MGE detailed information
MGE type: Genomic_island MGE length: 20354 bp
Accession: NZ_CP099721 Location: 3710852..3731205 Organism: Escherichia coli strain EC21GDE043 Replicon: chromosome
Accession: NZ_CP099721 Location: 3710852..3731205 Organism: Escherichia coli strain EC21GDE043 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NH569_RS18135 (3706217) | 3706217..3706675 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| NH569_RS18140 (3706936) | 3706936..3708393 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| NH569_RS18145 (3708450) | 3708450..3709064 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| NH569_RS18150 (3709061) | 3709061..3710200 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| NH569_RS18155 (3710390) | 3710390..3710842 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| NH569_RS18160 (3710852) | 3710852..3711250 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| NH569_RS18165 (3711253) | 3711253..3711546 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| NH569_RS18170 (3711598) | 3711598..3712653 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| NH569_RS18175 (3712724) | 3712724..3713509 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| NH569_RS18180 (3713481) | 3713481..3715193 | + | 1713 | Protein_3558 | Flagellar biosynthesis protein FlhA | VF |
| NH569_RS18185 (3715272) | 3715272..3715430 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| NH569_RS18190 (3715513) | 3715513..3716010 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| NH569_RS18195 (3716186) | 3716186..3716935 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| NH569_RS18200 (3717247) | 3717247..3717987 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NH569_RS18205 (3717958) | 3717958..3718725 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| NH569_RS18210 (3718930) | 3718930..3719508 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NH569_RS18215 (3719748) | 3719748..3722192 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| NH569_RS18220 (3722235) | 3722235..3722681 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NH569_RS18225 (3722862) | 3722862..3723632 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| NH569_RS18230 (3723683) | 3723683..3723877 | - | 195 | Protein_3568 | ISAs1 family transposase | - |
| NH569_RS18235 (3723903) | 3723903..3724391 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| NH569_RS18240 (3724602) | 3724602..3724988 | - | 387 | WP_001513602.1 | hypothetical protein | - |
| NH569_RS18245 (3725217) | 3725217..3725981 | - | 765 | Protein_3571 | ISAs1 family transposase ISEc1 | Transposase |
| NH569_RS18250 (3726239) | 3726239..3726529 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| NH569_RS18255 (3726504) | 3726504..3727943 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| NH569_RS18260 (3727936) | 3727936..3728982 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| NH569_RS18265 (3729089) | 3729089..3731070 | - | 1982 | Protein_3575 | Actin cross-linking toxin VgrG1 | VF |
| NH569_RS18270 (3731291) | 3731291..3731809 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| NH569_RS18275 (3732523) | 3732523..3733026 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| NH569_RS18280 (3733049) | 3733049..3734533 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| NH569_RS18285 (3734538) | 3734538..3734963 | + | 426 | WP_167817983.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|