MGE detailed information
MGE type: Prophage MGE length: 49979 bp
Accession: NZ_CP099907 Location: 2416709..2466687 Organism: Escherichia albertii strain 112_1_EW_A Replicon: chromosome
Accession: NZ_CP099907 Location: 2416709..2466687 Organism: Escherichia albertii strain 112_1_EW_A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY89_RS11905 (2412097) | 2412097..2412807 | + | 711 | WP_095575737.1 | YnfC family lipoprotein | - |
| NIY89_RS11910 (2412810) | 2412810..2413370 | - | 561 | WP_000606224.1 | spermidine N1-acetyltransferase | - |
| NIY89_RS11915 (2413405) | 2413405..2413746 | - | 342 | WP_001066434.1 | DUF1283 family protein | - |
| NIY89_RS11920 (2413881) | 2413881..2414207 | + | 327 | WP_059215949.1 | YnfA family protein | - |
| NIY89_RS11925 (2414404) | 2414404..2415618 | + | 1215 | WP_256876108.1 | starvation-sensing protein RspA | - |
| NIY89_RS11930 (2415632) | 2415632..2416651 | + | 1020 | WP_000836027.1 | Zn-dependent oxidoreductase | - |
| NIY89_RS11935 (2416839) | 2416839..2418119 | - | 1281 | WP_000876986.1 | hypothetical protein ; Integrase | Integrase |
| NIY89_RS11940 (2418154) | 2418154..2418405 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| NIY89_RS11945 (2418478) | 2418478..2420949 | - | 2472 | WP_000048330.1 | exonuclease | - |
| NIY89_RS11950 (2421043) | 2421043..2421234 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| NIY89_RS11955 (2421231) | 2421231..2421419 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NIY89_RS11960 (2421906) | 2421906..2422481 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| NIY89_RS11965 (2422483) | 2422483..2422638 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| NIY89_RS11970 (2422831) | 2422831..2423238 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| NIY89_RS11975 (2423316) | 2423316..2423543 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| NIY89_RS11980 (2423527) | 2423527..2424048 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| NIY89_RS11985 (2424029) | 2424029..2424994 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| NIY89_RS11990 (2425035) | 2425035..2425454 | + | 420 | WP_001151196.1 | DUF977 family protein | - |
| NIY89_RS11995 (2425509) | 2425509..2426558 | + | 1050 | Protein_2344 | ISNCY family transposase ISCARN112 | Transposase |
| NIY89_RS12000 (2426679) | 2426679..2426828 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| NIY89_RS12005 (2427265) | 2427265..2427597 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| NIY89_RS12010 (2427800) | 2427800..2428105 | - | 306 | WP_071527819.1 | protein YdfV | - |
| NIY89_RS12015 (2428130) | 2428130..2428369 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NIY89_RS12020 (2428369) | 2428369..2428656 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NIY89_RS12025 (2428728) | 2428728..2428883 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NIY89_RS12030 (2429100) | 2429100..2429351 | + | 252 | WP_000980994.1 | protein Rem | - |
| NIY89_RS12035 (2429418) | 2429418..2429696 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| NIY89_RS12040 (2429698) | 2429698..2430747 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| NIY89_RS12045 (2430761) | 2430761..2431513 | + | 753 | WP_001047135.1 | antitermination protein | - |
| NIY89_RS12050 (2431791) | 2431791..2431880 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| NIY89_RS12055 (2431935) | 2431935..2432147 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NIY89_RS12060 (2432448) | 2432448..2432663 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NIY89_RS12065 (2433027) | 2433027..2433197 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NIY89_RS12075 (2434753) | 2434753..2434941 | + | 189 | WP_256877802.1 | class II holin family protein | - |
| NIY89_RS12080 (2434998) | 2434998..2436166 | + | 1169 | WP_094249652.1 | IS3 family transposase ISLad1 | Transposase |
| NIY89_RS12085 (2436225) | 2436225..2436536 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| NIY89_RS12090 (2436533) | 2436533..2437066 | + | 534 | WP_001092966.1 | lysozyme | - |
| NIY89_RS12095 (2437063) | 2437063..2437560 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| NIY89_RS12100 (2437924) | 2437924..2438136 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NIY89_RS12105 (2438147) | 2438147..2438335 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| NIY89_RS12110 (2438338) | 2438338..2438403 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| NIY89_RS12115 (2438483) | 2438483..2438638 | + | 156 | WP_001309517.1 | protein YnfN | - |
| NIY89_RS12120 (2438810) | 2438810..2438983 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NIY89_RS12125 (2439135) | 2439135..2439545 | - | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| NIY89_RS12130 (2439846) | 2439846..2440052 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| NIY89_RS12135 (2440625) | 2440625..2441152 | + | 528 | WP_001595800.1 | DUF1441 family protein | - |
| NIY89_RS12140 (2441161) | 2441161..2443260 | + | 2100 | WP_096851820.1 | phage terminase large subunit family protein | - |
| NIY89_RS12145 (2443257) | 2443257..2443469 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| NIY89_RS12150 (2443469) | 2443469..2444977 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| NIY89_RS12155 (2444922) | 2444922..2446949 | + | 2028 | WP_001136593.1 | hypothetical protein | VF |
| NIY89_RS12160 (2447036) | 2447036..2447359 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| NIY89_RS12165 (2447352) | 2447352..2447627 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| NIY89_RS12170 (2447639) | 2447639..2448217 | + | 579 | WP_256876264.1 | phage tail protein | - |
| NIY89_RS12175 (2448214) | 2448214..2448615 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| NIY89_RS12180 (2448626) | 2448626..2449369 | + | 744 | WP_000211129.1 | phage tail protein | - |
| NIY89_RS12185 (2449430) | 2449430..2449816 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| NIY89_RS12190 (2449825) | 2449825..2450154 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| NIY89_RS12195 (2450126) | 2450126..2453191 | + | 3066 | WP_256877707.1 | phage tail tape measure protein | - |
| NIY89_RS12200 (2453191) | 2453191..2453520 | + | 330 | WP_000447248.1 | phage tail protein | - |
| NIY89_RS12205 (2453530) | 2453530..2454228 | + | 699 | WP_061348596.1 | phage minor tail protein L | - |
| NIY89_RS12210 (2454234) | 2454234..2454977 | + | 744 | WP_256877708.1 | C40 family peptidase | - |
| NIY89_RS12215 (2454875) | 2454875..2455522 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| NIY89_RS12220 (2455582) | 2455582..2458995 | + | 3414 | WP_061350801.1 | host specificity protein J | - |
| NIY89_RS12225 (2459066) | 2459066..2459665 | + | 600 | WP_061348595.1 | hypothetical protein | VF |
| NIY89_RS12230 (2459730) | 2459730..2462804 | + | 3075 | WP_072305171.1 | phage tail protein | - |
| NIY89_RS12235 (2462804) | 2462804..2463379 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| NIY89_RS12240 (2463477) | 2463477..2464067 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NIY89_RS12245 (2464385) | 2464385..2464618 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NIY89_RS12250 (2464687) | 2464687..2464800 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NIY89_RS12255 (2465404) | 2465404..2466687 | + | 1284 | Protein_2396 | MHS family MFS transporter | - |
| NIY89_RS12260 (2466776) | 2466776..2468236 | + | 1461 | WP_059225576.1 | mannitol dehydrogenase family protein | - |
| NIY89_RS12265 (2468272) | 2468272..2468475 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NIY89_RS12270 (2468650) | 2468650..2469336 | - | 687 | WP_000215537.1 | DNA-binding transcriptional regulator rspR | - |
| NIY89_RS12275 (2469425) | 2469425..2470171 | - | 747 | WP_002462120.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|