MGE detailed information
MGE type: Prophage MGE length: 62989 bp
Accession: NZ_CP099973 Location: 2652525..2715513 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE006 Replicon: chromosome
Accession: NZ_CP099973 Location: 2652525..2715513 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain SE006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHL55_RS12965 () | 2648038..2648535 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NHL55_RS12970 () | 2648664..2649947 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NHL55_RS12975 () | 2649916..2652549 | + | 2634 | WP_001529852.1 | PqiB family protein | - |
| NHL55_RS12980 () | 2652627..2654066 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NHL55_RS12985 () | 2654184..2654420 | + | 237 | WP_024131108.1 | YebV family protein | - |
| NHL55_RS12990 () | 2654531..2654722 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| NHL55_RS12995 () | 2654741..2655391 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| NHL55_RS13000 () | 2655615..2655779 | - | 165 | WP_001134856.1 | membrane protein | - |
| NHL55_RS13005 () | 2656064..2656786 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NHL55_RS13010 () | 2657470..2657865 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NHL55_RS13015 () | 2658195..2658671 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| NHL55_RS13020 () | 2659044..2659463 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| NHL55_RS13025 () | 2659836..2660105 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| NHL55_RS13030 () | 2660271..2660411 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| NHL55_RS13035 () | 2660557..2661764 | - | 1208 | Protein_2550 | IS256 family transposase ISEc39 | Transposase |
| NHL55_RS13040 () | 2661834..2662300 | + | 467 | Protein_2551 | tyrosine-type recombinase/integrase | - |
| NHL55_RS13045 () | 2663550..2664464 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| NHL55_RS13050 () | 2664597..2664755 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NHL55_RS13055 () | 2664765..2665379 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| NHL55_RS13060 () | 2665706..2665938 | - | 233 | Protein_2555 | helix-turn-helix domain-containing protein | - |
| NHL55_RS13065 () | 2666547..2666648 | - | 102 | Protein_2556 | arsenic transporter | - |
| NHL55_RS13070 () | 2666639..2666819 | + | 181 | Protein_2557 | IS3 family transposase | - |
| NHL55_RS13075 () | 2667209..2667409 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| NHL55_RS13080 () | 2667506..2668017 | - | 512 | Protein_2559 | tail fiber assembly protein | - |
| NHL55_RS13085 () | 2668030..2668317 | - | 288 | Protein_2560 | macro domain-containing protein | - |
| NHL55_RS13090 () | 2668327..2669558 | - | 1232 | Protein_2561 | tail fiber protein | - |
| NHL55_RS13095 () | 2669557..2670124 | - | 568 | Protein_2562 | phage terminase large subunit family protein | - |
| NHL55_RS13100 () | 2670111..2670602 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| NHL55_RS13105 () | 2670657..2670845 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| NHL55_RS13110 () | 2670910..2671077 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| NHL55_RS13115 () | 2671334..2671867 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| NHL55_RS13120 () | 2671921..2672112 | - | 192 | Protein_2567 | glycoside hydrolase family 19 protein | - |
| NHL55_RS13125 () | 2672101..2672562 | + | 462 | Protein_2568 | DNA breaking-rejoining protein | - |
| NHL55_RS13130 () | 2672826..2673748 | + | 923 | Protein_2569 | hypothetical protein ; Integrase | Integrase |
| NHL55_RS13135 () | 2674693..2675493 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| NHL55_RS13140 () | 2675522..2675763 | - | 242 | Protein_2571 | recombinase family protein | - |
| NHL55_RS13145 () | 2675973..2676695 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| NHL55_RS13150 () | 2676897..2677241 | - | 345 | Protein_2573 | tail fiber assembly protein | - |
| NHL55_RS13155 () | 2677246..2678109 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| NHL55_RS13160 () | 2678149..2680480 | - | 2332 | Protein_2575 | host specificity protein J | - |
| NHL55_RS13165 () | 2680480..2680740 | - | 261 | Protein_2576 | C40 family peptidase | - |
| NHL55_RS13170 () | 2680750..2681445 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| NHL55_RS13175 () | 2681535..2682068 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| NHL55_RS13180 () | 2682185..2682364 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| NHL55_RS13185 () | 2682444..2682755 | - | 312 | Protein_2580 | DUF1441 family protein | - |
| NHL55_RS13190 () | 2682963..2683442 | - | 480 | WP_001541990.1 | lysis protein | - |
| NHL55_RS13195 () | 2683460..2683912 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| NHL55_RS13200 () | 2683896..2684225 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| NHL55_RS13205 () | 2684501..2685187 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| NHL55_RS13210 () | 2685548..2685997 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| NHL55_RS13215 () | 2686371..2686898 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| NHL55_RS13220 () | 2686992..2687681 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| NHL55_RS13225 () | 2687678..2687814 | - | 137 | Protein_2588 | YlcG family protein | - |
| NHL55_RS13230 () | 2687811..2687951 | - | 141 | Protein_2589 | recombination protein NinG | - |
| NHL55_RS13235 () | 2688035..2688634 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| NHL55_RS13240 () | 2688698..2688916 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| NHL55_RS13245 () | 2689218..2689316 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| NHL55_RS13250 () | 2689635..2691614 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| NHL55_RS13255 () | 2692028..2692306 | + | 279 | WP_001575998.1 | excisionase | - |
| NHL55_RS13260 () | 2692281..2693360 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693498..2693643 | + | 146 | - | - | Antitoxin Detail |
| - | 2693500..2693603 | - | 104 | - | - | Toxin Detail |
| NHL55_RS13265 () | 2693743..2694096 | - | 354 | WP_000722370.1 | YebY family protein | - |
| NHL55_RS13270 () | 2694113..2694988 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| NHL55_RS13275 () | 2694989..2695363 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NHL55_RS13280 () | 2695501..2695731 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NHL55_RS13285 () | 2695839..2696495 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| NHL55_RS13290 () | 2696519..2697217 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| NHL55_RS13295 () | 2697254..2699305 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| NHL55_RS13300 () | 2699518..2700177 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| NHL55_RS13305 () | 2700271..2700624 | - | 354 | WP_001042123.1 | protein YebF | - |
| NHL55_RS13310 () | 2700692..2700982 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NHL55_RS13315 () | 2701113..2702291 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NHL55_RS13320 () | 2702391..2703032 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NHL55_RS13325 () | 2703070..2704881 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| NHL55_RS13330 () | 2705116..2706591 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| NHL55_RS13335 () | 2706933..2707802 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| NHL55_RS13340 () | 2707926..2709368 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| NHL55_RS13345 () | 2709441..2710412 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NHL55_RS13350 () | 2710529..2711848 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| NHL55_RS13355 () | 2711864..2712808 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| NHL55_RS13360 () | 2712887..2713642 | + | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| NHL55_RS13365 () | 2713639..2714424 | + | 786 | WP_000571508.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| NHL55_RS13370 () | 2714503..2715513 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| NHL55_RS13375 () | 2715522..2716133 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| NHL55_RS13380 () | 2716493..2717185 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| NHL55_RS13385 () | 2717394..2717993 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| NHL55_RS13390 () | 2717995..2718516 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| NHL55_RS13395 () | 2718553..2719293 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| NHL55_RS13400 () | 2719323..2719775 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|