MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 61276 bp
Accession: NZ_CP099736 Location: 1..61276 Organism: Photobacterium sp. TY1-4 Replicon: plasmid unnamed1
Accession: NZ_CP099736 Location: 1..61276 Organism: Photobacterium sp. TY1-4 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NH461_RS25360 (NH461_25285) | 1..1080 | + | 1080 | WP_261604667.1 | replication initiation protein | - |
| NH461_RS25365 (NH461_25290) | 1770..2969 | + | 1200 | WP_261604668.1 | AAA family ATPase | - |
| NH461_RS25370 (NH461_25295) | 2978..3946 | + | 969 | WP_261604669.1 | ParB family protein | - |
| NH461_RS25375 (NH461_25300) | 4013..5233 | - | 1221 | WP_261604670.1 | PD-(D/E)XK nuclease family protein | - |
| NH461_RS25380 (NH461_25305) | 5779..7425 | + | 1647 | WP_261604671.1 | hypothetical protein | - |
| NH461_RS25385 (NH461_25310) | 7561..7812 | + | 252 | WP_261604672.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NH461_RS25390 (NH461_25315) | 7813..9120 | + | 1308 | WP_261604673.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| NH461_RS25395 (NH461_25320) | 9287..10249 | - | 963 | WP_261604674.1 | reverse transcriptase family protein | - |
| NH461_RS25400 (NH461_25325) | 10407..11144 | - | 738 | WP_261604675.1 | hypothetical protein | - |
| NH461_RS25405 (NH461_25330) | 11137..11637 | - | 501 | WP_261604676.1 | hypothetical protein | - |
| NH461_RS25410 (NH461_25335) | 12121..12942 | - | 822 | WP_261604677.1 | DUF2182 domain-containing protein | - |
| NH461_RS25415 (NH461_25340) | 12994..14493 | - | 1500 | WP_261604678.1 | tyrosinase family protein | - |
| NH461_RS25420 (NH461_25345) | 15120..16139 | + | 1020 | WP_261604679.1 | hypothetical protein | - |
| NH461_RS25425 (NH461_25350) | 16412..17587 | - | 1176 | WP_261604680.1 | Xaa-Pro peptidase family protein | - |
| NH461_RS25430 (NH461_25355) | 17666..19006 | - | 1341 | WP_261604681.1 | TRAP transporter large permease | - |
| NH461_RS25435 (NH461_25360) | 19003..19545 | - | 543 | WP_261604682.1 | TRAP transporter small permease | - |
| NH461_RS25440 (NH461_25365) | 19710..20747 | - | 1038 | WP_261604683.1 | TRAP transporter substrate-binding protein DctP | - |
| NH461_RS25445 (NH461_25370) | 20834..22015 | - | 1182 | WP_261604684.1 | M20 aminoacylase family protein | - |
| NH461_RS25450 (NH461_25375) | 22042..22848 | - | 807 | WP_261604685.1 | Asp/Glu racemase | - |
| NH461_RS25455 (NH461_25380) | 23180..23671 | + | 492 | WP_261604686.1 | Lrp/AsnC family transcriptional regulator | - |
| NH461_RS25460 (NH461_25385) | 23788..24981 | - | 1194 | WP_261604687.1 | diaminopropionate ammonia-lyase | - |
| NH461_RS25465 (NH461_25390) | 25178..25696 | - | 519 | WP_261604688.1 | metal-dependent hydrolase | - |
| NH461_RS25470 (NH461_25395) | 25693..26391 | - | 699 | WP_261604693.1 | hypothetical protein | - |
| NH461_RS25475 (NH461_25400) | 26534..27256 | - | 723 | WP_261604689.1 | hypothetical protein | - |
| NH461_RS25480 (NH461_25405) | 28403..29095 | - | 693 | WP_261604690.1 | hypothetical protein | - |
| NH461_RS25485 (NH461_25410) | 29565..30161 | + | 597 | WP_261604691.1 | recombinase family protein | - |
| NH461_RS25490 (NH461_25415) | 30333..30872 | + | 540 | WP_261604692.1 | M15 family metallopeptidase | - |
| NH461_RS25495 (NH461_25420) | 30928..32169 | + | 1242 | WP_261604645.1 | hypothetical protein | - |
| NH461_RS25500 (NH461_25425) | 33139..33804 | + | 666 | WP_261604646.1 | hypothetical protein | - |
| NH461_RS25505 (NH461_25430) | 33801..34070 | + | 270 | WP_261604647.1 | hypothetical protein | - |
| NH461_RS25510 (NH461_25435) | 34080..35144 | + | 1065 | WP_261604648.1 | hypothetical protein | - |
| NH461_RS25515 (NH461_25440) | 35279..36487 | - | 1209 | WP_261600374.1 | IS256 family transposase ISSod5 | Transposase |
| NH461_RS25520 (NH461_25445) | 37085..37288 | + | 204 | WP_261604649.1 | hypothetical protein | - |
| NH461_RS25525 (NH461_25450) | 37686..39158 | + | 1473 | WP_261604650.1 | hypothetical protein | VF |
| NH461_RS25530 (NH461_25455) | 39516..39635 | + | 120 | Protein_34 | DUF4113 domain-containing protein | - |
| NH461_RS25535 (NH461_25460) | 39881..41287 | + | 1407 | WP_261604651.1 | hypothetical protein | - |
| NH461_RS25540 (NH461_25465) | 41679..42290 | + | 612 | WP_261604652.1 | hypothetical protein | - |
| NH461_RS25545 (NH461_25470) | 42391..43422 | + | 1032 | WP_261604653.1 | IS630 family transposase ISSen5 | Transposase |
| NH461_RS25550 (NH461_25475) | 43463..43762 | - | 300 | Protein_38 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NH461_RS25555 (NH461_25480) | 43781..44740 | - | 960 | WP_261604654.1 | Abi family protein | - |
| NH461_RS25560 (NH461_25485) | 44975..45079 | - | 105 | Protein_40 | helix-turn-helix transcriptional regulator | - |
| NH461_RS25565 (NH461_25490) | 45253..46869 | + | 1617 | WP_261604655.1 | hypothetical protein | - |
| NH461_RS25570 (NH461_25495) | 46905..47411 | + | 507 | WP_261604656.1 | hypothetical protein | - |
| NH461_RS25575 (NH461_25500) | 47620..48015 | + | 396 | Protein_43 | DUF4113 domain-containing protein | - |
| NH461_RS25580 (NH461_25505) | 48255..49943 | + | 1689 | WP_261604657.1 | ISNCY family transposase ISPa4 | Transposase |
| NH461_RS25585 (NH461_25510) | 49997..51205 | - | 1209 | WP_261600374.1 | IS256 family transposase ISSod5 | Transposase |
| NH461_RS25590 (NH461_25515) | 51306..51941 | - | 636 | WP_261604658.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NH461_RS25595 (NH461_25520) | 52513..54003 | - | 1491 | WP_261604659.1 | GntP family permease | - |
| NH461_RS25600 (NH461_25525) | 54003..54971 | - | 969 | WP_261604660.1 | SDR family oxidoreductase | - |
| NH461_RS25605 (NH461_25530) | 55011..55787 | - | 777 | WP_261604661.1 | hydroxypyruvate isomerase family protein | - |
| NH461_RS25610 (NH461_25535) | 55787..56419 | - | 633 | WP_261604662.1 | aldolase | - |
| NH461_RS25615 (NH461_25540) | 56412..57671 | - | 1260 | WP_261604663.1 | four-carbon acid sugar kinase family protein | - |
| NH461_RS25620 (NH461_25545) | 57677..58573 | - | 897 | WP_261604664.1 | NAD(P)-dependent oxidoreductase | - |
| NH461_RS25625 (NH461_25550) | 58854..59612 | + | 759 | WP_261604665.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| NH461_RS25630 (NH461_25555) | 59668..60657 | - | 990 | WP_261604666.1 | sensor domain-containing diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|