MGE detailed information
MGE type: Prophage MGE length: 84801 bp
Accession: NZ_CP099809 Location: 523447..608247 Organism: Yersinia ruckeri strain NVI-10587 Replicon: chromosome
Accession: NZ_CP099809 Location: 523447..608247 Organism: Yersinia ruckeri strain NVI-10587 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNQ46_RS02230 (LNQ46_002230) | 520683..521009 | + | 327 | WP_248578695.1 | zinc ABC transporter substrate-binding protein | - |
| LNQ46_RS16980 | 521147..522793 | + | 1647 | Protein_429 | VENN motif pre-toxin domain-containing protein | - |
| LNQ46_RS02240 (LNQ46_002240) | 522793..523104 | + | 312 | WP_038251150.1 | Imm45 family immunity protein | - |
| LNQ46_RS02245 (LNQ46_002245) | 523447..524663 | + | 1217 | Protein_431 | IS3 family transposase | - |
| LNQ46_RS02250 (LNQ46_002250) | 524952..525932 | + | 981 | WP_004723346.1 | Prophage bactoprenol glucosyl transferase | VF |
| LNQ46_RS02255 (LNQ46_002255) | 525937..526656 | + | 720 | WP_004723345.1 | methyltransferase domain-containing protein | - |
| LNQ46_RS02260 (LNQ46_002260) | 527062..528456 | + | 1395 | WP_038251154.1 | hypothetical protein | - |
| LNQ46_RS02265 (LNQ46_002265) | 528800..529599 | + | 800 | Protein_435 | transposase | - |
| LNQ46_RS02270 (LNQ46_002270) | 529669..530854 | + | 1186 | Protein_436 | IS3 family transposase ISKpn37 | Transposase |
| LNQ46_RS02275 (LNQ46_002275) | 530882..531454 | - | 573 | Protein_437 | FAD-dependent oxidoreductase | - |
| LNQ46_RS02280 (LNQ46_002280) | 531459..532175 | - | 717 | WP_038251156.1 | Serine 3-dehydrogenase | VF |
| LNQ46_RS02285 (LNQ46_002285) | 532172..532606 | - | 435 | WP_004723330.1 | nuclear transport factor 2 family protein | - |
| LNQ46_RS02290 (LNQ46_002290) | 532686..532827 | - | 142 | Protein_440 | MerR family transcriptional regulator | - |
| LNQ46_RS02295 (LNQ46_002295) | 533041..533430 | - | 390 | WP_004723329.1 | SHOCT domain-containing protein | - |
| LNQ46_RS02300 (LNQ46_002300) | 534124..535440 | + | 1317 | WP_248578694.1 | Prophage integrase IntA ; Integrase | Integrase |
| LNQ46_RS02305 (LNQ46_002305) | 535445..536059 | + | 615 | WP_248578693.1 | Fic family protein | - |
| LNQ46_RS02310 (LNQ46_002310) | 536056..536202 | - | 147 | WP_248578692.1 | hypothetical protein | - |
| LNQ46_RS02315 (LNQ46_002315) | 536384..537394 | + | 1011 | WP_248578691.1 | hypothetical protein | - |
| LNQ46_RS02320 (LNQ46_002320) | 537518..537754 | + | 237 | WP_248578690.1 | AlpA family phage regulatory protein | - |
| LNQ46_RS02325 (LNQ46_002325) | 537888..539297 | + | 1410 | WP_248578689.1 | YfjI family protein | - |
| LNQ46_RS02330 (LNQ46_002330) | 539436..540062 | + | 627 | WP_248578688.1 | inovirus Gp2 family protein | - |
| LNQ46_RS02335 (LNQ46_002335) | 540165..540764 | - | 600 | WP_248578687.1 | hypothetical protein | - |
| LNQ46_RS02340 (LNQ46_002340) | 540826..541680 | - | 855 | WP_248578686.1 | DNA adenine methylase | - |
| LNQ46_RS02345 (LNQ46_002345) | 541751..543220 | - | 1470 | WP_248578685.1 | hypothetical protein | - |
| LNQ46_RS02350 (LNQ46_002350) | 543496..543693 | + | 198 | Protein_452 | 50S ribosome-binding GTPase | - |
| LNQ46_RS02355 (LNQ46_002355) | 543755..544905 | + | 1151 | WP_087931031.1 | IS3 family transposase ISSpr1 | Transposase |
| LNQ46_RS02360 (LNQ46_002360) | 544925..545215 | + | 291 | Protein_454 | JAB domain-containing protein | - |
| LNQ46_RS02365 (LNQ46_002365) | 545229..545564 | + | 336 | WP_248578840.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LNQ46_RS02370 (LNQ46_002370) | 545631..545951 | + | 321 | WP_248578805.1 | TA system toxin CbtA family protein | Toxin Detail |
| LNQ46_RS02375 (LNQ46_002375) | 546065..546898 | + | 834 | WP_248578806.1 | DUF4942 domain-containing protein | - |
| LNQ46_RS02380 (LNQ46_002380) | 547095..548174 | - | 1080 | WP_248578807.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LNQ46_RS02385 (LNQ46_002385) | 548174..548737 | - | 564 | WP_248578808.1 | PH domain-containing protein | - |
| LNQ46_RS02390 (LNQ46_002390) | 548763..549338 | - | 576 | WP_248578809.1 | phage repressor protein CI | - |
| LNQ46_RS02395 (LNQ46_002395) | 549456..549677 | + | 222 | WP_248578810.1 | regulator | - |
| LNQ46_RS02400 (LNQ46_002400) | 549709..550218 | + | 510 | WP_248578811.1 | phage regulatory CII family protein | - |
| LNQ46_RS02405 (LNQ46_002405) | 550226..550447 | + | 222 | WP_004717258.1 | DUF2724 domain-containing protein | - |
| LNQ46_RS02410 (LNQ46_002410) | 550434..550808 | + | 375 | WP_248578812.1 | hypothetical protein | - |
| LNQ46_RS02415 (LNQ46_002415) | 550818..551225 | + | 408 | WP_248578813.1 | hypothetical protein | - |
| LNQ46_RS02420 (LNQ46_002420) | 551305..551532 | + | 228 | WP_248578814.1 | DUF2732 family protein | - |
| LNQ46_RS02425 (LNQ46_002425) | 551563..551841 | + | 279 | WP_248578815.1 | DUF5405 family protein | - |
| LNQ46_RS02430 (LNQ46_002430) | 551838..553916 | + | 2079 | WP_248578816.1 | replication endonuclease | - |
| LNQ46_RS02435 (LNQ46_002435) | 554209..554529 | - | 321 | WP_248578817.1 | ogr/Delta-like zinc finger family protein | - |
| LNQ46_RS02440 (LNQ46_002440) | 554526..555554 | - | 1029 | WP_248577835.1 | phage portal protein | - |
| LNQ46_RS02445 (LNQ46_002445) | 555551..557338 | - | 1788 | WP_248578818.1 | terminase family protein | - |
| LNQ46_RS02450 (LNQ46_002450) | 557505..558353 | + | 849 | WP_071706502.1 | GPO family capsid scaffolding protein | - |
| LNQ46_RS02455 (LNQ46_002455) | 558408..559439 | + | 1032 | WP_248578819.1 | phage major capsid protein, P2 family | - |
| LNQ46_RS02460 (LNQ46_002460) | 559449..560147 | + | 699 | WP_248578820.1 | phage terminase small subunit | - |
| LNQ46_RS02465 (LNQ46_002465) | 560241..560693 | + | 453 | WP_120806982.1 | head completion/stabilization protein | - |
| LNQ46_RS02470 (LNQ46_002470) | 560690..561178 | + | 489 | WP_248578821.1 | phage tail protein | - |
| LNQ46_RS02475 (LNQ46_002475) | 561178..561849 | + | 672 | WP_248577830.1 | phage virion morphogenesis protein | - |
| LNQ46_RS02480 (LNQ46_002480) | 561882..563015 | + | 1134 | WP_071706566.1 | DUF2586 domain-containing protein | - |
| LNQ46_RS02485 (LNQ46_002485) | 563012..563467 | + | 456 | WP_071706567.1 | DUF2597 family protein | - |
| LNQ46_RS02490 (LNQ46_002490) | 563477..563764 | + | 288 | WP_071706568.1 | phage holin family protein | - |
| LNQ46_RS02495 (LNQ46_002495) | 563764..564105 | + | 342 | WP_248578822.1 | M15 family metallopeptidase | - |
| LNQ46_RS02500 (LNQ46_002500) | 564105..564455 | + | 351 | WP_248578823.1 | hypothetical protein | - |
| LNQ46_RS02505 (LNQ46_002505) | 564379..564594 | + | 216 | WP_081365112.1 | hypothetical protein | - |
| LNQ46_RS02510 (LNQ46_002510) | 564596..564862 | + | 267 | WP_071708345.1 | putative phage tail assembly chaperone | - |
| LNQ46_RS02515 (LNQ46_002515) | 565050..567062 | + | 2013 | WP_248578824.1 | phage tail tape measure protein | - |
| LNQ46_RS02520 (LNQ46_002520) | 567063..567395 | + | 333 | WP_071706563.1 | DUF2590 family protein | - |
| LNQ46_RS02525 (LNQ46_002525) | 567388..568572 | + | 1185 | WP_248578825.1 | baseplate J/gp47 family protein | - |
| LNQ46_RS02530 (LNQ46_002530) | 568565..569170 | + | 606 | WP_071708341.1 | hypothetical protein | - |
| LNQ46_RS02535 (LNQ46_002535) | 569173..571245 | + | 2073 | WP_248578826.1 | phage tail protein | - |
| LNQ46_RS02540 (LNQ46_002540) | 571250..571600 | + | 351 | WP_071706570.1 | tail fiber assembly protein | - |
| LNQ46_RS02545 (LNQ46_002545) | 571597..572331 | + | 735 | WP_248578827.1 | hypothetical protein | - |
| LNQ46_RS02550 (LNQ46_002550) | 572297..572830 | + | 534 | WP_248578828.1 | hypothetical protein | - |
| LNQ46_RS02555 (LNQ46_002555) | 572836..574491 | + | 1656 | WP_248577821.1 | hypothetical protein | - |
| LNQ46_RS02560 (LNQ46_002560) | 575082..575636 | + | 555 | WP_248578829.1 | hypothetical protein | - |
| LNQ46_RS02570 (LNQ46_002570) | 576115..577956 | - | 1842 | WP_004723328.1 | RNA polymerase sigma factor RpoD | - |
| LNQ46_RS02575 (LNQ46_002575) | 578113..579861 | - | 1749 | WP_004723327.1 | DNA primase | - |
| LNQ46_RS02580 (LNQ46_002580) | 579996..580211 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| LNQ46_RS02585 (LNQ46_002585) | 580604..581617 | + | 1014 | WP_038244918.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| LNQ46_RS02590 (LNQ46_002590) | 581913..582560 | - | 648 | WP_004721063.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| LNQ46_RS02595 (LNQ46_002595) | 582668..583027 | + | 360 | WP_004721060.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| LNQ46_RS02600 (LNQ46_002600) | 583189..584013 | + | 825 | WP_145497111.1 | undecaprenyl-diphosphate phosphatase | - |
| LNQ46_RS02605 (LNQ46_002605) | 584129..585376 | - | 1248 | WP_145497110.1 | multifunctional CCA addition/repair protein | - |
| LNQ46_RS02610 (LNQ46_002610) | 585519..586139 | - | 621 | WP_038244914.1 | TIGR04211 family SH3 domain-containing protein | - |
| LNQ46_RS02615 (LNQ46_002615) | 586456..587766 | + | 1311 | WP_145497109.1 | inorganic triphosphatase | - |
| LNQ46_RS02620 (LNQ46_002620) | 587987..590821 | + | 2835 | WP_038244910.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| LNQ46_RS02625 (LNQ46_002625) | 591105..592535 | + | 1431 | WP_038276261.1 | Bifunctional protein HldE | VF |
| LNQ46_RS02630 (LNQ46_002630) | 592949..593239 | - | 291 | WP_004721042.1 | accessory factor UbiK family protein | - |
| LNQ46_RS02635 (LNQ46_002635) | 593668..594321 | + | 654 | WP_248578830.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| LNQ46_RS02640 (LNQ46_002640) | 594584..595366 | + | 783 | WP_145497106.1 | 4,5-DOPA dioxygenase extradiol | - |
| LNQ46_RS02645 (LNQ46_002645) | 595433..596593 | - | 1161 | WP_004721034.1 | glutathionylspermidine synthase family protein | - |
| LNQ46_RS02650 (LNQ46_002650) | 596604..597293 | - | 690 | WP_038244950.1 | DUF1190 family protein | - |
| LNQ46_RS02655 (LNQ46_002655) | 597571..599037 | - | 1467 | WP_038244905.1 | outer membrane channel protein TolC | - |
| LNQ46_RS02660 (LNQ46_002660) | 599365..600003 | + | 639 | WP_004721025.1 | ADP-ribose diphosphatase | - |
| LNQ46_RS02665 (LNQ46_002665) | 599996..600421 | + | 426 | WP_038244903.1 | DUF1249 family protein | - |
| LNQ46_RS02670 (LNQ46_002670) | 600446..601273 | + | 828 | WP_038244900.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| LNQ46_RS02675 (LNQ46_002675) | 601273..601854 | + | 582 | WP_038244897.1 | esterase YqiA | - |
| LNQ46_RS02680 (LNQ46_002680) | 601954..603849 | + | 1896 | WP_004721020.1 | DNA topoisomerase IV subunit B | - |
| LNQ46_RS02685 (LNQ46_002685) | 603997..604908 | + | 912 | WP_248578831.1 | HTH-type transcriptional regulator DmlR | VF |
| LNQ46_RS02690 (LNQ46_002690) | 604999..605583 | - | 585 | WP_248578832.1 | NAD(P)H-dependent oxidoreductase | - |
| LNQ46_RS02695 (LNQ46_002695) | 605974..608247 | + | 2274 | WP_004721016.1 | DNA topoisomerase IV subunit A | - |
| LNQ46_RS02700 (LNQ46_002700) | 608470..609204 | + | 735 | WP_038244892.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| LNQ46_RS02705 (LNQ46_002705) | 609356..610789 | + | 1434 | WP_004721013.1 | cell division protein FtsP | - |
| LNQ46_RS02710 (LNQ46_002710) | 611005..613227 | + | 2223 | WP_038276258.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|