MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83927 bp
Accession: NZ_CP099648 Location: 1..83927 Organism: Paraburkholderia fungorum strain OTU2SAUBB1 Replicon: plasmid unnamed4
Accession: NZ_CP099648 Location: 1..83927 Organism: Paraburkholderia fungorum strain OTU2SAUBB1 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHH62_RS40740 (NHH62_40740) | 519..659 | + | 141 | WP_167346776.1 | hypothetical protein | - |
| NHH62_RS40745 (NHH62_40745) | 779..2437 | + | 1659 | WP_046565566.1 | divalent metal cation transporter | - |
| NHH62_RS40750 (NHH62_40750) | 2601..3308 | + | 708 | WP_046565086.1 | Protein MgtC | VF |
| NHH62_RS40755 (NHH62_40755) | 3357..3572 | - | 216 | WP_082094218.1 | DUF1289 domain-containing protein | - |
| NHH62_RS40760 (NHH62_40760) | 3576..4862 | - | 1287 | WP_046565083.1 | CDF family Co(II)/Ni(II) efflux transporter DmeF | - |
| NHH62_RS40765 (NHH62_40765) | 4871..5146 | - | 276 | WP_046565081.1 | metal/formaldehyde-sensitive transcriptional repressor | - |
| NHH62_RS40770 (NHH62_40770) | 5513..8446 | - | 2934 | WP_046565079.1 | Tn3 family transposase TnpA_ISBusp1 | Transposase |
| NHH62_RS40775 (NHH62_40775) | 8996..9535 | - | 540 | WP_253045759.1 | hypothetical protein | - |
| NHH62_RS40780 (NHH62_40780) | 9846..10238 | - | 393 | Protein_8 | SOS response-associated peptidase | - |
| NHH62_RS40785 (NHH62_40785) | 10319..10624 | + | 306 | WP_028199952.1 | hypothetical protein | - |
| NHH62_RS40790 (NHH62_40790) | 10624..11805 | + | 1182 | WP_028199951.1 | tyrosine-type recombinase/integrase | - |
| NHH62_RS40795 (NHH62_40795) | 11774..13447 | + | 1674 | WP_028199950.1 | hypothetical protein | - |
| NHH62_RS40800 (NHH62_40800) | 13444..15318 | + | 1875 | WP_028199949.1 | hypothetical protein | - |
| NHH62_RS40805 (NHH62_40805) | 15315..15719 | + | 405 | WP_028199948.1 | hypothetical protein | - |
| NHH62_RS40810 (NHH62_40810) | 15742..16539 | + | 798 | WP_127837873.1 | hypothetical protein | - |
| NHH62_RS40815 (NHH62_40815) | 16662..17366 | - | 705 | WP_253045761.1 | hypothetical protein | - |
| NHH62_RS40820 (NHH62_40820) | 17628..17939 | - | 312 | WP_253045763.1 | hypothetical protein | - |
| NHH62_RS40825 (NHH62_40825) | 18342..19049 | + | 708 | WP_253045799.1 | ParA family protein | - |
| NHH62_RS40830 (NHH62_40830) | 19046..19378 | + | 333 | WP_253045765.1 | hypothetical protein | - |
| NHH62_RS40835 (NHH62_40835) | 19439..19819 | + | 381 | WP_253045766.1 | hypothetical protein | - |
| NHH62_RS40840 (NHH62_40840) | 20059..20556 | + | 498 | WP_253045767.1 | molybdopterin-dependent oxidoreductase | - |
| NHH62_RS40845 (NHH62_40845) | 20553..22349 | + | 1797 | WP_253045768.1 | Sensor histidine kinase RcsC | VF |
| NHH62_RS40850 (NHH62_40850) | 22373..23416 | + | 1044 | WP_253045769.1 | glycosyltransferase family 9 protein | - |
| NHH62_RS40855 (NHH62_40855) | 23413..24270 | - | 858 | WP_253045770.1 | helix-turn-helix domain-containing protein | - |
| NHH62_RS40860 (NHH62_40860) | 24480..24881 | + | 402 | WP_253045771.1 | mating pair formation protein | - |
| NHH62_RS40865 (NHH62_40865) | 24891..25175 | + | 285 | WP_091810183.1 | VirB3 family type IV secretion system protein | - |
| NHH62_RS40870 (NHH62_40870) | 25306..27681 | + | 2376 | WP_253045772.1 | Type IV secretion system protein virB4 | VF |
| NHH62_RS40875 (NHH62_40875) | 27979..28629 | + | 651 | WP_253045774.1 | type IV secretion system protein | - |
| NHH62_RS40880 (NHH62_40880) | 29256..30218 | + | 963 | WP_253045775.1 | type IV secretion system protein | - |
| NHH62_RS40885 (NHH62_40885) | 30212..30919 | + | 708 | WP_253045777.1 | type IV secretion system protein | - |
| NHH62_RS40890 (NHH62_40890) | 30963..31331 | + | 369 | WP_253045778.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NHH62_RS40895 (NHH62_40895) | 31349..32125 | + | 777 | WP_253045780.1 | Type IV secretion system protein virB9 | VF |
| NHH62_RS40900 (NHH62_40900) | 32122..33375 | + | 1254 | WP_253045782.1 | hypothetical protein | VF |
| NHH62_RS40905 (NHH62_40905) | 33372..33635 | + | 264 | WP_253045784.1 | hypothetical protein | - |
| NHH62_RS40910 (NHH62_40910) | 33637..34647 | + | 1011 | WP_253045786.1 | Type IV secretion system protein VirB11 | VF |
| NHH62_RS40915 (NHH62_40915) | 34634..35404 | + | 771 | WP_253045787.1 | hypothetical protein | VF |
| NHH62_RS40920 (NHH62_40920) | 35394..35735 | + | 342 | WP_253045789.1 | hypothetical protein | - |
| NHH62_RS40925 (NHH62_40925) | 35732..36385 | + | 654 | WP_253045790.1 | hypothetical protein | - |
| NHH62_RS40930 (NHH62_40930) | 36608..37207 | + | 600 | WP_253045792.1 | Phospholipase D | VF |
| NHH62_RS40935 (NHH62_40935) | 37219..38682 | + | 1464 | WP_253045793.1 | hypothetical protein | - |
| NHH62_RS40940 (NHH62_40940) | 38685..40340 | + | 1656 | WP_253045795.1 | type IV secretion system DNA-binding domain-containing protein | - |
| NHH62_RS40945 (NHH62_40945) | 40337..40867 | + | 531 | WP_253045796.1 | PH domain-containing protein | - |
| NHH62_RS40950 (NHH62_40950) | 40883..42187 | + | 1305 | WP_253045797.1 | DUF1173 domain-containing protein | - |
| NHH62_RS40955 (NHH62_40955) | 42375..43079 | - | 705 | WP_253045722.1 | replication initiation protein | - |
| NHH62_RS40960 (NHH62_40960) | 44004..46832 | - | 2829 | WP_253045723.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| NHH62_RS40965 (NHH62_40965) | 47054..47536 | + | 483 | WP_253045724.1 | conjugal transfer protein TraD | - |
| NHH62_RS40970 (NHH62_40970) | 47807..49795 | - | 1989 | WP_253045725.1 | ParB N-terminal domain-containing protein | - |
| NHH62_RS40975 (NHH62_40975) | 49892..50464 | - | 573 | WP_007180433.1 | hypothetical protein | - |
| NHH62_RS40980 (NHH62_40980) | 50541..50804 | - | 264 | WP_007180432.1 | hypothetical protein | - |
| NHH62_RS40985 (NHH62_40985) | 50801..51103 | - | 303 | WP_007180431.1 | hypothetical protein | - |
| NHH62_RS40990 (NHH62_40990) | 51160..54186 | - | 3027 | WP_007181927.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| NHH62_RS40995 (NHH62_40995) | 54330..56021 | + | 1692 | WP_007180429.1 | site-specific integrase | - |
| NHH62_RS41000 (NHH62_41000) | 56372..56785 | + | 414 | WP_253045726.1 | antirestriction protein | - |
| NHH62_RS41005 (NHH62_41005) | 56854..57168 | + | 315 | WP_253045727.1 | hypothetical protein | - |
| NHH62_RS41010 (NHH62_41010) | 57165..57359 | + | 195 | WP_253045728.1 | hypothetical protein | - |
| NHH62_RS41015 (NHH62_41015) | 57403..57627 | + | 225 | WP_253045729.1 | DUF3717 domain-containing protein | - |
| NHH62_RS41020 (NHH62_41020) | 58112..58651 | + | 540 | WP_253045730.1 | hypothetical protein | - |
| NHH62_RS41025 (NHH62_41025) | 58671..58991 | + | 321 | WP_253045732.1 | XRE family transcriptional regulator | - |
| NHH62_RS41030 (NHH62_41030) | 59290..60135 | - | 846 | WP_253045800.1 | glycosyltransferase family 2 protein | - |
| NHH62_RS41035 (NHH62_41035) | 60556..64029 | - | 3474 | WP_253045733.1 | glycosyltransferase | - |
| NHH62_RS41040 (NHH62_41040) | 64026..65417 | - | 1392 | WP_253045734.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NHH62_RS41045 (NHH62_41045) | 65407..66255 | - | 849 | WP_253045735.1 | ABC transporter permease | - |
| NHH62_RS41050 (NHH62_41050) | 66242..67504 | - | 1263 | WP_253045736.1 | glycosyltransferase | - |
| NHH62_RS41055 (NHH62_41055) | 67501..68658 | - | 1158 | WP_253045738.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| NHH62_RS41060 (NHH62_41060) | 68819..69499 | - | 681 | WP_253045740.1 | hypothetical protein | - |
| NHH62_RS41065 (NHH62_41065) | 69677..70648 | - | 972 | WP_253045742.1 | tyrosine-type recombinase/integrase | - |
| NHH62_RS41070 (NHH62_41070) | 70666..70857 | - | 192 | WP_253045743.1 | hypothetical protein | - |
| NHH62_RS41075 (NHH62_41075) | 71115..72008 | + | 894 | WP_253045745.1 | DNA-binding protein | - |
| NHH62_RS41080 (NHH62_41080) | 72039..72758 | + | 720 | WP_253045747.1 | hypothetical protein | - |
| NHH62_RS41085 (NHH62_41085) | 72857..73165 | + | 309 | WP_253045749.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NHH62_RS41090 (NHH62_41090) | 73162..73452 | + | 291 | WP_253045751.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NHH62_RS41095 (NHH62_41095) | 73476..74183 | + | 708 | WP_253045753.1 | ATP-binding protein | - |
| NHH62_RS41100 (NHH62_41100) | 74231..74743 | + | 513 | WP_253045755.1 | hypothetical protein | - |
| NHH62_RS41105 (NHH62_41105) | 74769..76085 | + | 1317 | WP_253045757.1 | IS701 family transposase ISRso17 | Transposase |
| NHH62_RS41110 (NHH62_41110) | 76765..77322 | + | 558 | WP_046565095.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| NHH62_RS41115 (NHH62_41115) | 77663..78634 | + | 972 | WP_046565570.1 | magnesium/cobalt transporter CorA | - |
| NHH62_RS41120 (NHH62_41120) | 78866..79216 | - | 351 | WP_137954095.1 | hypothetical protein | - |
| NHH62_RS41125 (NHH62_41125) | 79331..79713 | - | 383 | Protein_77 | carbohydrate porin | - |
| NHH62_RS41130 (NHH62_41130) | 80071..81198 | - | 1128 | WP_046565091.1 | VIT1/CCC1 transporter family protein | - |
| NHH62_RS41135 (NHH62_41135) | 81376..82890 | - | 1515 | WP_046565088.1 | carbohydrate porin | - |
| NHH62_RS41140 (NHH62_41140) | 82984..83409 | - | 426 | WP_149029638.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|