MGE detailed information
MGE type: Prophage MGE length: 71427 bp
Accession: NZ_CP100137 Location: 796499..867925 Organism: Burkholderia glumae strain R93 Replicon: chromosome
Accession: NZ_CP100137 Location: 796499..867925 Organism: Burkholderia glumae strain R93 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIV78_RS20715 | 792607..793413 | + | 807 | WP_257757836.1 | GTP cyclohydrolase FolE2 | - |
| NIV78_RS20720 | 793488..794528 | - | 1041 | WP_015877621.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| NIV78_RS20725 | 794807..796024 | + | 1218 | WP_015877620.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| NIV78_RS20730 | 796103..796315 | + | 213 | WP_006479415.1 | 30S ribosomal protein S21 | - |
| NIV78_RS20735 | 796499..796945 | + | 447 | WP_015877618.1 | hypothetical protein | VF |
| NIV78_RS20740 | 796998..798884 | + | 1887 | WP_257757837.1 | DNA primase | - |
| NIV78_RS20745 | 798959..799309 | - | 351 | WP_230674369.1 | RNA polymerase subunit sigma | - |
| NIV78_RS20750 | 799251..801431 | + | 2181 | WP_257758063.1 | RNA polymerase sigma factor RpoD | - |
| NIV78_RS20760 | 801669..802850 | - | 1182 | WP_257757838.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NIV78_RS20765 | 802826..803035 | - | 210 | WP_186169210.1 | excisionase | - |
| NIV78_RS20770 | 803038..803175 | - | 138 | WP_251107429.1 | hypothetical protein | - |
| NIV78_RS20775 | 803172..803324 | - | 153 | WP_257757839.1 | hypothetical protein | - |
| NIV78_RS20780 | 803321..803686 | - | 366 | WP_257757840.1 | hypothetical protein | - |
| NIV78_RS20785 | 803683..804402 | - | 720 | WP_257757841.1 | hypothetical protein | - |
| NIV78_RS20790 | 804399..804938 | - | 540 | WP_257757842.1 | hypothetical protein | - |
| NIV78_RS20795 | 804935..805366 | - | 432 | WP_257757846.1 | hypothetical protein | - |
| NIV78_RS20800 | 805350..806543 | - | 1194 | WP_257757847.1 | hypothetical protein | - |
| NIV78_RS20805 | 806540..806905 | - | 366 | WP_257757848.1 | hypothetical protein | - |
| NIV78_RS20810 | 807042..807554 | - | 513 | WP_257757849.1 | siphovirus Gp157 family protein | - |
| NIV78_RS20815 | 807564..808202 | - | 639 | WP_257757851.1 | hypothetical protein | - |
| NIV78_RS20820 | 808216..808878 | - | 663 | WP_251107437.1 | AAA family ATPase | - |
| NIV78_RS20825 | 808957..809118 | - | 162 | WP_257757859.1 | hypothetical protein | - |
| NIV78_RS20830 | 809115..809324 | - | 210 | WP_257757860.1 | hypothetical protein | - |
| NIV78_RS20835 | 809422..809619 | - | 198 | WP_251107440.1 | hypothetical protein | - |
| NIV78_RS20840 | 809621..810043 | - | 423 | WP_257757862.1 | hypothetical protein | - |
| NIV78_RS20845 | 810068..810403 | - | 336 | WP_257757864.1 | hypothetical protein | - |
| NIV78_RS20850 | 810523..811020 | - | 498 | WP_257757865.1 | HNH endonuclease | - |
| NIV78_RS20855 | 811145..811453 | - | 309 | WP_257757866.1 | hypothetical protein | - |
| NIV78_RS20860 | 811455..812168 | - | 714 | WP_257758065.1 | hypothetical protein | - |
| NIV78_RS20865 | 812173..812445 | - | 273 | WP_257757867.1 | hypothetical protein | - |
| NIV78_RS20870 | 812810..813136 | - | 327 | WP_257757868.1 | hypothetical protein | - |
| NIV78_RS20875 | 813858..814058 | + | 201 | WP_257757869.1 | hypothetical protein | - |
| NIV78_RS20880 | 814102..814941 | - | 840 | WP_257757870.1 | hypothetical protein | - |
| NIV78_RS20885 | 814938..815663 | - | 726 | WP_257757871.1 | hypothetical protein | - |
| NIV78_RS20890 | 815705..816454 | - | 750 | WP_257757872.1 | S24 family peptidase | - |
| NIV78_RS20895 | 816540..816779 | + | 240 | WP_257757873.1 | helix-turn-helix domain-containing protein | - |
| NIV78_RS20900 | 816785..817213 | - | 429 | WP_257757875.1 | hypothetical protein | - |
| NIV78_RS20905 | 817303..817488 | + | 186 | WP_257757877.1 | hypothetical protein | - |
| NIV78_RS20910 | 817485..817718 | + | 234 | WP_257757879.1 | hypothetical protein | - |
| NIV78_RS20915 | 817720..817959 | - | 240 | WP_257757881.1 | hypothetical protein | - |
| NIV78_RS20920 | 818049..818366 | + | 318 | WP_257757887.1 | hypothetical protein | - |
| NIV78_RS20925 | 818381..819154 | + | 774 | WP_257757888.1 | hypothetical protein | - |
| NIV78_RS20930 | 819141..819935 | + | 795 | WP_257757889.1 | IS21 family transposase ISMac3 | Transposase |
| NIV78_RS20935 | 819932..820345 | + | 414 | WP_257757890.1 | recombination protein NinB | - |
| NIV78_RS20940 | 820345..820911 | + | 567 | WP_257757891.1 | recombination protein NinG | - |
| NIV78_RS20945 | 820908..821186 | + | 279 | WP_257757892.1 | hypothetical protein | - |
| NIV78_RS20950 | 821734..822114 | + | 381 | WP_257757893.1 | winged helix-turn-helix domain-containing protein | - |
| NIV78_RS20955 | 822126..822557 | + | 432 | WP_257757894.1 | hypothetical protein | - |
| NIV78_RS20960 | 822554..822964 | + | 411 | WP_257757895.1 | hypothetical protein | - |
| NIV78_RS20970 | 823455..823814 | + | 360 | WP_251107465.1 | helix-turn-helix domain-containing protein | - |
| NIV78_RS20975 | 823811..824257 | + | 447 | WP_257757896.1 | hypothetical protein | - |
| NIV78_RS20985 | 825584..826411 | + | 828 | WP_257757897.1 | hypothetical protein | - |
| NIV78_RS20990 | 826412..827866 | + | 1455 | WP_251107467.1 | DUF1073 domain-containing protein | - |
| NIV78_RS20995 | 827909..828706 | + | 798 | WP_257757909.1 | hypothetical protein | - |
| NIV78_RS21000 | 828741..830753 | + | 2013 | WP_257757910.1 | DUF2213 domain-containing protein | - |
| NIV78_RS21005 | 830757..831356 | + | 600 | WP_070105601.1 | hypothetical protein | - |
| NIV78_RS21010 | 831369..832394 | + | 1026 | WP_251107470.1 | DUF2184 domain-containing protein | - |
| NIV78_RS21015 | 832464..832982 | + | 519 | WP_070105603.1 | hypothetical protein | - |
| NIV78_RS21020 | 833014..833442 | + | 429 | WP_251107471.1 | hypothetical protein | - |
| NIV78_RS21025 | 833439..833876 | + | 438 | WP_251119030.1 | hypothetical protein | - |
| NIV78_RS21030 | 833876..834106 | + | 231 | WP_257757911.1 | hypothetical protein | - |
| NIV78_RS21040 | 834973..835752 | + | 780 | WP_257757912.1 | hypothetical protein | - |
| NIV78_RS21045 | 835757..836050 | + | 294 | WP_251107474.1 | hypothetical protein | - |
| NIV78_RS21050 | 836069..837391 | + | 1323 | WP_257757914.1 | hypothetical protein | - |
| NIV78_RS21055 | 837403..837849 | + | 447 | WP_257757915.1 | hypothetical protein | - |
| NIV78_RS21060 | 837849..838433 | + | 585 | WP_244133257.1 | hypothetical protein | - |
| NIV78_RS21065 | 838554..839288 | + | 735 | WP_257757917.1 | hypothetical protein | - |
| NIV78_RS21070 | 839294..840091 | - | 798 | WP_012732720.1 | IS21 family transposase ISPa65 | Transposase |
| NIV78_RS21075 | 840084..841589 | - | 1506 | WP_012732721.1 | IS21 family transposase ISAlisp1 | Transposase |
| NIV78_RS21080 | 841724..842590 | + | 867 | WP_257757919.1 | P63C domain-containing protein | - |
| NIV78_RS21085 | 842702..843121 | - | 420 | WP_257757920.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NIV78_RS21090 | 843192..843377 | - | 186 | WP_251119048.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NIV78_RS21095 | 843543..844076 | - | 534 | WP_257757922.1 | helix-turn-helix transcriptional regulator | - |
| NIV78_RS21100 | 844170..844355 | + | 186 | WP_257757923.1 | Arc family DNA-binding protein | - |
| NIV78_RS21105 | 844376..844693 | + | 318 | WP_257757925.1 | hypothetical protein | - |
| NIV78_RS21110 | 844686..844964 | + | 279 | WP_257757926.1 | hypothetical protein | - |
| NIV78_RS21115 | 844957..845235 | + | 279 | WP_257757928.1 | hypothetical protein | - |
| NIV78_RS21120 | 845228..845890 | + | 663 | WP_257757930.1 | KilA-N domain-containing protein | - |
| NIV78_RS21125 | 845893..846462 | + | 570 | WP_257757932.1 | hypothetical protein | - |
| NIV78_RS21130 | 846459..846914 | + | 456 | WP_251119056.1 | hypothetical protein | - |
| NIV78_RS21135 | 847842..848324 | + | 483 | WP_251119057.1 | hypothetical protein | - |
| NIV78_RS21140 | 848355..848678 | + | 324 | WP_251119058.1 | hypothetical protein | - |
| NIV78_RS21145 | 848685..849200 | + | 516 | WP_251119059.1 | protein-export chaperone SecB | - |
| NIV78_RS21150 | 849513..849770 | + | 258 | WP_251107491.1 | hypothetical protein | - |
| NIV78_RS21155 | 849767..850216 | + | 450 | WP_251119060.1 | glycoside hydrolase family protein | - |
| NIV78_RS21160 | 850277..850525 | + | 249 | WP_257757934.1 | hypothetical protein | - |
| NIV78_RS21165 | 850515..852071 | - | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| NIV78_RS21170 | 852103..852453 | - | 351 | WP_012732753.1 | IS66 family transposase ISBmu30 | Transposase |
| NIV78_RS21175 | 852429..852905 | - | 477 | WP_012734051.1 | IS66 family transposase ISRtr5 | Transposase |
| NIV78_RS21180 | 852969..853250 | + | 282 | WP_257757935.1 | hypothetical protein | - |
| NIV78_RS21185 | 853335..854591 | + | 1257 | WP_012734039.1 | IS21 family transposase ISBcen28 | Transposase |
| NIV78_RS21190 | 854588..855454 | + | 867 | WP_012732871.1 | IS21 family transposase ISBcen28 | Transposase |
| NIV78_RS21195 | 855660..855866 | + | 207 | WP_251119062.1 | hypothetical protein | - |
| NIV78_RS21200 | 855885..856325 | + | 441 | WP_251107495.1 | hypothetical protein | - |
| NIV78_RS21205 | 856954..857209 | - | 256 | Protein_828 | PAAR domain-containing protein | - |
| NIV78_RS21210 | 857307..858511 | + | 1205 | WP_085967296.1 | IS3 family transposase ISBugl1 | Transposase |
| NIV78_RS21215 | 858570..859100 | - | 531 | WP_080630181.1 | hypothetical protein | - |
| NIV78_RS21220 | 859192..859452 | + | 261 | Protein_831 | transposase | - |
| NIV78_RS21225 | 859489..860070 | - | 582 | WP_124837508.1 | hypothetical protein | - |
| NIV78_RS21230 | 860042..862777 | - | 2736 | WP_251107604.1 | cell wall hydrolase | - |
| NIV78_RS21235 | 862830..865337 | - | 2508 | WP_251107603.1 | type VI secretion system Vgr family protein | - |
| NIV78_RS21240 | 865653..865841 | + | 189 | WP_017432642.1 | hypothetical protein | - |
| NIV78_RS21245 | 866613..866861 | - | 249 | WP_012733515.1 | hypothetical protein | - |
| NIV78_RS21250 | 866921..868078 | - | 1158 | WP_257757936.1 | hypothetical protein | - |
| NIV78_RS21255 | 868239..869816 | + | 1578 | WP_257757938.1 | helix-turn-helix transcriptional regulator | - |
| NIV78_RS21260 | 869976..870158 | + | 183 | WP_012733518.1 | CsbD family protein | - |
| NIV78_RS21265 | 870356..871270 | - | 915 | WP_043225534.1 | delta(1)-pyrroline-2-carboxylate reductase family protein | - |
| NIV78_RS21270 | 871485..872102 | - | 618 | WP_232734631.1 | methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|