MGE detailed information
MGE type: Prophage MGE length: 103778 bp
Accession: NZ_CP100136 Location: 2706717..2810494 Organism: Burkholderia glumae strain R93 Replicon: chromosome
Accession: NZ_CP100136 Location: 2706717..2810494 Organism: Burkholderia glumae strain R93 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIV78_RS12625 | 2702818..2705187 | + | 2370 | WP_015876630.1 | EAL domain-containing protein | - |
| NIV78_RS12630 | 2705429..2706631 | + | 1203 | WP_015876631.1 | chromate transporter | - |
| NIV78_RS12635 | 2706717..2707175 | - | 459 | WP_015876632.1 | CopD family protein | - |
| NIV78_RS12640 | 2707437..2709761 | - | 2325 | WP_015876633.1 | DNA topoisomerase IV subunit A | - |
| NIV78_RS12645 | 2709835..2711817 | - | 1983 | WP_015876634.1 | DNA topoisomerase IV subunit B | - |
| NIV78_RS12650 | 2712019..2713986 | - | 1968 | WP_015876635.1 | ATP-binding cassette domain-containing protein | - |
| NIV78_RS12655 | 2714192..2714602 | - | 411 | WP_015876636.1 | DUF4399 domain-containing protein | - |
| NIV78_RS12660 | 2715815..2716423 | + | 609 | WP_252836775.1 | hypothetical protein | - |
| NIV78_RS12665 | 2717328..2717810 | + | 483 | WP_186231237.1 | DUF2778 domain-containing protein | - |
| NIV78_RS12670 | 2717807..2718094 | + | 288 | WP_252836776.1 | hypothetical protein | - |
| NIV78_RS12675 | 2718134..2718919 | - | 786 | WP_257756860.1 | DNA adenine methylase | - |
| NIV78_RS12680 | 2719080..2719703 | - | 624 | WP_252836778.1 | hypothetical protein | - |
| NIV78_RS12685 | 2719706..2720272 | - | 567 | WP_257756862.1 | glycosyl hydrolase 108 family protein | - |
| NIV78_RS12690 | 2720269..2720718 | - | 450 | WP_252836780.1 | hypothetical protein | - |
| NIV78_RS12695 | 2720791..2721840 | - | 1050 | WP_252836781.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| NIV78_RS12700 | 2721850..2722056 | - | 207 | WP_013698666.1 | tail protein X | - |
| NIV78_RS12705 | 2722031..2722909 | - | 879 | WP_257756869.1 | phage tail protein | - |
| NIV78_RS12710 | 2722919..2725348 | - | 2430 | WP_257756870.1 | phage tail tape measure protein | - |
| NIV78_RS12715 | 2725430..2725732 | - | 303 | WP_015876651.1 | phage tail assembly protein | - |
| NIV78_RS12720 | 2725813..2726316 | - | 504 | WP_252836784.1 | phage major tail tube protein | - |
| NIV78_RS12725 | 2726326..2727495 | - | 1170 | WP_257756872.1 | phage tail sheath family protein | - |
| NIV78_RS12730 | 2727567..2728289 | - | 723 | WP_257756873.1 | tail fiber assembly protein | - |
| NIV78_RS12735 | 2728303..2730315 | - | 2013 | WP_257756875.1 | phage tail protein | - |
| NIV78_RS12740 | 2730303..2730881 | - | 579 | WP_252836788.1 | phage tail protein I | - |
| NIV78_RS12745 | 2730871..2731767 | - | 897 | WP_252836789.1 | baseplate J/gp47 family protein | - |
| NIV78_RS12750 | 2731764..2732096 | - | 333 | WP_013698675.1 | GPW/gp25 family protein | - |
| NIV78_RS12755 | 2732099..2732290 | - | 192 | WP_257756877.1 | hypothetical protein | - |
| NIV78_RS12760 | 2732358..2733095 | - | 738 | WP_252836791.1 | hypothetical protein | - |
| NIV78_RS12765 | 2733201..2733881 | - | 681 | WP_015876661.1 | phage baseplate assembly protein V | - |
| NIV78_RS12770 | 2733878..2734408 | - | 531 | WP_252836792.1 | hypothetical protein | - |
| NIV78_RS12775 | 2734398..2734928 | - | 531 | WP_257756880.1 | phage tail protein | - |
| NIV78_RS12780 | 2734932..2735222 | - | 291 | WP_015876664.1 | hypothetical protein | - |
| NIV78_RS12785 | 2735224..2736219 | - | 996 | WP_252836794.1 | major capsid protein | - |
| NIV78_RS12790 | 2736296..2736640 | - | 345 | WP_252836795.1 | head decoration protein | - |
| NIV78_RS12795 | 2736670..2737782 | - | 1113 | WP_257441699.1 | Clp protease ClpP | - |
| NIV78_RS12800 | 2737779..2739269 | - | 1491 | WP_252836797.1 | phage portal protein | - |
| NIV78_RS12805 | 2739266..2739472 | - | 207 | WP_013698685.1 | hypothetical protein | - |
| NIV78_RS12810 | 2739483..2741486 | - | 2004 | WP_252836932.1 | phage terminase large subunit family protein | - |
| NIV78_RS12815 | 2741449..2742018 | - | 570 | WP_252836798.1 | MarR family transcriptional regulator | - |
| NIV78_RS12820 | 2742131..2742325 | - | 195 | WP_013698688.1 | hypothetical protein | - |
| NIV78_RS12825 | 2742573..2743346 | - | 774 | WP_257756882.1 | zinc finger-like domain-containing protein | - |
| NIV78_RS12830 | 2743555..2746056 | - | 2502 | WP_257756883.1 | VapE family protein | - |
| NIV78_RS12835 | 2746215..2746598 | - | 384 | WP_257756884.1 | hypothetical protein | - |
| NIV78_RS12840 | 2746585..2747127 | - | 543 | WP_046579533.1 | hypothetical protein | - |
| NIV78_RS12845 | 2747153..2747386 | - | 234 | WP_257756885.1 | helix-turn-helix domain-containing protein | - |
| NIV78_RS12850 | 2747471..2748013 | + | 543 | WP_257756886.1 | hypothetical protein | - |
| NIV78_RS12855 | 2748374..2748616 | + | 243 | WP_186014791.1 | hypothetical protein | - |
| NIV78_RS12860 | 2748651..2749028 | + | 378 | WP_257756889.1 | beta-hexosaminidase | - |
| NIV78_RS12865 | 2749028..2750404 | + | 1377 | WP_257756890.1 | pyridoxal phosphate biosynthetic protein PdxJ | - |
| NIV78_RS12870 | 2750401..2750868 | + | 468 | WP_257756892.1 | hypothetical protein | - |
| NIV78_RS12875 | 2750852..2751310 | + | 459 | WP_127841020.1 | hypothetical protein | - |
| NIV78_RS12880 | 2751323..2751976 | + | 654 | WP_186028884.1 | ead/Ea22-like family protein | - |
| NIV78_RS12885 | 2751973..2752212 | + | 240 | WP_098153724.1 | hypothetical protein | - |
| NIV78_RS12890 | 2752293..2754482 | - | 2190 | WP_257756895.1 | S8 family peptidase | - |
| NIV78_RS12895 | 2754475..2755704 | - | 1230 | WP_013699005.1 | AAA family ATPase | - |
| NIV78_RS12900 | 2755799..2756956 | - | 1158 | WP_013699006.1 | hypothetical protein ; Integrase | Integrase |
| NIV78_RS12910 | 2757388..2757978 | + | 591 | Protein_2516 | integrase arm-type DNA-binding domain-containing protein | - |
| NIV78_RS12915 | 2758067..2758543 | + | 477 | WP_257756897.1 | IS66 family transposase ISRm2 | Transposase |
| NIV78_RS12920 | 2758519..2758869 | + | 351 | WP_257756898.1 | IS66 family transposase ISBmu30 | Transposase |
| NIV78_RS12925 | 2758901..2760457 | + | 1557 | WP_257756899.1 | IS66 family transposase ISAeh1 | Transposase |
| NIV78_RS12930 | 2760485..2761099 | + | 615 | Protein_2520 | hypothetical protein ; Integrase | Integrase |
| NIV78_RS12935 | 2761533..2762138 | - | 606 | WP_124837013.1 | thioesterase domain-containing protein | - |
| NIV78_RS12940 | 2762135..2762611 | - | 477 | WP_124837014.1 | hypothetical protein | - |
| NIV78_RS12945 | 2762682..2763053 | - | 372 | WP_251107574.1 | hypothetical protein | - |
| NIV78_RS12950 | 2763057..2763581 | - | 525 | WP_251107575.1 | hypothetical protein | - |
| NIV78_RS12955 | 2763667..2764233 | - | 567 | WP_124837751.1 | glycoside hydrolase family 19 protein | - |
| NIV78_RS12960 | 2764230..2764715 | - | 486 | WP_017923118.1 | hypothetical protein | - |
| NIV78_RS12965 | 2764788..2766743 | - | 1956 | WP_257756904.1 | glycoside hydrolase family 55 protein | - |
| NIV78_RS12970 | 2766756..2766983 | - | 228 | WP_017922281.1 | hypothetical protein | - |
| NIV78_RS12975 | 2766994..2767983 | - | 990 | WP_251107503.1 | phage tail protein | - |
| NIV78_RS12980 | 2768002..2768643 | - | 642 | WP_257756906.1 | DUF2313 domain-containing protein | - |
| NIV78_RS12985 | 2768644..2769801 | - | 1158 | WP_257756907.1 | baseplate J/gp47 family protein | - |
| NIV78_RS12990 | 2769801..2770241 | - | 441 | WP_251107505.1 | phage GP46 family protein | - |
| NIV78_RS12995 | 2770305..2770928 | - | 624 | WP_017922276.1 | phage baseplate assembly protein V | - |
| NIV78_RS13000 | 2770925..2772079 | - | 1155 | WP_257756908.1 | Mu P family protein | - |
| NIV78_RS13005 | 2772076..2773506 | - | 1431 | WP_257756910.1 | DNA circularization N-terminal domain-containing protein | - |
| NIV78_RS13010 | 2773517..2775412 | - | 1896 | WP_257756912.1 | hypothetical protein | - |
| NIV78_RS13015 | 2775557..2775895 | - | 339 | WP_039202781.1 | phage tail assembly protein | - |
| NIV78_RS13020 | 2775906..2776277 | - | 372 | WP_017922270.1 | phage tail tube protein | - |
| NIV78_RS13025 | 2776341..2777825 | - | 1485 | WP_257744550.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| NIV78_RS13030 | 2777822..2778022 | - | 201 | WP_017922268.1 | DUF2635 domain-containing protein | - |
| NIV78_RS13035 | 2778032..2778595 | - | 564 | WP_155296963.1 | ATP-binding protein | - |
| NIV78_RS13040 | 2778595..2778915 | - | 321 | WP_017922266.1 | hypothetical protein | - |
| NIV78_RS13045 | 2778917..2779180 | - | 264 | WP_039201369.1 | hypothetical protein | - |
| NIV78_RS13050 | 2779180..2780247 | - | 1068 | WP_017922264.1 | major capsid protein | - |
| NIV78_RS13055 | 2780329..2781006 | - | 678 | WP_257756913.1 | head decoration protein | - |
| NIV78_RS13060 | 2781046..2781663 | - | 618 | WP_017922262.1 | hypothetical protein | - |
| NIV78_RS13065 | 2781682..2782572 | - | 891 | WP_017922261.1 | S49 family peptidase | - |
| NIV78_RS13070 | 2782572..2784203 | - | 1632 | WP_017922260.1 | phage portal protein | - |
| NIV78_RS13075 | 2784203..2784451 | - | 249 | WP_017922259.1 | gpW family head-tail joining protein | - |
| NIV78_RS13080 | 2784468..2786540 | - | 2073 | WP_257756915.1 | phage terminase large subunit family protein | - |
| NIV78_RS13085 | 2786593..2787297 | - | 705 | WP_257756917.1 | hypothetical protein | - |
| NIV78_RS13090 | 2787347..2787592 | - | 246 | WP_257744548.1 | hypothetical protein | - |
| NIV78_RS13095 | 2787579..2787941 | - | 363 | WP_257744547.1 | DUF2591 domain-containing protein | - |
| NIV78_RS13100 | 2787947..2788540 | - | 594 | WP_257756919.1 | hypothetical protein | - |
| NIV78_RS13105 | 2788718..2788900 | + | 183 | WP_257744545.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NIV78_RS13110 | 2788927..2789322 | + | 396 | WP_257756920.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NIV78_RS13115 | 2789540..2789845 | + | 306 | WP_257756922.1 | hypothetical protein | - |
| NIV78_RS13120 | 2789849..2790028 | - | 180 | WP_257756923.1 | hypothetical protein | - |
| NIV78_RS13125 | 2790149..2790580 | - | 432 | WP_157384052.1 | hypothetical protein | - |
| NIV78_RS13130 | 2790573..2791166 | - | 594 | WP_124837745.1 | hypothetical protein | - |
| NIV78_RS13135 | 2791304..2791624 | - | 321 | WP_124837795.1 | hypothetical protein | - |
| NIV78_RS13140 | 2791652..2793451 | - | 1800 | WP_257756925.1 | toprim domain-containing protein | - |
| NIV78_RS13145 | 2793448..2793900 | - | 453 | WP_051415274.1 | HNH endonuclease signature motif containing protein | - |
| NIV78_RS13150 | 2793897..2794778 | - | 882 | WP_257756926.1 | hypothetical protein | - |
| NIV78_RS13155 | 2795140..2795337 | - | 198 | WP_257756927.1 | hypothetical protein | - |
| NIV78_RS13160 | 2795612..2795869 | - | 258 | WP_257756928.1 | transcriptional regulator | - |
| NIV78_RS13165 | 2796003..2797037 | - | 1035 | WP_257756930.1 | hypothetical protein | - |
| NIV78_RS13170 | 2797124..2797489 | - | 366 | WP_257756931.1 | hypothetical protein | - |
| NIV78_RS13175 | 2797482..2798003 | - | 522 | WP_257756932.1 | hypothetical protein | - |
| NIV78_RS13180 | 2797996..2798358 | - | 363 | WP_257756933.1 | hypothetical protein | - |
| NIV78_RS13185 | 2799225..2799560 | + | 336 | WP_257756934.1 | helix-turn-helix domain-containing protein | - |
| NIV78_RS13190 | 2800371..2800592 | - | 222 | WP_124837758.1 | DUF4224 domain-containing protein | - |
| NIV78_RS13195 | 2800608..2801084 | - | 477 | WP_257756936.1 | AlpA family phage regulatory protein | - |
| NIV78_RS13200 | 2801192..2801386 | - | 195 | WP_124837761.1 | type II toxin-antitoxin system HicA family toxin | - |
| NIV78_RS13205 | 2801387..2801620 | - | 234 | WP_017922831.1 | DUF1902 domain-containing protein | - |
| NIV78_RS13210 | 2801809..2801994 | - | 186 | WP_124837763.1 | hypothetical protein | - |
| NIV78_RS13215 | 2802168..2802386 | - | 219 | WP_017922832.1 | hypothetical protein | - |
| NIV78_RS13220 | 2802514..2802696 | - | 183 | WP_017425499.1 | hypothetical protein | - |
| NIV78_RS13225 | 2802831..2803607 | - | 777 | WP_017922833.1 | DUF1828 domain-containing protein | - |
| NIV78_RS13230 | 2803604..2804059 | - | 456 | WP_043225285.1 | hypothetical protein | - |
| NIV78_RS13235 | 2804861..2805727 | - | 867 | WP_012732871.1 | IS21 family transposase ISBcen28 | Transposase |
| NIV78_RS13240 | 2805724..2806980 | - | 1257 | WP_012734039.1 | IS21 family transposase ISBcen28 | Transposase |
| NIV78_RS13245 | 2807106..2807464 | + | 359 | Protein_2583 | hypothetical protein ; Integrase | Integrase |
| NIV78_RS13250 | 2807974..2808813 | + | 840 | WP_015876680.1 | hypothetical protein | - |
| NIV78_RS13255 | 2808817..2809110 | + | 294 | WP_015876681.1 | contact-dependent growth inhibition system immunity protein | - |
| NIV78_RS13260 | 2809451..2810494 | + | 1044 | Protein_2586 | IS3 family transposase | - |
| NIV78_RS13265 | 2811074..2812699 | + | 1626 | WP_257756942.1 | hypothetical protein | - |
| NIV78_RS13270 | 2813242..2814807 | + | 1566 | WP_236577892.1 | ABC transporter substrate-binding protein | - |
| NIV78_RS13275 | 2814905..2815255 | - | 351 | WP_017425494.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|