MGE detailed information
MGE type: Conjugative plasmid MGE length: 37918 bp
Accession: NZ_CP099873 Location: 1..37918 Organism: Escherichia albertii strain 253_2_EW_B Replicon: plasmid plas2
Accession: NZ_CP099873 Location: 1..37918 Organism: Escherichia albertii strain 253_2_EW_B Replicon: plasmid plas2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIZ24_RS23635 (NIZ24_23615) | 2841..3179 | - | 339 | WP_000753495.1 | hypothetical protein | Relaxase |
| NIZ24_RS23640 (NIZ24_23620) | 3524..3946 | + | 423 | WP_256878448.1 | hypothetical protein | - |
| NIZ24_RS23645 (NIZ24_23625) | 3943..4485 | + | 543 | WP_238896424.1 | conjugal transfer protein TraL | - |
| NIZ24_RS23650 (NIZ24_23630) | 4472..4705 | + | 234 | WP_238896426.1 | hypothetical protein | - |
| NIZ24_RS23655 (NIZ24_23635) | 4702..5379 | + | 678 | WP_256878449.1 | hypothetical protein | - |
| NIZ24_RS23660 (NIZ24_23640) | 5435..5873 | - | 439 | Protein_6 | type II toxin-antitoxin system HicB family antitoxin | - |
| NIZ24_RS23665 (NIZ24_23645) | 5898..6078 | - | 181 | Protein_7 | type II toxin-antitoxin system HicA family toxin | - |
| NIZ24_RS23670 (NIZ24_23650) | 6557..6838 | - | 282 | WP_256878450.1 | hypothetical protein | - |
| NIZ24_RS23675 (NIZ24_23655) | 6853..7183 | - | 331 | Protein_9 | hypothetical protein | - |
| NIZ24_RS23680 (NIZ24_23660) | 7625..7867 | - | 243 | WP_001450803.1 | hypothetical protein | Antitoxin Detail |
| NIZ24_RS23685 (NIZ24_23665) | 7857..8123 | - | 267 | WP_000702249.1 | hypothetical protein | Toxin Detail |
| NIZ24_RS23690 (NIZ24_23670) | 8174..8398 | - | 225 | WP_000749828.1 | hypothetical protein | - |
| NIZ24_RS23695 (NIZ24_23675) | 8494..8718 | - | 225 | WP_000866040.1 | hypothetical protein | - |
| NIZ24_RS23700 (NIZ24_23680) | 8758..9081 | - | 324 | WP_000432877.1 | hypothetical protein | - |
| NIZ24_RS23705 (NIZ24_23685) | 10783..11787 | + | 1005 | WP_001208090.1 | replication initiation protein | - |
| NIZ24_RS23710 (NIZ24_23690) | 12161..12499 | - | 339 | WP_000612441.1 | hypothetical protein | VF |
| NIZ24_RS23715 (NIZ24_23695) | 12698..12985 | + | 288 | WP_000332248.1 | helix-turn-helix transcriptional regulator | - |
| NIZ24_RS23720 (NIZ24_23700) | 13026..13259 | - | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| NIZ24_RS23725 (NIZ24_23705) | 13272..13913 | - | 642 | WP_000844300.1 | type IV secretion system protein | - |
| NIZ24_RS23730 (NIZ24_23710) | 13915..14910 | - | 996 | WP_001103652.1 | type IV secretion system protein | - |
| NIZ24_RS23735 (NIZ24_23715) | 15243..15854 | + | 612 | WP_000603936.1 | Type IV secretion system protein virB1 | VF |
| NIZ24_RS23740 (NIZ24_23720) | 15847..16140 | + | 294 | WP_001031682.1 | TrbC/VirB2 family protein | - |
| NIZ24_RS23745 (NIZ24_23725) | 16198..16518 | + | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| NIZ24_RS23750 (NIZ24_23730) | 16521..18893 | + | 2373 | WP_053293934.1 | VirB4 family type IV secretion system protein | - |
| NIZ24_RS23755 (NIZ24_23735) | 19024..19761 | + | 738 | WP_000364523.1 | Type IV secretion system protein PtlE | VF |
| NIZ24_RS23760 (NIZ24_23740) | 19758..20537 | + | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NIZ24_RS23765 (NIZ24_23745) | 20527..21669 | + | 1143 | WP_032351177.1 | Type IV secretion system protein virB10 | VF |
| NIZ24_RS23770 (NIZ24_23750) | 21669..22688 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| NIZ24_RS23775 (NIZ24_23755) | 22739..24706 | + | 1968 | WP_000726942.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NIZ24_RS23780 (NIZ24_23760) | 24722..25027 | + | 306 | WP_001223992.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NIZ24_RS23785 (NIZ24_23765) | 25150..25737 | + | 588 | WP_000280687.1 | DUF6012 family protein | - |
| NIZ24_RS23790 (NIZ24_23770) | 25749..27905 | + | 2157 | WP_001235765.1 | type IA DNA topoisomerase | - |
| NIZ24_RS23795 (NIZ24_23775) | 28112..28375 | - | 264 | WP_000753313.1 | hypothetical protein | - |
| NIZ24_RS23800 (NIZ24_23780) | 28626..29429 | + | 804 | WP_000511688.1 | SprT-like domain-containing protein | - |
| NIZ24_RS23805 (NIZ24_23785) | 29465..29680 | + | 216 | WP_000434156.1 | hypothetical protein | - |
| NIZ24_RS23810 (NIZ24_23790) | 29744..30025 | + | 282 | WP_001105056.1 | hypothetical protein | - |
| NIZ24_RS23815 (NIZ24_23795) | 30333..30812 | - | 480 | WP_000190056.1 | hypothetical protein | - |
| NIZ24_RS23820 (NIZ24_23800) | 30930..31376 | + | 447 | WP_000616195.1 | hypothetical protein | - |
| NIZ24_RS23825 (NIZ24_23805) | 31453..31596 | + | 144 | WP_001251803.1 | hypothetical protein | - |
| NIZ24_RS23830 (NIZ24_23810) | 31966..33468 | + | 1503 | WP_000715077.1 | hypothetical protein | - |
| NIZ24_RS23835 (NIZ24_23815) | 34867..35682 | + | 816 | WP_000018885.1 | Tyrosine recombinase XerD | VF |
| NIZ24_RS23840 (NIZ24_23820) | 35797..36456 | + | 660 | WP_000516225.1 | peptidyl-arginine deiminase | - |
| NIZ24_RS23845 (NIZ24_23825) | 36492..36704 | + | 213 | WP_000955370.1 | hypothetical protein | - |
| NIZ24_RS23850 (NIZ24_23830) | 37161..37463 | + | 303 | WP_001096504.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|