MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108814 bp
Accession: NZ_CP100079 Location: 1..108814 Organism: Klebsiella pneumoniae strain RJKP36 Replicon: plasmid pRJKP36-3
Accession: NZ_CP100079 Location: 1..108814 Organism: Klebsiella pneumoniae strain RJKP36 Replicon: plasmid pRJKP36-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIL00_RS27950 (NIL00_27935) | 48..665 | - | 618 | Protein_0 | type IV conjugative transfer system lipoprotein TraV | - |
| NIL00_RS27955 (NIL00_27940) | 688..921 | - | 234 | WP_223825638.1 | hypothetical protein | - |
| NIL00_RS27960 (NIL00_27945) | 1088..1489 | - | 402 | Protein_2 | conjugal transfer protein TraP | - |
| NIL00_RS27965 (NIL00_27950) | 1482..2894 | - | 1413 | Protein_3 | conjugal transfer protein TraB | - |
| NIL00_RS27970 (NIL00_27955) | 2894..3571 | - | 678 | Protein_4 | type-F conjugative transfer system secretin TraK | - |
| NIL00_RS27975 (NIL00_27960) | 3620..4179 | - | 560 | Protein_5 | type IV conjugative transfer system protein TraE | - |
| NIL00_RS27980 (NIL00_27965) | 4199..4500 | - | 302 | Protein_6 | type IV conjugative transfer system protein TraL | - |
| NIL00_RS27985 (NIL00_27970) | 4514..4881 | - | 368 | Protein_7 | type IV conjugative transfer system pilin TraA | - |
| NIL00_RS27990 (NIL00_27975) | 4935..5306 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| NIL00_RS27995 (NIL00_27980) | 5390..6085 | - | 696 | WP_126834923.1 | transcriptional regulator TraJ family protein | - |
| NIL00_RS28000 (NIL00_27985) | 6292..6684 | - | 393 | WP_032441878.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIL00_RS28005 (NIL00_27990) | 7119..7602 | + | 484 | Protein_11 | hypothetical protein | VF |
| NIL00_RS28010 (NIL00_27995) | 7635..7960 | - | 326 | Protein_12 | DUF5983 family protein | - |
| NIL00_RS28015 (NIL00_28000) | 7993..8811 | - | 819 | Protein_13 | DUF945 domain-containing protein | - |
| NIL00_RS28020 (NIL00_28005) | 9623..10034 | - | 412 | Protein_14 | helix-turn-helix domain-containing protein | - |
| NIL00_RS28025 (NIL00_28010) | 10035..10313 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| NIL00_RS28030 (NIL00_28015) | 10303..10621 | - | 319 | Protein_16 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIL00_RS28035 (NIL00_28020) | 10702..10926 | - | 225 | WP_014343499.1 | hypothetical protein | - |
| NIL00_RS28040 (NIL00_28025) | 10937..11147 | - | 211 | Protein_18 | hypothetical protein | - |
| NIL00_RS28045 (NIL00_28030) | 11208..11563 | - | 356 | Protein_19 | hypothetical protein | - |
| NIL00_RS28050 (NIL00_28035) | 11880..12029 | + | 150 | WP_264279105.1 | hypothetical protein | - |
| NIL00_RS28055 (NIL00_28040) | 12185..12487 | - | 303 | WP_153932870.1 | hypothetical protein | - |
| NIL00_RS28060 (NIL00_28045) | 12530..12799 | - | 270 | Protein_22 | hypothetical protein | - |
| NIL00_RS28065 (NIL00_28050) | 13482..13597 | - | 116 | Protein_23 | type I toxin-antitoxin system Hok family toxin | - |
| NIL00_RS28070 (NIL00_28055) | 13711..14783 | + | 1073 | Protein_24 | IS481 family transposase | - |
| NIL00_RS28075 (NIL00_28060) | 14960..15332 | - | 373 | Protein_25 | hypothetical protein | - |
| NIL00_RS28080 (NIL00_28065) | 15388..15714 | - | 327 | WP_004152639.1 | hypothetical protein | - |
| NIL00_RS28085 (NIL00_28070) | 15711..16439 | - | 729 | WP_064148031.1 | plasmid SOS inhibition protein A | - |
| NIL00_RS28090 (NIL00_28075) | 16436..16865 | - | 430 | Protein_28 | conjugation system SOS inhibitor PsiB | - |
| NIL00_RS28095 (NIL00_28080) | 16910..18960 | - | 2051 | Protein_29 | ParB/RepB/Spo0J family partition protein | - |
| NIL00_RS28100 (NIL00_28085) | 19030..19278 | - | 249 | WP_004182058.1 | DUF905 domain-containing protein | - |
| NIL00_RS28105 (NIL00_28090) | 19327..19868 | - | 542 | Protein_31 | single-stranded DNA-binding protein | - |
| NIL00_RS28110 (NIL00_28095) | 20690..21248 | - | 559 | Protein_32 | methyltransferase | - |
| NIL00_RS28115 (NIL00_28100) | 21300..22644 | - | 1345 | Protein_33 | DUF3560 domain-containing protein | - |
| NIL00_RS28120 (NIL00_28105) | 22694..22939 | - | 246 | WP_110225350.1 | hypothetical protein | - |
| NIL00_RS28125 (NIL00_28110) | 23014..23241 | - | 228 | WP_004182050.1 | hypothetical protein | - |
| NIL00_RS28130 (NIL00_28115) | 23968..24285 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| NIL00_RS28135 (NIL00_28120) | 24320..24574 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| NIL00_RS28140 (NIL00_28125) | 24770..24946 | - | 177 | Protein_38 | hypothetical protein | - |
| NIL00_RS28145 (NIL00_28130) | 24988..25491 | - | 504 | Protein_39 | antirestriction protein ArdA | - |
| NIL00_RS28150 (NIL00_28135) | 25532..25957 | - | 426 | Protein_40 | antirestriction protein | - |
| NIL00_RS28155 (NIL00_28140) | 26630..27344 | - | 715 | Protein_41 | hypothetical protein | - |
| NIL00_RS28160 (NIL00_28145) | 27447..27865 | - | 419 | Protein_42 | DUF1380 domain-containing protein | - |
| NIL00_RS28165 (NIL00_28150) | 27875..28096 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| NIL00_RS28170 (NIL00_28155) | 28096..28794 | - | 699 | Protein_44 | DNA methylase | - |
| NIL00_RS28175 (NIL00_28160) | 28865..29065 | - | 201 | Protein_45 | hypothetical protein | - |
| NIL00_RS28180 (NIL00_28165) | 29235..29454 | - | 220 | Protein_46 | hypothetical protein | - |
| NIL00_RS28185 (NIL00_28170) | 29517..30187 | - | 671 | Protein_47 | plasmid partitioning/stability family protein | - |
| NIL00_RS28190 (NIL00_28175) | 30190..31156 | - | 967 | Protein_48 | plasmid segregation protein ParM | - |
| NIL00_RS28195 (NIL00_28180) | 31388..31860 | + | 473 | Protein_49 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NIL00_RS28200 (NIL00_28185) | 31817..32575 | + | 759 | Protein_50 | hypothetical protein | - |
| NIL00_RS28205 (NIL00_28190) | 32572..33081 | + | 510 | WP_232254639.1 | DUF4113 domain-containing protein | - |
| NIL00_RS28210 (NIL00_28195) | 33163..34137 | - | 975 | WP_011977819.1 | ParB family protein | - |
| NIL00_RS28215 (NIL00_28200) | 34137..35342 | - | 1206 | WP_011977818.1 | AAA family ATPase | - |
| NIL00_RS28220 (NIL00_28205) | 36452..37318 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| NIL00_RS28225 (NIL00_28210) | 37854..37967 | + | 114 | WP_014343462.1 | hypothetical protein | - |
| NIL00_RS28230 (NIL00_28215) | 38096..38353 | + | 258 | WP_013214010.1 | hypothetical protein | - |
| NIL00_RS28235 (NIL00_28220) | 38399..39178 | - | 780 | WP_013214009.1 | site-specific integrase | - |
| NIL00_RS28240 (NIL00_28225) | 39362..40366 | - | 1005 | WP_011977814.1 | hypothetical protein | - |
| NIL00_RS28245 (NIL00_28230) | 40396..40599 | - | 204 | WP_011977813.1 | hypothetical protein | - |
| NIL00_RS28250 (NIL00_28235) | 40645..41166 | - | 522 | WP_013214008.1 | hypothetical protein | - |
| NIL00_RS28255 (NIL00_28240) | 41224..41616 | - | 393 | WP_011977811.1 | hypothetical protein | - |
| NIL00_RS28260 (NIL00_28245) | 41653..42597 | - | 945 | WP_011977810.1 | hypothetical protein | - |
| NIL00_RS28265 (NIL00_28250) | 42758..43219 | - | 462 | WP_264279106.1 | hypothetical protein | - |
| NIL00_RS28270 (NIL00_28255) | 43176..43406 | + | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIL00_RS28275 (NIL00_28260) | 43403..43819 | + | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIL00_RS28280 (NIL00_28265) | 43893..45455 | + | 1563 | WP_004206609.1 | AAA family ATPase | - |
| NIL00_RS28285 (NIL00_28270) | 45440..46462 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| NIL00_RS28290 (NIL00_28275) | 46718..47414 | + | 697 | WP_024269734.1 | IS1 family transposase ISKpn14 | Transposase |
| NIL00_RS28295 (NIL00_28280) | 47443..47715 | + | 273 | Protein_69 | IS5 family transposase ISPan1 | Transposase |
| NIL00_RS28300 (NIL00_28285) | 47995..48997 | - | 1003 | Protein_70 | IS110 family transposase IS5075 | Transposase |
| NIL00_RS28305 (NIL00_28290) | 49076..49510 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| NIL00_RS28310 (NIL00_28295) | 49582..49932 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| NIL00_RS28315 (NIL00_28300) | 49946..50221 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| NIL00_RS28320 (NIL00_28305) | 50257..50679 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NIL00_RS28325 (NIL00_28310) | 50731..52425 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NIL00_RS28330 (NIL00_28315) | 52443..52805 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NIL00_RS28335 (NIL00_28320) | 52802..53038 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NIL00_RS28340 (NIL00_28325) | 53074..53742 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NIL00_RS28345 (NIL00_28330) | 53817..55067 | + | 1251 | Protein_79 | transposase | - |
| NIL00_RS28350 (NIL00_28335) | 55132..55836 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NIL00_RS28355 (NIL00_28340) | 55888..56349 | + | 462 | Protein_81 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NIL00_RS28360 (NIL00_28345) | 56472..57452 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| NIL00_RS28365 (NIL00_28350) | 57728..58609 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NIL00_RS28370 (NIL00_28355) | 58859..59740 | - | 882 | Protein_84 | IS1182 family transposase ISKpn6 | Transposase |
| NIL00_RS28375 (NIL00_28360) | 59844..60140 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| NIL00_RS28380 (NIL00_28365) | 60186..60341 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| NIL00_RS28385 (NIL00_28370) | 60469..60894 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| NIL00_RS28390 (NIL00_28375) | 61005..61283 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| NIL00_RS28395 (NIL00_28380) | 61817..62434 | - | 618 | Protein_89 | replication protein | - |
| NIL00_RS28400 (NIL00_28385) | 62826..63386 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| NIL00_RS28405 (NIL00_28390) | 63390..66356 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NIL00_RS28410 (NIL00_28395) | 66390..66692 | + | 303 | Protein_92 | IS6 family transposase IS26 | Transposase |
| NIL00_RS28415 (NIL00_28400) | 66894..67367 | - | 474 | WP_013213991.1 | GNAT family N-acetyltransferase | - |
| NIL00_RS28420 (NIL00_28405) | 67787..68299 | - | 513 | Protein_94 | ISL3 family transposase ISEc38 | Transposase |
| NIL00_RS28425 (NIL00_28410) | 68303..68635 | - | 333 | WP_013213994.1 | hypothetical protein | - |
| NIL00_RS28430 (NIL00_28415) | 69021..69932 | - | 912 | WP_013213995.1 | hypothetical protein | - |
| NIL00_RS28435 (NIL00_28420) | 69984..71926 | - | 1943 | Protein_97 | hypothetical protein | - |
| NIL00_RS28440 (NIL00_28425) | 71930..72823 | - | 894 | WP_013213999.1 | hypothetical protein | - |
| NIL00_RS28445 (NIL00_28430) | 72831..74072 | - | 1242 | WP_013213998.1 | N-6 DNA methylase | - |
| NIL00_RS28450 (NIL00_28435) | 75392..76267 | - | 876 | WP_072101968.1 | incFII family plasmid replication initiator RepA | - |
| NIL00_RS28455 (NIL00_28440) | 76565..76822 | - | 258 | WP_015344940.1 | replication regulatory protein RepA | - |
| NIL00_RS28460 (NIL00_28445) | 76954..77505 | - | 552 | WP_015344941.1 | Phospholipase D | VF |
| NIL00_RS28465 (NIL00_28450) | 77607..77914 | - | 308 | Protein_103 | hypothetical protein | - |
| NIL00_RS28470 (NIL00_28455) | 77911..78555 | - | 645 | Protein_104 | DUF2726 domain-containing protein | - |
| NIL00_RS28475 (NIL00_28460) | 78611..79251 | - | 641 | Protein_105 | hypothetical protein | - |
| NIL00_RS28480 (NIL00_28465) | 79300..79900 | - | 601 | Protein_106 | PIN domain-containing protein | - |
| NIL00_RS28485 (NIL00_28470) | 80059..80650 | - | 592 | Protein_107 | fertility inhibition protein FinO | - |
| NIL00_RS28490 (NIL00_28475) | 80722..81447 | - | 726 | WP_015344943.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NIL00_RS28495 (NIL00_28480) | 81490..86729 | - | 5240 | Protein_109 | conjugative transfer relaxase/helicase TraI | - |
| NIL00_RS28500 (NIL00_28485) | 86729..89033 | - | 2305 | Protein_110 | type IV conjugative transfer system coupling protein TraD | - |
| NIL00_RS28505 (NIL00_28490) | 89162..89849 | - | 688 | Protein_111 | hypothetical protein | - |
| NIL00_RS28510 (NIL00_28495) | 90041..90764 | - | 724 | Protein_112 | complement resistance protein TraT | - |
| NIL00_RS28515 (NIL00_28500) | 90950..91483 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| NIL00_RS28520 (NIL00_28505) | 91486..92802 | - | 1317 | WP_264279100.1 | hypothetical protein | - |
| NIL00_RS28525 (NIL00_28510) | 93056..93685 | - | 630 | WP_264279107.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NIL00_RS28530 (NIL00_28515) | 93836..94327 | - | 492 | WP_264279108.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| NIL00_RS28535 (NIL00_28520) | 94328..95703 | - | 1376 | Protein_117 | conjugal transfer protein TraH | - |
| NIL00_RS28540 (NIL00_28525) | 95681..96124 | - | 444 | WP_004194305.1 | F-type conjugal transfer protein TrbF | - |
| NIL00_RS28545 (NIL00_28530) | 96170..96724 | - | 555 | Protein_119 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIL00_RS28550 (NIL00_28535) | 96696..96933 | - | 238 | Protein_120 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIL00_RS28555 (NIL00_28540) | 96944..97694 | - | 751 | Protein_121 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIL00_RS28560 (NIL00_28545) | 97714..98008 | - | 295 | Protein_122 | hypothetical protein | - |
| NIL00_RS28565 (NIL00_28550) | 98050..98296 | - | 247 | Protein_123 | hypothetical protein | - |
| NIL00_RS28570 (NIL00_28555) | 98274..98527 | - | 254 | Protein_124 | conjugal transfer protein TrbE | - |
| NIL00_RS28575 (NIL00_28560) | 98559..100501 | - | 1943 | Protein_125 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIL00_RS28580 (NIL00_28565) | 100560..101198 | - | 639 | WP_069985712.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIL00_RS28585 (NIL00_28570) | 101211..102200 | - | 990 | WP_029497420.1 | conjugal transfer pilus assembly protein TraU | - |
| NIL00_RS28590 (NIL00_28575) | 102197..102598 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| NIL00_RS28595 (NIL00_28580) | 102633..103266 | - | 634 | Protein_129 | type-F conjugative transfer system protein TraW | - |
| NIL00_RS28600 (NIL00_28585) | 103266..103655 | - | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| NIL00_RS28605 (NIL00_28590) | 104196..104627 | - | 432 | WP_264279101.1 | hypothetical protein | - |
| NIL00_RS28610 (NIL00_28595) | 104665..105237 | - | 573 | WP_264279102.1 | DUF5934 domain-containing protein | - |
| NIL00_RS28615 (NIL00_28600) | 105337..106146 | - | 810 | WP_264279103.1 | TraC family protein | - |
| NIL00_RS28620 (NIL00_28605) | 106169..106276 | - | 108 | WP_264279104.1 | traC domain protein | - |
| NIL00_RS28625 (NIL00_28610) | 106348..106745 | - | 398 | Protein_135 | hypothetical protein | - |
| NIL00_RS28630 (NIL00_28615) | 106753..107043 | - | 291 | WP_064291689.1 | hypothetical protein | - |
| NIL00_RS28635 (NIL00_28620) | 107040..107443 | - | 404 | Protein_137 | hypothetical protein | - |
| NIL00_RS28640 (NIL00_28625) | 107510..107826 | - | 317 | Protein_138 | hypothetical protein | - |
| NIL00_RS28645 (NIL00_28630) | 107827..108045 | - | 219 | WP_004171484.1 | hypothetical protein | - |
| NIL00_RS28650 (NIL00_28635) | 108069..108359 | - | 291 | WP_114266782.1 | hypothetical protein | - |
| NIL00_RS28655 (NIL00_28640) | 108364..108774 | - | 411 | WP_064291693.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|