MGE detailed information
MGE type: Prophage MGE length: 61657 bp
Accession: NZ_CP099880 Location: 2402662..2464318 Organism: Escherichia albertii strain 233_2_GWG_B Replicon: chromosome
Accession: NZ_CP099880 Location: 2402662..2464318 Organism: Escherichia albertii strain 233_2_GWG_B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ21_RS11840 (2398563) | 2398563..2399783 | + | 1221 | WP_000225258.1 | DNA-binding transcriptional repressor Mlc | - |
| NIZ21_RS11845 (2399909) | 2399909..2400604 | + | 696 | WP_000919219.1 | dethiobiotin synthase | - |
| NIZ21_RS11850 (2400557) | 2400557..2401849 | - | 1293 | WP_071586023.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NIZ21_RS11855 (2402005) | 2402005..2402619 | - | 615 | WP_054410585.1 | Tat proofreading chaperone DmsD | - |
| NIZ21_RS11860 (2402662) | 2402662..2403519 | - | 858 | WP_059224358.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NIZ21_RS11865 (2403521) | 2403521..2404138 | - | 618 | WP_000213046.1 | dimethylsulfoxide reductase subunit B | - |
| NIZ21_RS11870 (2404149) | 2404149..2406572 | - | 2424 | WP_072248388.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIZ21_RS11875 (2406635) | 2406635..2409061 | - | 2427 | WP_256876107.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NIZ21_RS11880 (2409305) | 2409305..2409610 | - | 306 | WP_059224354.1 | DUF1161 domain-containing protein | - |
| NIZ21_RS11885 (2409718) | 2409718..2410428 | + | 711 | WP_095575737.1 | YnfC family lipoprotein | - |
| NIZ21_RS11890 (2410431) | 2410431..2410991 | - | 561 | WP_000606224.1 | spermidine N1-acetyltransferase | - |
| NIZ21_RS11895 (2411026) | 2411026..2411367 | - | 342 | WP_001066434.1 | DUF1283 family protein | - |
| NIZ21_RS11900 (2411502) | 2411502..2411828 | + | 327 | WP_059215949.1 | YnfA family protein | - |
| NIZ21_RS11905 (2412025) | 2412025..2413239 | + | 1215 | WP_256876108.1 | starvation-sensing protein RspA | - |
| NIZ21_RS11910 (2413253) | 2413253..2414272 | + | 1020 | WP_000836027.1 | Zn-dependent oxidoreductase | - |
| NIZ21_RS11915 (2414460) | 2414460..2415740 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NIZ21_RS11920 (2415775) | 2415775..2416026 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| NIZ21_RS11925 (2416099) | 2416099..2418570 | - | 2472 | WP_000048330.1 | exonuclease | - |
| NIZ21_RS11930 (2418664) | 2418664..2418855 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| NIZ21_RS11935 (2418852) | 2418852..2419040 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| NIZ21_RS11940 (2419527) | 2419527..2420102 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| NIZ21_RS11945 (2420104) | 2420104..2420259 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| NIZ21_RS11950 (2420452) | 2420452..2420859 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| NIZ21_RS11955 (2420937) | 2420937..2421164 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| NIZ21_RS11960 (2421148) | 2421148..2421669 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| NIZ21_RS11965 (2421650) | 2421650..2422615 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| NIZ21_RS11970 (2422656) | 2422656..2423075 | + | 420 | WP_001151196.1 | DUF977 family protein | - |
| NIZ21_RS11975 (2423130) | 2423130..2424179 | + | 1050 | Protein_2339 | ISNCY family transposase ISCARN112 | Transposase |
| NIZ21_RS11980 (2424300) | 2424300..2424449 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| NIZ21_RS11985 (2424886) | 2424886..2425218 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| NIZ21_RS11990 (2425421) | 2425421..2425726 | - | 306 | WP_071527819.1 | protein YdfV | - |
| NIZ21_RS11995 (2425751) | 2425751..2425990 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| NIZ21_RS12000 (2425990) | 2425990..2426277 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| NIZ21_RS12005 (2426349) | 2426349..2426504 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| NIZ21_RS12010 (2426721) | 2426721..2426972 | + | 252 | WP_000980994.1 | protein Rem | - |
| NIZ21_RS12015 (2427039) | 2427039..2427317 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| NIZ21_RS12020 (2427319) | 2427319..2428368 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| NIZ21_RS12025 (2428382) | 2428382..2429134 | + | 753 | WP_001047135.1 | antitermination protein | - |
| NIZ21_RS12030 (2429412) | 2429412..2429501 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| NIZ21_RS12035 (2429556) | 2429556..2429768 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| NIZ21_RS12040 (2430069) | 2430069..2430284 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| NIZ21_RS12045 (2430648) | 2430648..2430818 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| NIZ21_RS12050 (2430920) | 2430920..2432153 | - | 1234 | Protein_2354 | IS3 family transposase IS2 | Transposase |
| NIZ21_RS12055 (2432379) | 2432379..2432567 | + | 189 | WP_256877802.1 | class II holin family protein | - |
| NIZ21_RS12060 (2432624) | 2432624..2433797 | + | 1174 | Protein_2356 | IS3 family transposase ISLad1 | Transposase |
| NIZ21_RS12065 (2433856) | 2433856..2434167 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| NIZ21_RS12070 (2434164) | 2434164..2434697 | + | 534 | WP_001092966.1 | lysozyme | - |
| NIZ21_RS12075 (2434694) | 2434694..2435191 | + | 498 | WP_001071776.1 | DUF2514 domain-containing protein | - |
| NIZ21_RS12080 (2435555) | 2435555..2435767 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| NIZ21_RS12085 (2435778) | 2435778..2435966 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| NIZ21_RS12090 (2435969) | 2435969..2436034 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| NIZ21_RS12095 (2436114) | 2436114..2436269 | + | 156 | WP_001309517.1 | protein YnfN | - |
| NIZ21_RS12100 (2436441) | 2436441..2436614 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| NIZ21_RS12105 (2436766) | 2436766..2437176 | - | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| NIZ21_RS12110 (2437477) | 2437477..2437683 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| NIZ21_RS12115 (2438256) | 2438256..2438783 | + | 528 | WP_001595800.1 | DUF1441 family protein | - |
| NIZ21_RS12120 (2438792) | 2438792..2440891 | + | 2100 | WP_096851820.1 | phage terminase large subunit family protein | - |
| NIZ21_RS12125 (2440888) | 2440888..2441100 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| NIZ21_RS12130 (2441100) | 2441100..2442608 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| NIZ21_RS12135 (2442553) | 2442553..2444580 | + | 2028 | WP_001136593.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| NIZ21_RS12140 (2444667) | 2444667..2444990 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| NIZ21_RS12145 (2444983) | 2444983..2445258 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| NIZ21_RS12150 (2445270) | 2445270..2445848 | + | 579 | WP_256876264.1 | phage tail protein | - |
| NIZ21_RS12155 (2445845) | 2445845..2446246 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| NIZ21_RS12160 (2446257) | 2446257..2447000 | + | 744 | WP_000211129.1 | phage tail protein | - |
| NIZ21_RS12165 (2447061) | 2447061..2447447 | + | 387 | WP_001300035.1 | phage minor tail protein G | - |
| NIZ21_RS12170 (2447456) | 2447456..2447785 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| NIZ21_RS12175 (2447757) | 2447757..2450822 | + | 3066 | WP_256877707.1 | phage tail tape measure protein | - |
| NIZ21_RS12180 (2450822) | 2450822..2451151 | + | 330 | WP_000447248.1 | phage tail protein | - |
| NIZ21_RS12185 (2451161) | 2451161..2451859 | + | 699 | WP_061348596.1 | phage minor tail protein L | - |
| NIZ21_RS12190 (2451865) | 2451865..2452608 | + | 744 | WP_256877708.1 | C40 family peptidase | - |
| NIZ21_RS12195 (2452506) | 2452506..2453153 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| NIZ21_RS12200 (2453213) | 2453213..2456626 | + | 3414 | WP_061350801.1 | host specificity protein J | - |
| NIZ21_RS12205 (2456697) | 2456697..2457296 | + | 600 | WP_061348595.1 | Outer membrane protein X | VF |
| NIZ21_RS12210 (2457361) | 2457361..2460435 | + | 3075 | WP_072305171.1 | phage tail protein | - |
| NIZ21_RS12215 (2460435) | 2460435..2461010 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| NIZ21_RS12220 (2461108) | 2461108..2461698 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NIZ21_RS12225 (2462016) | 2462016..2462249 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| NIZ21_RS12230 (2462318) | 2462318..2462431 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NIZ21_RS12235 (2463035) | 2463035..2464318 | + | 1284 | Protein_2391 | MHS family MFS transporter | - |
| NIZ21_RS12240 (2464407) | 2464407..2465867 | + | 1461 | WP_059225576.1 | mannitol dehydrogenase family protein | - |
| NIZ21_RS12245 (2465903) | 2465903..2466106 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| NIZ21_RS12250 (2466281) | 2466281..2466967 | - | 687 | WP_000215537.1 | DNA-binding transcriptional regulator rspR | - |
| NIZ21_RS12255 (2467056) | 2467056..2467802 | - | 747 | WP_002462120.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|