MGE detailed information
MGE type: Prophage MGE length: 66776 bp
Accession: NZ_CP099903 Location: 2356920..2423695 Organism: Escherichia albertii strain 133_1_GWG_A Replicon: chromosome
Accession: NZ_CP099903 Location: 2356920..2423695 Organism: Escherichia albertii strain 133_1_GWG_A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIY95_RS11480 (2353044) | 2353044..2353409 | + | 366 | WP_000276158.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| NIY95_RS11485 (2353396) | 2353396..2353725 | + | 330 | WP_000046655.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| NIY95_RS11490 (2353764) | 2353764..2354585 | - | 822 | WP_001260873.1 | serine protease | - |
| NIY95_RS11495 (2354685) | 2354685..2354768 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| NIY95_RS11500 (2354861) | 2354861..2355136 | - | 276 | WP_072178973.1 | acid resistance repetitive basic protein Asr | - |
| NIY95_RS11505 (2355407) | 2355407..2355511 | + | 105 | WP_212741744.1 | KPN_01571 family protein | - |
| NIY95_RS11510 (2355560) | 2355560..2356813 | - | 1254 | WP_233991647.1 | MFS transporter | - |
| NIY95_RS11515 (2356920) | 2356920..2357814 | + | 895 | Protein_2246 | hypothetical protein | VF |
| NIY95_RS11520 (2357949) | 2357949..2359169 | + | 1221 | WP_000225258.1 | DNA-binding transcriptional repressor Mlc | - |
| NIY95_RS11525 (2359295) | 2359295..2359990 | + | 696 | WP_000919219.1 | dethiobiotin synthase | - |
| NIY95_RS11530 (2359943) | 2359943..2361235 | - | 1293 | WP_071586023.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NIY95_RS11535 (2361391) | 2361391..2362005 | - | 615 | WP_054410585.1 | Tat proofreading chaperone DmsD | - |
| NIY95_RS11540 (2362048) | 2362048..2362905 | - | 858 | WP_059224358.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NIY95_RS11545 (2362907) | 2362907..2363524 | - | 618 | WP_000213046.1 | dimethylsulfoxide reductase subunit B | - |
| NIY95_RS11550 (2363535) | 2363535..2365958 | - | 2424 | WP_072248388.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIY95_RS11555 (2366021) | 2366021..2368447 | - | 2427 | WP_256876107.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIY95_RS11560 (2368691) | 2368691..2368996 | - | 306 | WP_059224354.1 | DUF1161 domain-containing protein | - |
| NIY95_RS11565 (2369104) | 2369104..2369814 | + | 711 | WP_095575737.1 | YnfC family lipoprotein | - |
| NIY95_RS11570 (2369817) | 2369817..2370377 | - | 561 | WP_000606224.1 | spermidine N1-acetyltransferase | - |
| NIY95_RS11575 (2370412) | 2370412..2370753 | - | 342 | WP_001066434.1 | DUF1283 family protein | - |
| NIY95_RS11580 (2370888) | 2370888..2371214 | + | 327 | WP_059215949.1 | YnfA family protein | - |
| NIY95_RS11585 (2371411) | 2371411..2372625 | + | 1215 | WP_256876108.1 | starvation-sensing protein RspA | - |
| NIY95_RS11590 (2372639) | 2372639..2373658 | + | 1020 | WP_000836027.1 | Zn-dependent oxidoreductase | - |
| NIY95_RS11595 (2373846) | 2373846..2375126 | - | 1281 | WP_000876986.1 | hypothetical protein ; Integrase | Integrase |
| NIY95_RS11600 (2375161) | 2375161..2375412 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| NIY95_RS11605 (2375485) | 2375485..2377956 | - | 2472 | WP_000048330.1 | exonuclease | - |
| NIY95_RS11610 (2378050) | 2378050..2378241 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| NIY95_RS11615 (2378238) | 2378238..2378426 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NIY95_RS11620 (2378913) | 2378913..2379488 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| NIY95_RS11625 (2379490) | 2379490..2379645 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| NIY95_RS11630 (2379838) | 2379838..2380245 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| NIY95_RS11635 (2380323) | 2380323..2380550 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| NIY95_RS11640 (2380534) | 2380534..2381055 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| NIY95_RS11645 (2381036) | 2381036..2382001 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| NIY95_RS11650 (2382042) | 2382042..2382461 | + | 420 | WP_001151196.1 | DUF977 family protein | - |
| NIY95_RS11655 (2382516) | 2382516..2383565 | + | 1050 | Protein_2274 | ISNCY family transposase ISCARN112 | Transposase |
| NIY95_RS11660 (2383686) | 2383686..2383835 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| NIY95_RS11665 (2384272) | 2384272..2384604 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| NIY95_RS11670 (2384807) | 2384807..2385112 | - | 306 | WP_071527819.1 | protein YdfV | - |
| NIY95_RS11675 (2385137) | 2385137..2385376 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NIY95_RS11680 (2385376) | 2385376..2385663 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NIY95_RS11685 (2385735) | 2385735..2385890 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NIY95_RS11690 (2386107) | 2386107..2386358 | + | 252 | WP_000980994.1 | protein Rem | - |
| NIY95_RS11695 (2386425) | 2386425..2386703 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| NIY95_RS11700 (2386705) | 2386705..2387754 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| NIY95_RS11705 (2387768) | 2387768..2388520 | + | 753 | WP_001047135.1 | antitermination protein | - |
| NIY95_RS11710 (2388798) | 2388798..2388887 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| NIY95_RS11715 (2388942) | 2388942..2389154 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NIY95_RS11720 (2389455) | 2389455..2389670 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NIY95_RS11725 (2390034) | 2390034..2390204 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NIY95_RS11735 (2391760) | 2391760..2391948 | + | 189 | WP_256877802.1 | class II holin family protein | - |
| NIY95_RS11740 (2392005) | 2392005..2393173 | + | 1169 | WP_094249652.1 | IS3 family transposase ISLad1 | Transposase |
| NIY95_RS11745 (2393232) | 2393232..2393543 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| NIY95_RS11750 (2393540) | 2393540..2394073 | + | 534 | WP_001092966.1 | lysozyme | - |
| NIY95_RS11755 (2394070) | 2394070..2394567 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| NIY95_RS11760 (2394931) | 2394931..2395143 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NIY95_RS11765 (2395154) | 2395154..2395342 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| NIY95_RS11770 (2395345) | 2395345..2395410 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| NIY95_RS11775 (2395490) | 2395490..2395645 | + | 156 | WP_001309517.1 | protein YnfN | - |
| NIY95_RS11780 (2395817) | 2395817..2395990 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NIY95_RS11785 (2396142) | 2396142..2396552 | - | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| NIY95_RS11790 (2396853) | 2396853..2397059 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| NIY95_RS11795 (2397632) | 2397632..2398159 | + | 528 | WP_001595800.1 | DUF1441 family protein | - |
| NIY95_RS11800 (2398168) | 2398168..2400268 | + | 2101 | Protein_2303 | phage terminase large subunit family protein | - |
| NIY95_RS11805 (2400265) | 2400265..2400477 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| NIY95_RS11810 (2400477) | 2400477..2401985 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| NIY95_RS11815 (2401930) | 2401930..2403957 | + | 2028 | WP_001136593.1 | hypothetical protein | VF |
| NIY95_RS11820 (2404044) | 2404044..2404367 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| NIY95_RS11825 (2404360) | 2404360..2404635 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| NIY95_RS11830 (2404647) | 2404647..2405225 | + | 579 | WP_256876264.1 | phage tail protein | - |
| NIY95_RS11835 (2405222) | 2405222..2405623 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| NIY95_RS11840 (2405634) | 2405634..2406377 | + | 744 | WP_000211129.1 | phage tail protein | - |
| NIY95_RS11845 (2406438) | 2406438..2406824 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| NIY95_RS11850 (2406833) | 2406833..2407162 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| NIY95_RS11855 (2407134) | 2407134..2410199 | + | 3066 | WP_256880866.1 | phage tail tape measure protein | - |
| NIY95_RS11860 (2410199) | 2410199..2410528 | + | 330 | WP_000447248.1 | phage tail protein | - |
| NIY95_RS11865 (2410538) | 2410538..2411236 | + | 699 | WP_061348596.1 | phage minor tail protein L | - |
| NIY95_RS11870 (2411242) | 2411242..2411985 | + | 744 | WP_256877708.1 | C40 family peptidase | - |
| NIY95_RS11875 (2411883) | 2411883..2412530 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| NIY95_RS11880 (2412590) | 2412590..2416003 | + | 3414 | WP_061350801.1 | host specificity protein J | - |
| NIY95_RS11885 (2416074) | 2416074..2416673 | + | 600 | WP_256880865.1 | hypothetical protein | VF |
| NIY95_RS11890 (2416738) | 2416738..2419812 | + | 3075 | WP_072305171.1 | phage tail protein | - |
| NIY95_RS11895 (2419812) | 2419812..2420387 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| NIY95_RS11900 (2420485) | 2420485..2421075 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NIY95_RS11905 (2421393) | 2421393..2421626 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NIY95_RS11910 (2421695) | 2421695..2421808 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NIY95_RS11915 (2422412) | 2422412..2423695 | + | 1284 | Protein_2326 | MHS family MFS transporter | - |
| NIY95_RS11920 (2423784) | 2423784..2425244 | + | 1461 | WP_059225576.1 | mannitol dehydrogenase family protein | - |
| NIY95_RS11925 (2425280) | 2425280..2425483 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NIY95_RS11930 (2425658) | 2425658..2426344 | - | 687 | WP_000215537.1 | DNA-binding transcriptional regulator rspR | - |
| NIY95_RS11935 (2426433) | 2426433..2427179 | - | 747 | WP_002462120.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|