | Protein_49 | site-specific integrase | - |
| NIW68_RS31180 | 47166..47507 | - | 342 | WP_012732710.1 | hypothetical protein | - |
| NIW68_RS31185 | 47564..47809 | - | 246 | WP_127913916.1 | hypothetical protein | - |
| NIW68_RS31190 | 47806..48048 | - | 243 | WP_124837682.1 | hypothetical protein | - |
| NIW68_RS31195 | 48062..48346 | - | 285 | WP_017432347.1 | hypothetical protein | - |
| NIW68_RS31200 | 48734..49051 | - | 318 | WP_148271069.1 | hypothetical protein | - |
| NIW68_RS31205 | 49235..49516 | - | 282 | WP_043308454.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIW68_RS31210 | 49520..49975 | - | 456 | WP_012734111.1 | hypothetical protein | - |
| NIW68_RS31215 | 50183..50425 | - | 243 | WP_043308436.1 | hypothetical protein | - |
| NIW68_RS31220 | 50585..50887 | - | 303 | WP_012734112.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIW68_RS31225 | 50877..51122 | - | 246 | WP_012734113.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| NIW68_RS31230 | 51276..51470 | - | 195 | WP_043308437.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|