MGE detailed information
MGE type: Genomic_island MGE length: 16302 bp
Accession: NZ_CP099721 Location: 4150437..4166738 Organism: Escherichia coli strain EC21GDE043 Replicon: chromosome
Accession: NZ_CP099721 Location: 4150437..4166738 Organism: Escherichia coli strain EC21GDE043 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NH569_RS20350 (4145916) | 4145916..4146419 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| NH569_RS20355 (4146432) | 4146432..4146962 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| NH569_RS20360 (4146972) | 4146972..4149608 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| NH569_RS20365 (4149675) | 4149675..4150400 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NH569_RS20370 (4150437) | 4150437..4150976 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| NH569_RS20375 (4151041) | 4151041..4151589 | - | 549 | WP_000695592.1 | Type-1 fimbrial protein, A chain | VF |
| NH569_RS20380 (4152072) | 4152072..4152668 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| NH569_RS20385 (4153145) | 4153145..4153747 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NH569_RS20390 (4155203) | 4155203..4155919 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NH569_RS20395 (4155939) | 4155939..4157045 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NH569_RS20400 (4157110) | 4157110..4158090 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NH569_RS20405 (4158200) | 4158200..4158405 | + | 206 | Protein_3993 | HNH endonuclease | - |
| NH569_RS20410 (4158673) | 4158673..4159913 | - | 1241 | Protein_3994 | helicase YjhR | - |
| NH569_RS20415 (4160029) | 4160029..4160160 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NH569_RS20420 (4160651) | 4160651..4160908 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NH569_RS20425 (4160920) | 4160920..4161465 | + | 546 | WP_001350781.1 | N-acetyltransferase | Antitoxin Detail |
| NH569_RS20430 (4161521) | 4161521..4162267 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NH569_RS20435 (4162436) | 4162436..4162654 | + | 219 | Protein_3999 | hypothetical protein | - |
| NH569_RS20440 (4162692) | 4162692..4162808 | + | 117 | Protein_4000 | VOC family protein | - |
| NH569_RS20445 (4163053) | 4163053..4163904 | + | 852 | Protein_4001 | M42 family peptidase | - |
| NH569_RS20450 (4163960) | 4163960..4165173 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| NH569_RS20455 (4165511) | 4165511..4165792 | - | 282 | WP_223349491.1 | biofilm development regulator YmgB/AriR family protein | - |
| NH569_RS20460 (4166107) | 4166107..4166211 | - | 105 | Protein_4004 | IS3 family transposase | - |
| NH569_RS20465 (4166256) | 4166256..4166387 | - | 132 | Protein_4005 | IS3 family transposase | - |
| NH569_RS20470 (4166456) | 4166456..4166518 | + | 63 | WP_113705808.1 | hypothetical protein | - |
| NH569_RS20475 (4166529) | 4166529..4167226 | - | 698 | Protein_4007 | IS1 family transposase | - |
| NH569_RS20480 (4167313) | 4167313..4167381 | - | 69 | WP_211180522.1 | protein YkiE | - |
| NH569_RS20485 (4167518) | 4167518..4168039 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| NH569_RS20490 (4168036) | 4168036..4168989 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| NH569_RS20495 (4169076) | 4169076..4171400 | + | 2325 | WP_000188262.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|