MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 170537 bp
Accession: NZ_CP099835        Location: 1..170537         Organism: Klebsiella quasipneumoniae strain Y7-3       Replicon: plasmid unnamed1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NDO72_RS25420 (NDO72_25420) 270..719 + 450 WP_001023257.1 copper resistance protein -
NDO72_RS25425 (NDO72_25425) 1008..1745 + 738 WP_004182013.1 Murein DD-endopeptidase MepM VF
NDO72_RS25430 (NDO72_25430) 1779..1976 - 198 WP_000843497.1 DUF2933 domain-containing protein -
NDO72_RS25435 (NDO72_25435) 2017..4464 - 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
NDO72_RS25440 (NDO72_25440) 4591..5031 - 441 WP_000758228.1 DUF411 domain-containing protein -
NDO72_RS25445 (NDO72_25445) 5118..8264 - 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
NDO72_RS25450 (NDO72_25450) 8275..9567 - 1293 WP_004098959.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
NDO72_RS25455 (NDO72_25455) 9681..10034 - 354 WP_001246153.1 cation efflux system protein CusF -
NDO72_RS25460 (NDO72_25460) 10063..11448 - 1386 WP_000475512.1 Cation efflux system protein CusC VF
NDO72_RS25465 (NDO72_25465) 11638..12318 + 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
NDO72_RS25470 (NDO72_25470) 12311..13786 + 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
NDO72_RS25475 (NDO72_25475) 14037..14468 + 432 WP_004178091.1 silver-binding protein SilE -
NDO72_RS25480 (NDO72_25480) 14764..15306 - 543 Protein_13 ISL3 family transposase ISKpn25 Transposase
NDO72_RS25485 (NDO72_25485) 15322..15806 - 485 Protein_14 IS1 family transposase IS1X2 Transposase
NDO72_RS25490 (NDO72_25490) 15897..17104 + 1208 WP_085955172.1 IS3 family transposase ISEcl1 Transposase
NDO72_RS25495 (NDO72_25495) 17295..17992 + 698 WP_223174975.1 IS1 family transposase IS1X2 Transposase
NDO72_RS25500 (NDO72_25500) 18144..20141 + 1998 WP_004178088.1 choline BCCT transporter BetT -
NDO72_RS25505 (NDO72_25505) 20204..21481 + 1278 WP_004152070.1 DUF2254 domain-containing protein -
NDO72_RS25510 (NDO72_25510) 22464..23300 - 837 WP_004178087.1 putative cyclic di-GMP phosphodiesterase PdeB VF
NDO72_RS25515 (NDO72_25515) 23364..23879 - 516 Protein_20 putative cyclic di-GMP phosphodiesterase PdeB VF
NDO72_RS25520 (NDO72_25520) 24520..24777 + 258 WP_004197688.1 hypothetical protein -
NDO72_RS25525 (NDO72_25525) 25450..26418 - 969 WP_068814619.1 IS5 family transposase IS903B Transposase
NDO72_RS25530 (NDO72_25530) 26507..26749 + 243 WP_074428705.1 EAL domain-containing protein -
NDO72_RS25535 (NDO72_25535) 26776..27723 - 948 WP_253231047.1 sensor domain-containing diguanylate cyclase -
NDO72_RS25540 (NDO72_25540) 28867..29607 + 741 WP_001515717.1 tyrosine-type recombinase/integrase -
NDO72_RS25545 (NDO72_25545) 30325..31335 - 1011 WP_004182030.1 RepB family plasmid replication initiator protein -
NDO72_RS25550 (NDO72_25550) 32087..33253 + 1167 WP_004182032.1 hypothetical protein VF
NDO72_RS25555 (NDO72_25555) 33253..34224 + 972 WP_004182039.1 ParB/RepB/Spo0J family plasmid partition protein -
NDO72_RS25560 (NDO72_25560) 35267..36383 + 1117 Protein_29 IS3 family transposase ISSen4 Transposase
NDO72_RS25565 (NDO72_25565) 37161..37856 - 696 Protein_30 IS1 family transposase -
NDO72_RS25570 (NDO72_25570) 38824..40104 + 1281 WP_004182042.1 DUF262 domain-containing protein -
NDO72_RS25575 (NDO72_25575) 40101..42053 + 1953 WP_000037308.1 DUF262 domain-containing protein -
NDO72_RS25580 (NDO72_25580) 42298..42549 - 252 WP_004182043.1 hypothetical protein -
NDO72_RS25585 (NDO72_25585) 42628..43900 - 1273 Protein_34 Y-family DNA polymerase -
NDO72_RS25590 (NDO72_25590) 43900..44325 - 426 WP_004182047.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NDO72_RS25595 (NDO72_25595) 44727..46214 + 1488 WP_162934517.1 hypothetical protein VF
NDO72_RS25600 (NDO72_25600) 46273..46623 + 351 Protein_37 conjugal transfer protein TrbJ -
NDO72_RS25605 (NDO72_25605) 46756..46962 + 207 WP_171773970.1 TraY domain-containing protein -
NDO72_RS25610 (NDO72_25610) 47024..47392 + 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
NDO72_RS25615 (NDO72_25615) 47406..47711 + 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
NDO72_RS25620 (NDO72_25620) 47731..48297 + 567 WP_016831035.1 type IV conjugative transfer system protein TraE -
NDO72_RS25625 (NDO72_25625) 48284..49024 + 741 WP_014386193.1 type-F conjugative transfer system secretin TraK -
NDO72_RS25630 (NDO72_25630) 49024..50448 + 1425 WP_016831036.1 F-type conjugal transfer pilus assembly protein TraB -
NDO72_RS25635 (NDO72_25635) 50441..51037 + 597 Protein_44 conjugal transfer protein TraP -
NDO72_RS25640 (NDO72_25640) 51060..51644 + 585 WP_014386196.1 type IV conjugative transfer system lipoprotein TraV -
NDO72_RS25645 (NDO72_25645) 51776..52186 + 411 WP_032409654.1 hypothetical protein -
NDO72_RS25650 (NDO72_25650) 52191..52480 + 290 Protein_47 hypothetical protein -
NDO72_RS25655 (NDO72_25655) 52504..52722 + 219 WP_014386199.1 hypothetical protein -
NDO72_RS25660 (NDO72_25660) 52723..53034 + 312 WP_016831041.1 hypothetical protein -
NDO72_RS25665 (NDO72_25665) 53101..53505 + 405 WP_016831042.1 hypothetical protein -
NDO72_RS25670 (NDO72_25670) 53548..53706 + 159 WP_223178560.1 hypothetical protein -
NDO72_RS25675 (NDO72_25675) 53720..53938 + 219 WP_072196435.1 hypothetical protein -
NDO72_RS25680 (NDO72_25680) 53946..54344 + 399 WP_023158008.1 hypothetical protein -
NDO72_RS25685 (NDO72_25685) 54416..57055 + 2640 WP_253231048.1 type IV secretion system protein TraC -
NDO72_RS25690 (NDO72_25690) 57055..57444 + 390 WP_004167468.1 type-F conjugative transfer system protein TrbI -
NDO72_RS25695 (NDO72_25695) 57444..58079 + 636 WP_016831046.1 type-F conjugative transfer system protein TraW -
NDO72_RS25700 (NDO72_25700) 58114..58515 + 402 WP_016831047.1 hypothetical protein -
NDO72_RS25705 (NDO72_25705) 58512..59501 + 990 WP_015632509.1 conjugal transfer pilus assembly protein TraU -
NDO72_RS25710 (NDO72_25710) 59777..60424 + 648 WP_016831049.1 type-F conjugative transfer system pilin assembly protein TrbC -
NDO72_RS25715 (NDO72_25715) 60483..62438 + 1956 WP_023313940.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
NDO72_RS25720 (NDO72_25720) 62470..62724 + 255 WP_015065558.1 conjugal transfer protein TrbE -
NDO72_RS25725 (NDO72_25725) 62702..62950 + 249 WP_004152675.1 hypothetical protein -
NDO72_RS25730 (NDO72_25730) 62963..63289 + 327 WP_016831051.1 hypothetical protein -
NDO72_RS25735 (NDO72_25735) 63310..64062 + 753 WP_004152677.1 type-F conjugative transfer system pilin assembly protein TraF -
NDO72_RS25740 (NDO72_25740) 64073..64312 + 240 WP_004144400.1 type-F conjugative transfer system pilin chaperone TraQ -
NDO72_RS25745 (NDO72_25745) 64284..64841 + 558 WP_004152678.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
NDO72_RS25750 (NDO72_25750) 64887..65330 + 444 WP_016831053.1 F-type conjugal transfer protein TrbF -
NDO72_RS25755 (NDO72_25755) 65308..66687 + 1380 WP_072159542.1 conjugal transfer pilus assembly protein TraH -
NDO72_RS25760 (NDO72_25760) 66687..69509 + 2823 WP_016831055.1 conjugal transfer mating-pair stabilization protein TraG -
NDO72_RS25765 (NDO72_25765) 69532..70134 + 603 WP_071604857.1 hypothetical protein -
NDO72_RS25770 (NDO72_25770) 70385..71116 + 732 WP_016831056.1 conjugal transfer complement resistance protein TraT -
NDO72_RS25775 (NDO72_25775) 71309..71998 + 690 WP_072159541.1 hypothetical protein -
NDO72_RS25780 (NDO72_25780) 72125..74407 + 2283 WP_253231049.1 type IV conjugative transfer system coupling protein TraD -
NDO72_RS25785 (NDO72_25785) 74407..79665 + 5259 WP_064149594.1 Multifunctional conjugation protein TraI Relaxase
NDO72_RS25790 (NDO72_25790) 79746..80471 + 726 WP_016831060.1 type-F conjugative transfer system pilin acetylase TraX -
NDO72_RS25795 (NDO72_25795) 80543..81139 + 597 WP_016831061.1 fertility inhibition protein FinO -
NDO72_RS25800 (NDO72_25800) 81159..81505 + 347 Protein_77 DUF6404 family protein -
NDO72_RS25805 (NDO72_25805) 81975..82196 + 222 WP_016831063.1 hypothetical protein -
NDO72_RS25810 (NDO72_25810) 82252..82902 + 651 WP_016831064.1 DUF2726 domain-containing protein -
NDO72_RS25815 (NDO72_25815) 82899..83207 + 309 WP_016831065.1 hypothetical protein -
NDO72_RS25820 (NDO72_25820) 83311..83862 + 552 WP_025983260.1 Cardiolipin synthase A VF
NDO72_RS25825 (NDO72_25825) 83998..84267 + 270 WP_016831067.1 replication regulatory protein RepA -
NDO72_RS25830 (NDO72_25830) 84350..84524 + 175 Protein_83 protein CopA/IncA -
NDO72_RS25835 (NDO72_25835) 84709..85722 + 1014 WP_016831068.1 plasmid replication initiator RepA -
NDO72_RS25840 (NDO72_25840) 87048..88079 + 1032 WP_004176137.1 IS630 family transposase ISEc33 Transposase
NDO72_RS25845 (NDO72_25845) 88185..88505 - 321 WP_004197483.1 hypothetical protein -
NDO72_RS25855 (NDO72_25855) 90131..90445 + 315 Protein_88 NAD(P)-dependent oxidoreductase -
NDO72_RS25860 (NDO72_25860) 90990..91388 + 399 WP_228990980.1 DUF2946 domain-containing protein -
NDO72_RS25865 (NDO72_25865) 91471..93534 + 2064 WP_004182117.1 TonB-dependent copper receptor -
NDO72_RS25870 (NDO72_25870) 93591..93851 + 261 WP_023313931.1 DUF2534 family protein -
NDO72_RS25875 (NDO72_25875) 94040..94736 + 697 Protein_92 IS1 family transposase -
NDO72_RS25880 (NDO72_25880) 94751..94891 - 141 Protein_93 galactoside O-acetyltransferase -
NDO72_RS25885 (NDO72_25885) 94957..96210 - 1254 WP_004182120.1 lactose permease -
NDO72_RS25890 (NDO72_25890) 96262..99336 - 3075 WP_004182121.1 beta-galactosidase -
NDO72_RS25895 (NDO72_25895) 99458..100540 - 1083 WP_016831235.1 DNA-binding transcriptional repressor LacI -
NDO72_RS25900 (NDO72_25900) 101001..102011 + 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
NDO72_RS25905 (NDO72_25905) 102435..102632 + 198 WP_072050298.1 EAL domain-containing protein -
NDO72_RS25910 (NDO72_25910) 102661..102888 - 228 Protein_99 IS66 family transposase -
NDO72_RS25915 (NDO72_25915) 102963..103256 - 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
NDO72_RS25920 (NDO72_25920) 103355..104122 - 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
NDO72_RS25925 (NDO72_25925) 104123..105079 - 957 WP_023328280.1 Fe(3+) dicitrate transport system permease protein FecD VF
NDO72_RS25930 (NDO72_25930) 105076..106074 - 999 WP_004182126.1 Fe(3+) dicitrate transport system permease protein FecC VF
NDO72_RS25935 (NDO72_25935) 106071..106973 - 903 WP_253231043.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
NDO72_RS25940 (NDO72_25940) 107018..109342 - 2325 WP_004182128.1 TonB-dependent Fe(3+) dicitrate receptor FecA -
NDO72_RS25945 (NDO72_25945) 109429..110382 - 954 WP_004197067.1 ferric citrate uptake sigma factor regulator FecR -
NDO72_RS25950 (NDO72_25950) 110379..110900 - 522 WP_004197062.1 putative RNA polymerase sigma factor FecI VF
NDO72_RS25955 (NDO72_25955) 111037..111106 + 70 Protein_108 hypothetical protein -
NDO72_RS25960 (NDO72_25960) 111376..111861 - 486 Protein_109 IS21 family transposase ISEc62 Transposase
NDO72_RS25965 (NDO72_25965) 112069..112170 + 102 Protein_110 integrase -
NDO72_RS25970 (NDO72_25970) 112455..113582 + 1128 WP_004118840.1 transporter substrate-binding protein -
NDO72_RS25975 (NDO72_25975) 113579..114172 + 594 WP_253231044.1 ANTAR domain-containing protein -
NDO72_RS25980 (NDO72_25980) 114169..115017 + 849 WP_004118228.1 ABC transporter permease -
NDO72_RS25985 (NDO72_25985) 115017..115937 + 921 WP_004118227.1 ABC transporter permease -
NDO72_RS25990 (NDO72_25990) 115950..117554 + 1605 WP_004152278.1 ABC transporter substrate-binding protein -
NDO72_RS25995 (NDO72_25995) 117599..118546 + 948 WP_004118225.1 acetamidase/formamidase family protein -
NDO72_RS26000 (NDO72_26000) 118554..120287 + 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
NDO72_RS26005 (NDO72_26005) 120526..120687 + 162 WP_023157916.1 creatininase family protein -
NDO72_RS26010 (NDO72_26010) 120660..120836 + 177 WP_227599551.1 creatininase family protein -
NDO72_RS26015 (NDO72_26015) 121528..122029 + 502 Protein_120 DUF2913 family protein -
NDO72_RS26020 (NDO72_26020) 122198..123166 + 969 WP_072143344.1 IS5 family transposase IS903B Transposase
NDO72_RS26025 (NDO72_26025) 123223..123603 + 381 Protein_122 integrase core domain-containing protein -
NDO72_RS26030 (NDO72_26030) 123647..124201 - 555 Protein_123 IS91 family transposase IS1294 Transposase
NDO72_RS26035 (NDO72_26035) 124256..125026 - 771 Protein_124 Regulator of RpoS VF
NDO72_RS26040 (NDO72_26040) 125046..128426 - 3381 WP_004181991.1 Sensor histidine kinase RcsC VF
NDO72_RS26045 (NDO72_26045) 128749..129921 + 1173 WP_253231050.1 urea ABC transporter substrate-binding protein -
NDO72_RS26050 (NDO72_26050) 129978..130904 + 927 WP_004181993.1 urea ABC transporter permease subunit UrtB -
NDO72_RS26055 (NDO72_26055) 130914..132029 + 1116 WP_004181994.1 urea ABC transporter permease subunit UrtC -
NDO72_RS26060 (NDO72_26060) 132026..132775 + 750 WP_004181995.1 urea ABC transporter ATP-binding protein UrtD -
NDO72_RS26065 (NDO72_26065) 132786..133475 + 690 WP_253231045.1 urea ABC transporter ATP-binding subunit UrtE -
NDO72_RS26070 (NDO72_26070) 133511..134518 + 1008 WP_004181997.1 formamidase -
NDO72_RS26080 (NDO72_26080) 135608..135724 - 117 Protein_133 transposase domain-containing protein -
NDO72_RS26085 (NDO72_26085) 135669..135932 - 264 WP_004118209.1 IS66 family transposase ISPpu19 Transposase
NDO72_RS26090 (NDO72_26090) 135947..136210 + 264 WP_004118208.1 hypothetical protein -
NDO72_RS26095 (NDO72_26095) 136454..136735 + 282 WP_004152118.1 helix-turn-helix domain-containing protein -
NDO72_RS26100 (NDO72_26100) 136770..137339 + 570 WP_004181999.1 hypothetical protein VF
NDO72_RS26105 (NDO72_26105) 137463..140258 + 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
NDO72_RS26110 (NDO72_26110) 140258..140455 + 198 WP_004152115.1 hypothetical protein -
NDO72_RS26115 (NDO72_26115) 140693..140839 + 147 Protein_140 diguanylate cyclase -
NDO72_RS26120 (NDO72_26120) 140954..141442 + 489 WP_004152114.1 phosphate-starvation-inducible PsiE family protein -
NDO72_RS26125 (NDO72_26125) 141429..142391 + 963 WP_004152113.1 zinc metalloprotease HtpX -
NDO72_RS26130 (NDO72_26130) 142568..143733 + 1166 Protein_143 IS3 family transposase ISKpn38 Transposase
NDO72_RS26135 (NDO72_26135) 143937..144935 + 999 WP_001610306.1 hypothetical protein -
NDO72_RS26140 (NDO72_26140) 144939..145856 + 918 WP_158003452.1 S-4TM family putative pore-forming effector -
NDO72_RS26145 (NDO72_26145) 145887..147290 - 1404 WP_253231046.1 ISNCY family transposase ISKpn21 Transposase
NDO72_RS26150 (NDO72_26150) 147469..147951 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
NDO72_RS26155 (NDO72_26155) 147939..148205 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
NDO72_RS26160 (NDO72_26160) 148381..148635 - 255 WP_004152108.1 hypothetical protein -
NDO72_RS26165 (NDO72_26165) 148711..148968 - 258 WP_004152107.1 hypothetical protein -
NDO72_RS26170 (NDO72_26170) 149017..149220 - 204 WP_004152106.1 HHA domain-containing protein -
NDO72_RS26175 (NDO72_26175) 149254..149622 - 369 WP_004152105.1 hypothetical protein -
NDO72_RS26180 (NDO72_26180) 149666..150160 - 495 WP_004152104.1 DNA-binding protein -
NDO72_RS26185 (NDO72_26185) 150191..150766 - 576 WP_004152103.1 hypothetical protein -
NDO72_RS26190 (NDO72_26190) 150754..151023 - 270 WP_004152102.1 hypothetical protein -
NDO72_RS26195 (NDO72_26195) 151381..151731 + 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
NDO72_RS26200 (NDO72_26200) 151781..152143 + 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
NDO72_RS26205 (NDO72_26205) 152161..153912 + 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
NDO72_RS26210 (NDO72_26210) 153960..155249 + 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
NDO72_RS26215 (NDO72_26215) 155262..155687 + 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
NDO72_RS26220 (NDO72_26220) 155720..156256 - 537 WP_004152096.1 GNAT family N-acetyltransferase -
NDO72_RS26225 (NDO72_26225) 156378..158128 - 1751 Protein_162 arsenical pump-driving ATPase -
NDO72_RS26230 (NDO72_26230) 158153..158515 - 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
NDO72_RS26235 (NDO72_26235) 158591..159136 - 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
NDO72_RS26240 (NDO72_26240) 159145..159858 - 714 WP_004182006.1 arsenical resistance protein ArsH -
NDO72_RS26245 (NDO72_26245) 159855..160181 - 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
NDO72_RS26250 (NDO72_26250) 160513..161010 + 498 WP_004196778.1 GNAT family N-acetyltransferase -
NDO72_RS26255 (NDO72_26255) 161060..161515 - 456 WP_016831304.1 aquaporin -
NDO72_RS26260 (NDO72_26260) 161631..163251 + 1621 Protein_169 ISL3 family transposase ISEc38 Transposase
NDO72_RS26265 (NDO72_26265) 163312..163491 + 180 WP_024623170.1 type II toxin-antitoxin system RelE/ParE family toxin -
NDO72_RS26270 (NDO72_26270) 163723..164157 - 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
NDO72_RS26275 (NDO72_26275) 164374..165774 - 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
NDO72_RS26280 (NDO72_26280) 165771..166451 - 681 WP_001188930.1 Transcriptional activator protein CopR VF
NDO72_RS26285 (NDO72_26285) 166506..167435 - 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
NDO72_RS26290 (NDO72_26290) 167440..167820 - 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
NDO72_RS26295 (NDO72_26295) 167860..168750 - 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance