MGE detailed information
MGE type: Prophage MGE length: 61647 bp
Accession: NZ_CP099883 Location: 1911628..1973274 Organism: Escherichia albertii strain 231_1_NP_B Replicon: chromosome
Accession: NZ_CP099883 Location: 1911628..1973274 Organism: Escherichia albertii strain 231_1_NP_B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ20_RS09140 (1908144) | 1908144..1908890 | + | 747 | WP_002462120.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| NIZ20_RS09145 (1908979) | 1908979..1909665 | + | 687 | WP_000215537.1 | DNA-binding transcriptional regulator rspR | - |
| NIZ20_RS09150 (1909840) | 1909840..1910043 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NIZ20_RS09155 (1910079) | 1910079..1911539 | - | 1461 | WP_059225576.1 | mannitol dehydrogenase family protein | - |
| NIZ20_RS09160 (1911628) | 1911628..1912911 | - | 1284 | Protein_1785 | MHS family MFS transporter | - |
| NIZ20_RS09165 (1913515) | 1913515..1913628 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NIZ20_RS09170 (1913697) | 1913697..1913930 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NIZ20_RS09175 (1914248) | 1914248..1914838 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NIZ20_RS09180 (1914936) | 1914936..1915511 | - | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| NIZ20_RS09185 (1915511) | 1915511..1918585 | - | 3075 | WP_072305171.1 | phage tail protein | - |
| NIZ20_RS09190 (1918650) | 1918650..1919249 | - | 600 | WP_256880865.1 | Outer membrane protein X | VF |
| NIZ20_RS09195 (1919320) | 1919320..1922733 | - | 3414 | WP_061350801.1 | host specificity protein J | - |
| NIZ20_RS09200 (1922793) | 1922793..1923440 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| NIZ20_RS09205 (1923338) | 1923338..1924081 | - | 744 | WP_256877708.1 | C40 family peptidase | - |
| NIZ20_RS09210 (1924087) | 1924087..1924785 | - | 699 | WP_061348596.1 | phage minor tail protein L | - |
| NIZ20_RS09215 (1924795) | 1924795..1925124 | - | 330 | WP_000447248.1 | phage tail protein | - |
| NIZ20_RS09220 (1925124) | 1925124..1928189 | - | 3066 | WP_256880866.1 | phage tail tape measure protein | - |
| NIZ20_RS09225 (1928161) | 1928161..1928490 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| NIZ20_RS09230 (1928499) | 1928499..1928885 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| NIZ20_RS09235 (1928946) | 1928946..1929689 | - | 744 | WP_000211129.1 | phage tail protein | - |
| NIZ20_RS09240 (1929700) | 1929700..1930101 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| NIZ20_RS09245 (1930098) | 1930098..1930676 | - | 579 | WP_256876264.1 | phage tail protein | - |
| NIZ20_RS09250 (1930688) | 1930688..1930963 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| NIZ20_RS09255 (1930956) | 1930956..1931279 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| NIZ20_RS09260 (1931366) | 1931366..1933393 | - | 2028 | WP_001136593.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| NIZ20_RS09265 (1933338) | 1933338..1934846 | - | 1509 | WP_000985929.1 | phage portal protein | - |
| NIZ20_RS09270 (1934846) | 1934846..1935058 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| NIZ20_RS09275 (1935055) | 1935055..1937154 | - | 2100 | WP_096851820.1 | phage terminase large subunit family protein | - |
| NIZ20_RS09280 (1937163) | 1937163..1937690 | - | 528 | WP_001595800.1 | DUF1441 family protein | - |
| NIZ20_RS09285 (1938263) | 1938263..1938469 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| NIZ20_RS09290 (1938770) | 1938770..1939180 | + | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| NIZ20_RS09295 (1939332) | 1939332..1939505 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NIZ20_RS09300 (1939677) | 1939677..1939832 | - | 156 | WP_001309517.1 | protein YnfN | - |
| NIZ20_RS09305 (1939912) | 1939912..1939977 | - | 66 | WP_122134696.1 | small protein YnfR | - |
| NIZ20_RS09310 (1939980) | 1939980..1940168 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| NIZ20_RS09315 (1940179) | 1940179..1940391 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NIZ20_RS09320 (1940755) | 1940755..1941252 | - | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| NIZ20_RS09325 (1941249) | 1941249..1941782 | - | 534 | WP_001092966.1 | lysozyme | - |
| NIZ20_RS09330 (1941779) | 1941779..1942090 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| NIZ20_RS09340 (1943374) | 1943374..1943562 | - | 189 | WP_256877802.1 | class II holin family protein | - |
| NIZ20_RS09345 (1943788) | 1943788..1945016 | + | 1229 | WP_256876296.1 | IS3 family transposase IS2 | Transposase |
| NIZ20_RS09350 (1945118) | 1945118..1945288 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NIZ20_RS09355 (1945652) | 1945652..1945867 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NIZ20_RS09360 (1946168) | 1946168..1946380 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NIZ20_RS09365 (1946435) | 1946435..1946524 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| NIZ20_RS09370 (1946802) | 1946802..1947554 | - | 753 | WP_001047135.1 | antitermination protein | - |
| NIZ20_RS09375 (1947568) | 1947568..1948617 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| NIZ20_RS09380 (1948619) | 1948619..1948897 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| NIZ20_RS09385 (1948964) | 1948964..1949215 | - | 252 | WP_000980994.1 | protein Rem | - |
| NIZ20_RS09390 (1949432) | 1949432..1949587 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NIZ20_RS09395 (1949659) | 1949659..1949946 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NIZ20_RS09400 (1949946) | 1949946..1950185 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NIZ20_RS09405 (1950210) | 1950210..1950515 | + | 306 | WP_071527819.1 | protein YdfV | - |
| NIZ20_RS09410 (1950718) | 1950718..1951050 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| NIZ20_RS09415 (1951487) | 1951487..1951636 | - | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| NIZ20_RS09420 (1951709) | 1951709..1952806 | - | 1098 | Protein_1837 | ISNCY family transposase ISCARN112 | Transposase |
| NIZ20_RS09425 (1952861) | 1952861..1953280 | - | 420 | WP_001151196.1 | DUF977 family protein | - |
| NIZ20_RS09430 (1953321) | 1953321..1954286 | - | 966 | WP_000054504.1 | hypothetical protein | - |
| NIZ20_RS09435 (1954267) | 1954267..1954788 | - | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| NIZ20_RS09440 (1954772) | 1954772..1954999 | - | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| NIZ20_RS09445 (1955077) | 1955077..1955484 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| NIZ20_RS09450 (1955677) | 1955677..1955832 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| NIZ20_RS09455 (1955834) | 1955834..1956409 | + | 576 | WP_000344954.1 | hypothetical protein | - |
| NIZ20_RS09460 (1956896) | 1956896..1957084 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NIZ20_RS09465 (1957081) | 1957081..1957272 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| NIZ20_RS09470 (1957366) | 1957366..1959837 | + | 2472 | WP_000048330.1 | exonuclease | - |
| NIZ20_RS09475 (1959910) | 1959910..1960161 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| NIZ20_RS09480 (1960196) | 1960196..1961476 | + | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NIZ20_RS09485 (1961664) | 1961664..1962683 | - | 1020 | WP_000836027.1 | Zn-dependent oxidoreductase | - |
| NIZ20_RS09490 (1962697) | 1962697..1963911 | - | 1215 | WP_256876108.1 | starvation-sensing protein RspA | - |
| NIZ20_RS09495 (1964108) | 1964108..1964434 | - | 327 | WP_059215949.1 | YnfA family protein | - |
| NIZ20_RS09500 (1964569) | 1964569..1964910 | + | 342 | WP_001066434.1 | DUF1283 family protein | - |
| NIZ20_RS09505 (1964945) | 1964945..1965505 | + | 561 | WP_000606224.1 | spermidine N1-acetyltransferase | - |
| NIZ20_RS09510 (1965508) | 1965508..1966218 | - | 711 | WP_095575737.1 | YnfC family lipoprotein | - |
| NIZ20_RS09515 (1966326) | 1966326..1966631 | + | 306 | WP_059224354.1 | DUF1161 domain-containing protein | - |
| NIZ20_RS09520 (1966875) | 1966875..1969301 | + | 2427 | WP_256876107.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIZ20_RS09525 (1969364) | 1969364..1971787 | + | 2424 | WP_072248388.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIZ20_RS09530 (1971798) | 1971798..1972415 | + | 618 | WP_000213046.1 | dimethylsulfoxide reductase subunit B | - |
| NIZ20_RS09535 (1972417) | 1972417..1973274 | + | 858 | WP_059224358.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NIZ20_RS09540 (1973317) | 1973317..1973931 | + | 615 | WP_054410585.1 | Tat proofreading chaperone DmsD | - |
| NIZ20_RS09545 (1974087) | 1974087..1975379 | + | 1293 | WP_071586023.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NIZ20_RS09550 (1975332) | 1975332..1976027 | - | 696 | WP_000919219.1 | dethiobiotin synthase | - |
| NIZ20_RS09555 (1976153) | 1976153..1977373 | - | 1221 | WP_000225258.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|