MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP099973 Location: 834403..845758 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE006 Replicon: chromosome
Accession: NZ_CP099973 Location: 834403..845758 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHL55_RS03995 (829849) | 829849..830947 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| NHL55_RS04000 (830957) | 830957..832474 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NHL55_RS04005 (832550) | 832550..833095 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NHL55_RS04010 (833360) | 833360..834118 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| NHL55_RS04020 (834403) | 834403..835209 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| NHL55_RS04025 (835489) | 835489..835740 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| NHL55_RS04030 (835949) | 835949..836176 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NHL55_RS04035 (836176) | 836176..836574 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NHL55_RS04040 (837382) | 837382..837918 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| NHL55_RS04045 (837965) | 837965..838597 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| NHL55_RS04050 (839316) | 839316..839897 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| NHL55_RS04055 (840017) | 840017..842500 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| NHL55_RS04060 (842541) | 842541..843284 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| NHL55_RS04065 (843281) | 843281..844357 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| NHL55_RS04070 (844501) | 844501..845013 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| NHL55_RS04075 (845000) | 845000..845758 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| NHL55_RS04080 (845968) | 845968..846828 | - | 861 | WP_000503684.1 | nickel/cobalt efflux protein RcnA | - |
| NHL55_RS04085 (846950) | 846950..847222 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NHL55_RS04090 (847253) | 847253..848482 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| NHL55_RS04095 (848624) | 848624..849079 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NHL55_RS04100 (849183) | 849183..850046 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |